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PCDHA11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56138 chr5 + 140242830 - 140252830 0 Transcription Factor Binding Sites   Download all TFBS in the PCDHA11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 140249142 140249160 1.0E-06 TTTCCACTAGAGGGAGCTT 19 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 140248501 140248519 5.0E-06 AAAGTTCATTTAAAGGTTG 19 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 140248572 140248581 7.0E-06 CTTAAACGGT 10 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 140248502 140248519 4.0E-06 AAGTTCATTTAAAGGTTG 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 140248502 140248519 1.0E-06 AAGTTCATTTAAAGGTTG 18 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 140248503 140248519 7.0E-06 AGTTCATTTAAAGGTTG 17 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 140248572 140248581 9.0E-06 CTTAAACGGT 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 140248503 140248519 9.0E-06 AGTTCATTTAAAGGTTG 17 CTCF_C2H2_full_monomeric_17_1 SELEX - 140249143 140249159 1.0E-06 AGCTCCCTCTAGTGGAA 17 V_FOXP3_Q4_M00992 TRANSFAC + 140249155 140249171 9.0E-06 GAGCTTCTGATGCTGAC 17 V_NFAT_Q6_M00302 TRANSFAC - 140249139 140249150 1.0E-05 TAGTGGAAAACG 12 V_IRF3_Q3_M01279 TRANSFAC - 140249203 140249215 4.0E-06 TCATTTTTACTTA 13 V_CTCF_02_M01259 TRANSFAC + 140249139 140249158 1.0E-06 CGTTTTCCACTAGAGGGAGC 20 V_CTCF_01_M01200 TRANSFAC + 140249141 140249160 3.0E-06 TTTTCCACTAGAGGGAGCTT 20 V_EOMES_04_M02851 TRANSFAC + 140248474 140248489 7.0E-06 CGCAAGGTGTCGCTCT 16 V_ZBTB3_03_M02825 TRANSFAC - 140248441 140248457 8.0E-06 CTGTGCACTGCATTTAC 17 V_TCF4_Q5_M00671 TRANSFAC + 140248585 140248592 1.0E-05 CCTTTGAA 8 V_PLZF_02_M01075 TRANSFAC + 140248499 140248527 1.0E-06 GGAAAGTTCATTTAAAGGTTGGTCTGAAC 29 V_BBX_03_M02739 TRANSFAC - 140248502 140248516 8.0E-06 CCTTTAAATGAACTT 15 V_SMAD1_01_M01590 TRANSFAC + 140249095 140249106 8.0E-06 GAGAACAAAAGC 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.