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PCDHA12 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56137 protocadherin alpha 12 chr5 + 140249930 - 140255430 140254930 Transcription Factor Binding Sites   Download all TFBS in the PCDHA12 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 140254953 140254970 2.0E-06 TTACTAAATATGTACTTA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 140254953 140254970 1.0E-06 TAAGTACATATTTAGTAA 18 CTCF_MA0139.1 JASPAR + 140255511 140255529 2.0E-06 TTTCCTCTAGAGGGCGCTT 19 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 140254949 140254962 3.0E-06 AAATTTACTAAATA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 140254949 140254962 6.0E-06 TATTTAGTAAATTT 14 TEF_bZIP_DBD_dimeric_12_1 SELEX + 140254820 140254831 7.0E-06 ACTTACATAATC 12 HLF_bZIP_full_dimeric_12_1 SELEX + 140254820 140254831 3.0E-06 ACTTACATAATC 12 NFIL3_MA0025.1 JASPAR - 140254819 140254829 5.0E-06 TTATGTAAGTA 11 DBP_bZIP_full_dimeric_12_1 SELEX + 140254820 140254831 9.0E-06 ACTTACATAATC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 140254820 140254831 9.0E-06 GATTATGTAAGT 12 IRF7_IRF_DBD_trimeric_17_1 SELEX + 140254866 140254882 8.0E-06 AACAGGAAAATTTTTTT 17 NFATC1_NFAT_full_dimeric_20_1 SELEX + 140254867 140254886 8.0E-06 ACAGGAAAATTTTTTTCTCC 20 CTCF_C2H2_full_monomeric_17_1 SELEX - 140255512 140255528 1.0E-06 AGCGCCCTCTAGAGGAA 17 Lhx3_MA0135.1 JASPAR + 140254949 140254961 8.0E-06 AAATTTACTAAAT 13 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 140254820 140254831 4.0E-06 ACTTACATAATC 12 EN1_homeodomain_full_dimeric_14_1 SELEX - 140254957 140254970 3.0E-06 TAAGTACATATTTA 14 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 140254833 140254842 8.0E-06 GTCACATGAT 10 NR3C1_MA0113.1 JASPAR - 140254867 140254884 9.0E-06 AGAAAAAAATTTTCCTGT 18 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 140254949 140254962 5.0E-06 AAATTTACTAAATA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 140255597 140255609 4.0E-06 TAAAATAAAAACA 13 SOX9_HMG_full_dimeric_17_1 SELEX - 140254865 140254881 7.0E-06 AAAAAATTTTCCTGTTT 17 V_FOXP1_01_M00987 TRANSFAC - 140255597 140255616 4.0E-06 CTTTTTTTGTTTTTATTTTA 20 V_DBX1_01_M01483 TRANSFAC + 140254946 140254962 3.0E-06 AAAAAATTTACTAAATA 17 V_CEBP_Q3_M00770 TRANSFAC - 140254952 140254963 8.0E-06 ATATTTAGTAAA 12 V_BCL6_01_M01183 TRANSFAC - 140254947 140254962 0.0E+00 TATTTAGTAAATTTTT 16 V_MEF2_02_M00231 TRANSFAC + 140255588 140255609 0.0E+00 TTTTGAGCTTAAAATAAAAACA 22 V_NFAT3_Q3_M01734 TRANSFAC - 140254869 140254878 1.0E-06 AAATTTTCCT 10 V_NFAT3_Q3_M01734 TRANSFAC + 140255507 140255516 3.0E-06 TCATTTTCCT 10 V_HNF3_Q6_01_M01012 TRANSFAC - 140255597 140255614 3.0E-06 TTTTTTGTTTTTATTTTA 18 V_NR3C1_01_M02219 TRANSFAC - 140254867 140254884 9.0E-06 AGAAAAAAATTTTCCTGT 18 V_MEF2A_Q6_M02024 TRANSFAC - 140255594 140255603 2.0E-06 TATTTTAAGC 10 V_STAT4_Q4_M01666 TRANSFAC + 140255596 140255609 2.0E-06 TTAAAATAAAAACA 14 V_CETS1P54_02_M00074 TRANSFAC + 140254865 140254877 2.0E-06 AAACAGGAAAATT 13 V_ELF4_04_M02850 TRANSFAC + 140255594 140255610 1.0E-06 GCTTAAAATAAAAACAA 17 V_ELF4_04_M02850 TRANSFAC + 140255595 140255611 2.0E-06 CTTAAAATAAAAACAAA 17 V_DBP_Q6_01_M01872 TRANSFAC - 140254822 140254829 5.0E-06 TTATGTAA 8 V_ZFP105_03_M02827 TRANSFAC + 140255596 140255610 2.0E-06 TTAAAATAAAAACAA 15 V_SREBP1_01_M00220 TRANSFAC - 140254833 140254843 1.0E-05 CATCATGTGAC 11 V_E4BP4_01_M00045 TRANSFAC - 140254820 140254831 5.0E-06 GATTATGTAAGT 12 V_NFAT_Q6_M00302 TRANSFAC + 140254866 140254877 2.0E-06 AACAGGAAAATT 12 V_NFAT_Q6_M00302 TRANSFAC - 140255508 140255519 3.0E-06 TAGAGGAAAATG 12 V_HNF1_Q6_01_M01011 TRANSFAC + 140254940 140254960 3.0E-06 TGCTGGAAAAAATTTACTAAA 21 V_MEF2_03_M00232 TRANSFAC + 140255588 140255609 0.0E+00 TTTTGAGCTTAAAATAAAAACA 22 V_MEF2_04_M00233 TRANSFAC + 140255588 140255609 5.0E-06 TTTTGAGCTTAAAATAAAAACA 22 V_MEF2_Q6_01_M00941 TRANSFAC - 140255595 140255606 1.0E-05 TTTTATTTTAAG 12 V_CTCF_02_M01259 TRANSFAC + 140255508 140255527 1.0E-06 CATTTTCCTCTAGAGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 140255510 140255529 5.0E-06 TTTTCCTCTAGAGGGCGCTT 20 V_VBP_01_M00228 TRANSFAC + 140254821 140254830 5.0E-06 CTTACATAAT 10 V_ELF1_Q6_M00746 TRANSFAC + 140254864 140254875 4.0E-06 GAAACAGGAAAA 12 V_TFEB_01_M01768 TRANSFAC + 140254833 140254842 7.0E-06 GTCACATGAT 10 V_TFEB_01_M01768 TRANSFAC - 140254833 140254842 7.0E-06 ATCATGTGAC 10 V_FOXL1_02_M02857 TRANSFAC + 140255593 140255608 1.0E-06 AGCTTAAAATAAAAAC 16 V_PLZF_02_M01075 TRANSFAC - 140254939 140254967 2.0E-06 GTACATATTTAGTAAATTTTTTCCAGCAT 29 V_SRF_06_M02916 TRANSFAC + 140255594 140255610 1.0E-06 GCTTAAAATAAAAACAA 17 V_SRF_06_M02916 TRANSFAC + 140255595 140255611 0.0E+00 CTTAAAATAAAAACAAA 17 V_ARP1_01_M00155 TRANSFAC + 140255492 140255507 4.0E-06 TGCGCCTCTGGACTCT 16 V_TFE_Q6_M01029 TRANSFAC - 140254834 140254841 1.0E-05 TCATGTGA 8 V_CEBP_Q2_01_M00912 TRANSFAC + 140254821 140254832 9.0E-06 CTTACATAATCA 12 V_TCF3_05_M02920 TRANSFAC - 140254875 140254889 2.0E-06 TGCGGAGAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC + 140255593 140255607 7.0E-06 AGCTTAAAATAAAAA 15

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