Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PCDHA10


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
56139 protocadherin alpha 10 chr5 +140230633 - 140236133 140235633

Transcription Factor Binding Sites

 
Download all TFBS in the PCDHA10 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
ETV5_ETS_DBD_monomeric_10_1 SELEX + 140235433 140235442 1.0E-05 ACCGGATGTC 10
Sox2_MA0143.1 JASPAR - 140235463 140235477 5.0E-06 CCTTTGTTCTAAAAA 15
TP63_p53l_DBD_dimeric_18_1 SELEX - 140231486 140231503 8.0E-06 AACATGTAGTGACATTAA 18
V_LEF1_04_M02774 TRANSFAC - 140235465 140235481 6.0E-06 GATGCCTTTGTTCTAAA 17
V_TCF3_04_M02816 TRANSFAC + 140235465 140235481 4.0E-06 TTTAGAACAAAGGCATC 17
V_TCF7_03_M02817 TRANSFAC + 140235465 140235481 2.0E-06 TTTAGAACAAAGGCATC 17
V_SOX11_03_M02795 TRANSFAC + 140235465 140235481 1.0E-06 TTTAGAACAAAGGCATC 17
V_SOX2_01_M02246 TRANSFAC - 140235463 140235477 5.0E-06 CCTTTGTTCTAAAAA 15
V_SOX12_03_M02796 TRANSFAC - 140235464 140235477 5.0E-06 CCTTTGTTCTAAAA 14
V_SMAD1_01_M01590 TRANSFAC + 140235467 140235478 7.0E-06 TAGAACAAAGGC 12
V_NANOG_02_M01247 TRANSFAC + 140235463 140235482 1.0E-06 TTTTTAGAACAAAGGCATCA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL