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RELN Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5649 reelin chr7 - 103629463 - 103634963 103629963 Transcription Factor Binding Sites   Download all TFBS in the RELN promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 103634371 103634388 2.0E-06 TAAATTCAAATCAAATTA 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 103630736 103630752 4.0E-06 ATTTTAAAATGAGATTA 17 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 103630741 103630753 8.0E-06 AAAATGAGATTAA 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 103634377 103634389 1.0E-06 CAAATCAAATTAA 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 103634377 103634389 5.0E-06 TTAATTTGATTTG 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 103634382 103634394 3.0E-06 CAAATTAAATTTA 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 103634382 103634394 7.0E-06 TAAATTTAATTTG 13 EWSR1-FLI1_MA0149.1 JASPAR + 103629499 103629516 9.0E-06 GGAAGAAGGAAAGGGATG 18 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 103634377 103634389 1.0E-06 CAAATCAAATTAA 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 103634377 103634389 7.0E-06 TTAATTTGATTTG 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 103634382 103634394 5.0E-06 CAAATTAAATTTA 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 103634391 103634402 1.0E-05 TTTAAAAATAAG 12 Pax4_MA0068.1 JASPAR - 103630916 103630945 8.0E-06 CACTGATTTAAAAAATTACAACACCCATCT 30 PROP1_homeodomain_full_dimeric_11_1 SELEX + 103634378 103634388 2.0E-06 AAATCAAATTA 11 MEF2A_MA0052.1 JASPAR - 103634392 103634401 7.0E-06 TTATTTTTAA 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 103634377 103634389 1.0E-06 CAAATCAAATTAA 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 103634377 103634389 8.0E-06 TTAATTTGATTTG 13 ALX3_homeodomain_full_dimeric_13_1 SELEX + 103634382 103634394 5.0E-06 CAAATTAAATTTA 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 103634382 103634394 9.0E-06 TAAATTTAATTTG 13 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 103630812 103630823 5.0E-06 ATTCCCCACAAC 12 SP1_MA0079.2 JASPAR + 103630190 103630199 7.0E-06 CCCCGCCCCC 10 ONECUT2_CUT_DBD_monomeric_14_1 SELEX + 103631079 103631092 9.0E-06 AAATAATCCATAAG 14 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 103634377 103634389 1.0E-06 CAAATCAAATTAA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 103634382 103634394 7.0E-06 CAAATTAAATTTA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 103634382 103634394 6.0E-06 TAAATTTAATTTG 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 103634378 103634388 4.0E-06 AAATCAAATTA 11 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 103634378 103634388 6.0E-06 TAATTTGATTT 11 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 103634383 103634393 6.0E-06 AAATTTAATTT 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 103630741 103630753 8.0E-06 AAAATGAGATTAA 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 103634377 103634389 1.0E-06 CAAATCAAATTAA 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 103634382 103634394 3.0E-06 CAAATTAAATTTA 13 Lhx3_MA0135.1 JASPAR + 103634383 103634395 6.0E-06 AAATTAAATTTAA 13 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 103630381 103630397 4.0E-06 TTCTGCGAGGGACGTCA 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 103634371 103634388 4.0E-06 TAAATTCAAATCAAATTA 18 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 103634378 103634388 9.0E-06 AAATCAAATTA 11 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 103634383 103634393 7.0E-06 AAATTTAATTT 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 103634377 103634389 6.0E-06 CAAATCAAATTAA 13 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 103634377 103634389 6.0E-06 TTAATTTGATTTG 13 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 103634382 103634394 3.0E-06 TAAATTTAATTTG 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 103634377 103634389 7.0E-06 TTAATTTGATTTG 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 103634382 103634394 2.0E-06 TAAATTTAATTTG 13 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 103630749 103630763 6.0E-06 ATTAAGCGAAAGTGG 15 Pou5f1_MA0142.1 JASPAR + 103634367 103634381 4.0E-06 TATTTAAATTCAAAT 15 LHX6_homeodomain_full_dimeric_12_1 SELEX + 103628116 103628127 5.0E-06 TGGTTGCCATCA 12 LHX6_homeodomain_full_dimeric_12_1 SELEX - 103628116 103628127 6.0E-06 TGATGGCAACCA 12 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 103630813 103630823 8.0E-06 ATTCCCCACAA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 103634378 103634388 6.0E-06 AAATCAAATTA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 103634378 103634388 6.0E-06 TAATTTGATTT 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 103634383 103634393 4.0E-06 AAATTTAATTT 11 MAFK_bZIP_full_monomeric_12_1 SELEX - 103628203 103628214 9.0E-06 AAAAGTGCTTAC 12 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 103634912 103634923 7.0E-06 TTCCCCCACATG 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 103634371 103634388 5.0E-06 TAAATTCAAATCAAATTA 18 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 103631079 103631092 7.0E-06 AAATAATCCATAAG 14 V_ELF5_03_M02057 TRANSFAC - 103630473 103630482 8.0E-06 CCAGGAAAAA 10 V_HOXA9_01_M01351 TRANSFAC + 103634379 103634395 9.0E-06 AATCAAATTAAATTTAA 17 V_FOXP1_01_M00987 TRANSFAC + 103630931 103630950 1.0E-05 TTTTTTAAATCAGTGTTTAT 20 V_FOXP1_01_M00987 TRANSFAC - 103634382 103634401 5.0E-06 TTATTTTTAAATTTAATTTG 20 V_CEBPG_Q6_M00622 TRANSFAC - 103630931 103630943 0.0E+00 CTGATTTAAAAAA 13 V_DBX1_01_M01483 TRANSFAC + 103634384 103634400 1.0E-06 AATTAAATTTAAAAATA 17 V_DBX1_01_M01483 TRANSFAC + 103634385 103634401 5.0E-06 ATTAAATTTAAAAATAA 17 V_MAFK_03_M02776 TRANSFAC - 103628201 103628215 1.0E-06 TAAAAGTGCTTACTA 15 V_NF1A_Q6_M02103 TRANSFAC - 103631192 103631207 4.0E-06 CTGGCTTGGTGGCAAG 16 V_HMGIY_Q3_M01010 TRANSFAC + 103630924 103630938 6.0E-06 GTTGTAATTTTTTAA 15 V_EVI1_04_M00081 TRANSFAC - 103630928 103630942 5.0E-06 TGATTTAAAAAATTA 15 V_BCL6_01_M01183 TRANSFAC - 103634383 103634398 0.0E+00 TTTTTAAATTTAATTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 103630883 103630894 8.0E-06 AATGAATAACAG 12 V_MAFB_05_M02775 TRANSFAC - 103628198 103628214 3.0E-06 AAAAGTGCTTACTACGC 17 V_MMEF2_Q6_M00405 TRANSFAC - 103634384 103634399 4.0E-06 ATTTTTAAATTTAATT 16 V_GATA3_03_M00351 TRANSFAC + 103628039 103628048 8.0E-06 AGAGATCATA 10 V_POU5F1_02_M02245 TRANSFAC + 103634367 103634381 4.0E-06 TATTTAAATTCAAAT 15 V_PROP1_01_M01294 TRANSFAC - 103634378 103634388 1.0E-06 TAATTTGATTT 11 V_MEF2_02_M00231 TRANSFAC + 103634385 103634406 7.0E-06 ATTAAATTTAAAAATAAGTTCT 22 V_IRF_Q6_01_M00972 TRANSFAC + 103631072 103631082 5.0E-06 GGAAGTGAAAT 11 V_NFAT3_Q3_M01734 TRANSFAC - 103629688 103629697 6.0E-06 TCTTTTTCCT 10 V_NFAT3_Q3_M01734 TRANSFAC + 103630471 103630480 6.0E-06 TGTTTTTCCT 10 V_POU2F3_01_M01476 TRANSFAC + 103634370 103634385 4.0E-06 TTAAATTCAAATCAAA 16 V_FOXO3A_Q1_M01137 TRANSFAC + 103634393 103634404 1.0E-06 TAAAAATAAGTT 12 V_HOXC4_01_M01369 TRANSFAC - 103634876 103634892 7.0E-06 CGTATTAATGAAGTGTT 17 V_SP1_03_M02281 TRANSFAC + 103630190 103630199 7.0E-06 CCCCGCCCCC 10 V_PRX2_Q2_M02115 TRANSFAC + 103634381 103634389 2.0E-06 TCAAATTAA 9 V_MEF2A_Q6_M02024 TRANSFAC - 103634391 103634400 1.0E-06 TATTTTTAAA 10 V_TAL1_GATA1_01_M02243 TRANSFAC + 103634936 103634953 2.0E-06 CTGGAGAGATCAGATAAT 18 V_PPARGRXRA_01_M02262 TRANSFAC + 103634915 103634929 9.0E-06 GTGGGGGAAAGAGCA 15 V_HNF6_Q6_M00639 TRANSFAC + 103631080 103631091 6.0E-06 AATAATCCATAA 12 V_ELF4_04_M02850 TRANSFAC - 103630924 103630940 7.0E-06 ATTTAAAAAATTACAAC 17 V_ELF4_04_M02850 TRANSFAC - 103630925 103630941 8.0E-06 GATTTAAAAAATTACAA 17 V_TST1_01_M00133 TRANSFAC - 103634366 103634380 7.0E-06 TTTGAATTTAAATAG 15 V_TCF3_04_M02816 TRANSFAC - 103628205 103628221 8.0E-06 TTTAGATAAAAGTGCTT 17 V_CEBPE_Q6_M01868 TRANSFAC - 103630922 103630935 4.0E-06 AAAAATTACAACAC 14 V_HOXB13_01_M01467 TRANSFAC + 103634379 103634394 5.0E-06 AATCAAATTAAATTTA 16 V_GFI1_01_M00250 TRANSFAC + 103630930 103630953 1.0E-06 ATTTTTTAAATCAGTGTTTATTTC 24 V_GFI1_01_M00250 TRANSFAC + 103634371 103634394 4.0E-06 TAAATTCAAATCAAATTAAATTTA 24 V_NFAT_Q6_M00302 TRANSFAC + 103629685 103629696 5.0E-06 CACAGGAAAAAG 12 V_NKX61_01_M00424 TRANSFAC - 103634380 103634392 1.0E-06 AATTTAATTTGAT 13 V_HIC1_03_M01073 TRANSFAC + 103629608 103629625 4.0E-06 TGGGGTTGCCCGCAATAT 18 V_KROX_Q6_M00982 TRANSFAC + 103630191 103630204 9.0E-06 CCCGCCCCCGCGCG 14 V_RSRFC4_Q2_M00407 TRANSFAC + 103634389 103634405 1.0E-06 AATTTAAAAATAAGTTC 17 V_IRF3_Q3_M01279 TRANSFAC - 103630751 103630763 6.0E-06 CCACTTTCGCTTA 13 V_EVI1_01_M00078 TRANSFAC + 103634942 103634957 2.0E-06 AGATCAGATAATATAA 16 V_MAZ_Q6_01_M02023 TRANSFAC - 103631172 103631185 1.0E-05 GTGGGTGGGGAGAG 14 V_EGR1_Q6_M01873 TRANSFAC - 103630192 103630201 4.0E-06 GCGGGGGCGG 10 V_STAT5A_02_M00460 TRANSFAC + 103634850 103634873 6.0E-06 TTCTCTGAAAGAGTGTAATTGGAG 24 V_HNF1_Q6_01_M01011 TRANSFAC + 103634381 103634401 5.0E-06 TCAAATTAAATTTAAAAATAA 21 V_MEF2_03_M00232 TRANSFAC + 103634385 103634406 1.0E-05 ATTAAATTTAAAAATAAGTTCT 22 V_OCT1_04_M00138 TRANSFAC - 103630926 103630948 5.0E-06 AAACACTGATTTAAAAAATTACA 23 V_OCT1_04_M00138 TRANSFAC + 103634366 103634388 0.0E+00 CTATTTAAATTCAAATCAAATTA 23 Tal1_Gata1_MA0140.1 JASPAR + 103634936 103634953 2.0E-06 CTGGAGAGATCAGATAAT 18 V_SOX12_04_M02900 TRANSFAC - 103630533 103630548 1.0E-06 GCTCAGACAAAGAAAC 16 V_MEF2_04_M00233 TRANSFAC - 103634361 103634382 5.0E-06 GATTTGAATTTAAATAGCTACC 22 V_MEF2_Q6_01_M00941 TRANSFAC - 103634392 103634403 2.0E-06 ACTTATTTTTAA 12 V_CDC5_01_M00478 TRANSFAC - 103630930 103630941 8.0E-06 GATTTAAAAAAT 12 V_PMX2B_01_M01356 TRANSFAC + 103634876 103634892 8.0E-06 AACACTTCATTAATACG 17 V_TBP_06_M02814 TRANSFAC - 103630928 103630943 6.0E-06 CTGATTTAAAAAATTA 16 V_TBP_06_M02814 TRANSFAC + 103634385 103634400 0.0E+00 ATTAAATTTAAAAATA 16 V_TBP_06_M02814 TRANSFAC - 103634387 103634402 1.0E-06 CTTATTTTTAAATTTA 16 V_LHX3b_01_M01971 TRANSFAC - 103634382 103634391 6.0E-06 ATTTAATTTG 10 V_HOXB4_01_M01424 TRANSFAC - 103634876 103634892 9.0E-06 CGTATTAATGAAGTGTT 17 V_NEUROD_02_M01288 TRANSFAC + 103630421 103630432 9.0E-06 GTCCAGCTGTCT 12 V_SP4_Q5_M01273 TRANSFAC + 103630189 103630199 5.0E-06 CCCCCGCCCCC 11 V_PTF1BETA_Q6_M00657 TRANSFAC + 103630998 103631011 3.0E-06 GAAAAACGTTCAGG 14 V_HBP1_04_M02866 TRANSFAC - 103630736 103630752 1.0E-05 TAATCTCATTTTAAAAT 17 V_MYOD_Q6_02_M02100 TRANSFAC + 103630424 103630432 8.0E-06 CAGCTGTCT 9 V_MTF1_06_M02882 TRANSFAC + 103634388 103634401 7.0E-06 AAATTTAAAAATAA 14 V_MTF1_06_M02882 TRANSFAC + 103634389 103634402 5.0E-06 AATTTAAAAATAAG 14 V_BRN4_01_M01473 TRANSFAC + 103630925 103630941 7.0E-06 TTGTAATTTTTTAAATC 17 V_OCT2_01_M01368 TRANSFAC + 103634370 103634385 3.0E-06 TTAAATTCAAATCAAA 16 V_NKX3A_02_M01383 TRANSFAC + 103628201 103628217 5.0E-06 TAGTAAGCACTTTTATC 17 V_PLAG1_01_M01778 TRANSFAC - 103630128 103630143 5.0E-06 GGGGCTTTAAGAAGGT 16 V_TCF7_04_M02921 TRANSFAC - 103628211 103628225 9.0E-06 CCTTTTTAGATAAAA 15 V_LMX1B_01_M01363 TRANSFAC + 103634377 103634393 9.0E-06 CAAATCAAATTAAATTT 17 V_LMX1B_01_M01363 TRANSFAC - 103634378 103634394 9.0E-06 TAAATTTAATTTGATTT 17 V_RSRFC4_01_M00026 TRANSFAC - 103634389 103634404 1.0E-06 AACTTATTTTTAAATT 16 V_PLZF_02_M01075 TRANSFAC + 103630924 103630952 1.0E-06 GTTGTAATTTTTTAAATCAGTGTTTATTT 29 V_PLZF_02_M01075 TRANSFAC - 103634356 103634384 8.0E-06 TTGATTTGAATTTAAATAGCTACCTGGGG 29 V_PLZF_02_M01075 TRANSFAC + 103634375 103634403 3.0E-06 TTCAAATCAAATTAAATTTAAAAATAAGT 29 V_EGR1_06_M02744 TRANSFAC + 103630191 103630204 7.0E-06 CCCGCCCCCGCGCG 14 V_IRF1_Q6_01_M01881 TRANSFAC - 103631071 103631084 8.0E-06 TTATTTCACTTCCC 14 V_GATA2_03_M00349 TRANSFAC + 103634940 103634949 9.0E-06 AGAGATCAGA 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 103629499 103629516 9.0E-06 GGAAGAAGGAAAGGGATG 18 V_SOX18_04_M02905 TRANSFAC - 103634367 103634382 3.0E-06 GATTTGAATTTAAATA 16 V_SOX18_04_M02905 TRANSFAC + 103634383 103634398 1.0E-06 AAATTAAATTTAAAAA 16 V_SOX18_04_M02905 TRANSFAC - 103634383 103634398 8.0E-06 TTTTTAAATTTAATTT 16 V_SOX1_03_M02802 TRANSFAC + 103634369 103634384 9.0E-06 TTTAAATTCAAATCAA 16 V_PAX4_02_M00377 TRANSFAC - 103630926 103630936 3.0E-06 AAAAAATTACA 11 V_SOX15_04_M02903 TRANSFAC + 103634376 103634390 8.0E-06 TCAAATCAAATTAAA 15 V_SOX15_04_M02903 TRANSFAC + 103634381 103634395 1.0E-06 TCAAATTAAATTTAA 15 V_SOX15_04_M02903 TRANSFAC - 103634381 103634395 0.0E+00 TTAAATTTAATTTGA 15 V_MEF2_01_M00006 TRANSFAC + 103634390 103634405 1.0E-06 ATTTAAAAATAAGTTC 16 V_SP1_Q2_01_M00933 TRANSFAC + 103630190 103630199 4.0E-06 CCCCGCCCCC 10 V_MEF2A_05_M01301 TRANSFAC - 103634392 103634403 1.0E-06 ACTTATTTTTAA 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 103630183 103630196 2.0E-06 GGCGGGGGAGCGGC 14 V_HMEF2_Q6_M00406 TRANSFAC + 103634390 103634405 1.0E-06 ATTTAAAAATAAGTTC 16 V_BRN3C_01_M01408 TRANSFAC - 103634878 103634893 2.0E-06 CCGTATTAATGAAGTG 16 V_HOXA10_01_M01464 TRANSFAC + 103634379 103634394 7.0E-06 AATCAAATTAAATTTA 16 V_MAFK_04_M02880 TRANSFAC - 103630923 103630937 1.0E-06 TAAAAAATTACAACA 15 V_HOXD10_01_M01375 TRANSFAC + 103634379 103634395 2.0E-06 AATCAAATTAAATTTAA 17 V_RNF96_01_M01199 TRANSFAC - 103630024 103630033 7.0E-06 GCCCGCAGCC 10 V_PBX1_04_M01357 TRANSFAC + 103634374 103634390 6.0E-06 ATTCAAATCAAATTAAA 17 V_EVI1_03_M00080 TRANSFAC + 103634942 103634952 6.0E-06 AGATCAGATAA 11 V_EVI1_03_M00080 TRANSFAC + 103634947 103634957 4.0E-06 AGATAATATAA 11 PPARG_RXRA_MA0065.2 JASPAR + 103634915 103634929 9.0E-06 GTGGGGGAAAGAGCA 15 V_OCT4_01_M01125 TRANSFAC + 103634367 103634381 1.0E-06 TATTTAAATTCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.