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PCDHA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56145 protocadherin alpha 3 chr5 + 140175782 - 140181282 140180782 Transcription Factor Binding Sites   Download all TFBS in the PCDHA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 140180557 140180572 5.0E-06 TTACATATTTAATACT 16 SOX21_HMG_DBD_dimeric_15_1 SELEX + 140181271 140181285 9.0E-06 AACAAATTCGTTGTT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 140181270 140181285 1.0E-06 GAACAAATTCGTTGTT 16 POU2F1_POU_DBD_dimeric_14_1 SELEX + 140180556 140180569 3.0E-06 TTTACATATTTAAT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 140180556 140180569 2.0E-06 ATTAAATATGTAAA 14 SRY_HMG_DBD_dimeric_15_1 SELEX + 140181271 140181285 9.0E-06 AACAAATTCGTTGTT 15 POU3F3_POU_DBD_monomeric_12_1 SELEX + 140180557 140180568 8.0E-06 TTACATATTTAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 140180556 140180568 5.0E-06 TTTACATATTTAA 13 POU4F3_POU_DBD_monomeric_16_1 SELEX + 140180557 140180572 2.0E-06 TTACATATTTAATACT 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 140181201 140181211 3.0E-06 GGAAATAAACA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 140180556 140180569 5.0E-06 ATTAAATATGTAAA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 140180557 140180568 4.0E-06 TTACATATTTAA 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 140180557 140180568 1.0E-06 TTAAATATGTAA 12 FOXI1_MA0042.1 JASPAR + 140181198 140181209 6.0E-06 ATCTGTTTATTT 12 SOX18_HMG_full_dimeric_15_1 SELEX + 140181271 140181285 6.0E-06 AACAAATTCGTTGTT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 140181201 140181211 9.0E-06 GGAAATAAACA 11 SOX7_HMG_full_dimeric_17_1 SELEX + 140181270 140181286 5.0E-06 GAACAAATTCGTTGTTG 17 POU1F1_POU_DBD_monomeric_17_1 SELEX + 140180554 140180570 5.0E-06 CGTTTACATATTTAATA 17 GMEB2_SAND_DBD_dimer-of-dimers_15_1 SELEX - 140180635 140180649 8.0E-06 TACGTAATGCACGCT 15 POU3F1_POU_DBD_monomeric_12_2 SELEX + 140180557 140180568 7.0E-06 TTACATATTTAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 140180557 140180568 5.0E-06 TTACATATTTAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 140180557 140180568 2.0E-06 TTAAATATGTAA 12 Sox11_HMG_DBD_dimeric_15_1 SELEX + 140181271 140181285 1.0E-06 AACAAATTCGTTGTT 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 140180557 140180568 5.0E-06 TTACATATTTAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 140180557 140180568 2.0E-06 TTAAATATGTAA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX + 140180557 140180570 1.0E-06 TTACATATTTAATA 14 SOX9_HMG_full_dimeric_17_1 SELEX + 140181270 140181286 6.0E-06 GAACAAATTCGTTGTTG 17 V_DBX1_01_M01483 TRANSFAC + 140180558 140180574 3.0E-06 TACATATTTAATACTTA 17 V_FOXO3A_Q1_M01137 TRANSFAC - 140181197 140181208 9.0E-06 AATAAACAGATT 12 V_NKX62_Q2_M00489 TRANSFAC - 140180560 140180571 2.0E-06 GTATTAAATATG 12 V_IRX4_01_M01410 TRANSFAC - 140180553 140180569 9.0E-06 ATTAAATATGTAAACGT 17 V_OCT1_04_M00138 TRANSFAC - 140180548 140180570 7.0E-06 TATTAAATATGTAAACGTATCTT 23 V_HFH1_01_M00129 TRANSFAC + 140181198 140181209 6.0E-06 ATCTGTTTATTT 12 V_NCX_02_M01420 TRANSFAC + 140180558 140180574 2.0E-06 TACATATTTAATACTTA 17 V_MTF1_06_M02882 TRANSFAC + 140180621 140180634 5.0E-06 ACAAAAGAAATAAC 14 V_HOXD8_01_M01432 TRANSFAC + 140180558 140180574 7.0E-06 TACATATTTAATACTTA 17 V_BRN3C_01_M01408 TRANSFAC - 140180558 140180573 9.0E-06 AAGTATTAAATATGTA 16 V_BHLHB2_04_M02845 TRANSFAC - 140180566 140180588 2.0E-06 TGTGGCTAAACGTGTAAGTATTA 23

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