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NPDC1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56654 neural proliferation, differentiation and control, 1 chr9 - 139940176 - 139945676 139940676 Transcription Factor Binding Sites   Download all TFBS in the NPDC1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 139941149 139941167 1.0E-06 AGGCCACCAGGGGGCAAGA 19 CTCF_MA0139.1 JASPAR + 139944438 139944456 3.0E-06 AGGCCTGTAGGGGGCGCAG 19 RFX4_RFX_DBD_dimeric_16_1 SELEX + 139935774 139935789 2.0E-06 GATTGCCATGGTGACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 139935774 139935789 5.0E-06 TGTCACCATGGCAATC 16 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 139941065 139941076 7.0E-06 GCTTTTCCCGCG 12 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 139941147 139941164 8.0E-06 TGAGGCCACCAGGGGGCA 18 Pax4_MA0068.1 JASPAR - 139941251 139941280 4.0E-06 GAAAAAAAAAAAAAAAGATGCCCATTGTCC 30 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 139935774 139935789 4.0E-06 GATTGCCATGGTGACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 139935774 139935789 3.0E-06 TGTCACCATGGCAATC 16 SP1_MA0079.2 JASPAR + 139940717 139940726 3.0E-06 CCCCTCCCCC 10 HIC2_C2H2_DBD_monomeric_9_1 SELEX + 139939305 139939313 1.0E-05 ATGCCCACC 9 ELK1_ETS_full_dimeric_17_1 SELEX + 139940054 139940070 7.0E-06 CGCTCCCGGCGGAAGAA 17 ELK1_ETS_full_dimeric_17_1 SELEX - 139940054 139940070 3.0E-06 TTCTTCCGCCGGGAGCG 17 CTCF_C2H2_full_monomeric_17_1 SELEX - 139944439 139944455 3.0E-06 TGCGCCCCCTACAGGCC 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 139935774 139935789 2.0E-06 GATTGCCATGGTGACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 139935774 139935789 3.0E-06 TGTCACCATGGCAATC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 139935774 139935789 5.0E-06 GATTGCCATGGTGACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 139935774 139935789 2.0E-06 TGTCACCATGGCAATC 16 REST_MA0138.2 JASPAR - 139941198 139941218 0.0E+00 CTGAACACCTTGGACAGCTCC 21 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 139941265 139941277 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 139941266 139941278 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 139941267 139941279 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 139941268 139941280 5.0E-06 GAAAAAAAAAAAA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 139941267 139941280 8.0E-06 GAAAAAAAAAAAAA 14 V_FOXP1_01_M00987 TRANSFAC + 139941262 139941281 3.0E-06 ATCTTTTTTTTTTTTTTTCT 20 V_FOXP1_01_M00987 TRANSFAC + 139941263 139941282 5.0E-06 TCTTTTTTTTTTTTTTTCTT 20 V_STAT5A_Q6_M01890 TRANSFAC - 139940817 139940829 7.0E-06 GGACTTCTGGGAA 13 V_TCF3_01_M01594 TRANSFAC + 139941263 139941275 7.0E-06 TCTTTTTTTTTTT 13 V_MYOD_Q6_M00184 TRANSFAC - 139940992 139941001 2.0E-06 AGCACCTGTC 10 V_TCFE2A_04_M02927 TRANSFAC + 139940015 139940031 1.0E-06 AGAGCCAGATGGCCGCG 17 V_OSF2_Q6_M00731 TRANSFAC + 139944734 139944741 1.0E-05 ACCACAAA 8 V_ZFX_01_M01593 TRANSFAC - 139940297 139940312 0.0E+00 GCGCAGGCCGCGGGGC 16 V_EVI1_04_M00081 TRANSFAC - 139941265 139941279 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 139941266 139941280 8.0E-06 GAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 139941267 139941281 3.0E-06 AGAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 139941261 139941276 5.0E-06 CATCTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 139941263 139941278 9.0E-06 TCTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 139941264 139941279 2.0E-06 CTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 139941268 139941283 0.0E+00 TTTTTTTTTTTTCTTT 16 V_NFMUE1_Q6_M00651 TRANSFAC - 139940021 139940029 6.0E-06 CGGCCATCT 9 V_HNF3_Q6_01_M01012 TRANSFAC - 139941069 139941086 6.0E-06 TCCTGTATTTGCTTTTCC 18 V_SP1_03_M02281 TRANSFAC + 139940717 139940726 3.0E-06 CCCCTCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 139941072 139941084 9.0E-06 CTGTATTTGCTTT 13 V_PU1_Q4_M01172 TRANSFAC - 139940576 139940594 9.0E-06 CCTTTCCTCTTCCTCCTCC 19 V_TCFAP2E_04_M02926 TRANSFAC - 139941263 139941276 6.0E-06 AAAAAAAAAAAAGA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941264 139941277 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941265 139941278 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941266 139941279 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941267 139941280 3.0E-06 GAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941268 139941281 4.0E-06 AGAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941269 139941282 2.0E-06 AAGAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941270 139941283 1.0E-06 AAAGAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941271 139941284 2.0E-06 CAAAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 139941272 139941285 2.0E-06 TCAAAGAAAAAAAA 14 V_STAT4_Q4_M01666 TRANSFAC + 139940817 139940830 3.0E-06 TTCCCAGAAGTCCG 14 V_ELF4_04_M02850 TRANSFAC - 139941265 139941281 4.0E-06 AGAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 139941266 139941282 6.0E-06 AAGAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 139941271 139941287 7.0E-06 TCTCAAAGAAAAAAAAA 17 V_TAL1_Q6_M00993 TRANSFAC - 139939017 139939026 3.0E-06 TCCAGCTGCT 10 V_ZFP128_03_M02828 TRANSFAC - 139940080 139940096 7.0E-06 CCAGAGGCGTACCTTAC 17 V_ZFP105_03_M02827 TRANSFAC - 139941262 139941276 0.0E+00 AAAAAAAAAAAAGAT 15 V_ZFP105_03_M02827 TRANSFAC - 139941263 139941277 1.0E-06 AAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC - 139941264 139941278 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 139941265 139941279 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 139941266 139941280 1.0E-06 GAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 139941267 139941281 1.0E-06 AGAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 139941268 139941282 2.0E-06 AAGAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 139941269 139941283 9.0E-06 AAAGAAAAAAAAAAA 15 V_SOX8_04_M02912 TRANSFAC - 139940068 139940081 7.0E-06 ACATTCATGGCTTC 14 V_KROX_Q6_M00982 TRANSFAC + 139940712 139940725 6.0E-06 TGCGCCCCCTCCCC 14 V_HNF3_Q6_M00791 TRANSFAC + 139941071 139941083 4.0E-06 AAAAGCAAATACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 139941071 139941081 1.0E-06 TATTTGCTTTT 11 V_SFPI1_04_M02896 TRANSFAC + 139941076 139941089 1.0E-06 CAAATACAGGAACA 14 V_REST_01_M01256 TRANSFAC + 139941194 139941215 0.0E+00 GCTGGGAGCTGTCCAAGGTGTT 22 V_PEBP_Q6_M00984 TRANSFAC + 139944730 139944744 1.0E-06 ACTCACCACAAAGTT 15 V_CTCF_02_M01259 TRANSFAC + 139941146 139941165 2.0E-06 GTGAGGCCACCAGGGGGCAA 20 V_CTCF_02_M01259 TRANSFAC + 139944435 139944454 4.0E-06 AGAAGGCCTGTAGGGGGCGC 20 V_STAT3_03_M01595 TRANSFAC - 139940812 139940827 7.0E-06 ACTTCTGGGAACCGCA 16 V_CTCF_01_M01200 TRANSFAC + 139941148 139941167 4.0E-06 GAGGCCACCAGGGGGCAAGA 20 V_CTCF_01_M01200 TRANSFAC + 139944437 139944456 3.0E-06 AAGGCCTGTAGGGGGCGCAG 20 V_HNF4A_02_M02868 TRANSFAC + 139944405 139944420 4.0E-06 GCAAAAAGTCCACAGT 16 V_ELK1_01_M00007 TRANSFAC - 139935794 139935809 9.0E-06 CTCACAGGAAGCGCCC 16 V_MTF1_06_M02882 TRANSFAC - 139941263 139941276 3.0E-06 AAAAAAAAAAAAGA 14 V_MTF1_06_M02882 TRANSFAC - 139941264 139941277 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 139941265 139941278 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 139941266 139941279 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 139941268 139941281 3.0E-06 AGAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 139941270 139941283 1.0E-06 AAAGAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 139941265 139941278 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 139941266 139941279 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 139941267 139941280 9.0E-06 GAAAAAAAAAAAAA 14 V_PKNOX2_01_M01411 TRANSFAC - 139941225 139941240 9.0E-06 AAAGGGCTGTCACCTG 16 V_CNOT3_01_M01253 TRANSFAC - 139940117 139940126 4.0E-06 GGCCGCGCCG 10 V_ZFP206_01_M01742 TRANSFAC + 139940666 139940676 8.0E-06 TGCGCCTGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 139940667 139940677 4.0E-06 CGCGCAGGCGC 11 V_FPM315_01_M01587 TRANSFAC + 139940533 139940544 9.0E-06 GGGGGAGGACGC 12 V_FPM315_01_M01587 TRANSFAC + 139940567 139940578 6.0E-06 CAAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 139940570 139940581 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 139940573 139940584 3.0E-06 GGAGGAGGAGGA 12 V_NRSF_01_M00256 TRANSFAC - 139941198 139941218 8.0E-06 CTGAACACCTTGGACAGCTCC 21 V_REST_02_M02256 TRANSFAC - 139941198 139941218 0.0E+00 CTGAACACCTTGGACAGCTCC 21 V_ZFP281_01_M01597 TRANSFAC - 139940717 139940727 3.0E-06 AGGGGGAGGGG 11 V_EGR1_06_M02744 TRANSFAC - 139940683 139940696 7.0E-06 CCCGCCCCCTCAGG 14 V_IRC900814_03_M02766 TRANSFAC + 139944514 139944529 5.0E-06 ACTCACGACAAAGTTC 16 V_IRC900814_03_M02766 TRANSFAC + 139944550 139944565 8.0E-06 ACCCACGACAAAGTTC 16 V_IRC900814_03_M02766 TRANSFAC + 139944694 139944709 8.0E-06 ACCCACGACAAAGTTC 16 V_SRF_06_M02916 TRANSFAC - 139941261 139941277 2.0E-06 AAAAAAAAAAAAAGATG 17 V_SRF_06_M02916 TRANSFAC - 139941262 139941278 0.0E+00 AAAAAAAAAAAAAAGAT 17 V_SRF_06_M02916 TRANSFAC - 139941263 139941279 0.0E+00 AAAAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC - 139941264 139941280 0.0E+00 GAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 139941265 139941281 0.0E+00 AGAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941266 139941282 0.0E+00 AAGAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941267 139941283 0.0E+00 AAAGAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941268 139941284 0.0E+00 CAAAGAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941269 139941285 4.0E-06 TCAAAGAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941270 139941286 6.0E-06 CTCAAAGAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 139941271 139941287 8.0E-06 TCTCAAAGAAAAAAAAA 17 V_UF1H3BETA_Q6_M01068 TRANSFAC - 139940902 139940915 6.0E-06 TGCGGGTGAGGGGC 14 V_TCF3_05_M02920 TRANSFAC - 139941267 139941281 6.0E-06 AGAAAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 139941268 139941282 3.0E-06 AAGAAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 139941269 139941283 2.0E-06 AAAGAAAAAAAAAAA 15 V_PAX4_04_M00380 TRANSFAC - 139941253 139941282 4.0E-06 AAGAAAAAAAAAAAAAAAGATGCCCATTGT 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.