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PCDHAC1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56135 protocadherin alpha subfamily C, 1 chr5 + 140301301 - 140306801 140306301 Transcription Factor Binding Sites   Download all TFBS in the PCDHAC1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox1_HMG_DBD_dimeric_14_1 SELEX + 140303293 140303306 1.0E-06 TGAATAAGAATGCA 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 140303393 140303404 7.0E-06 TCTGAAAATAGA 12 Mafb_bZIP_DBD_monomeric_12_1 SELEX - 140306973 140306984 0.0E+00 AAAGTGCTGACT 12 EWSR1-FLI1_MA0149.1 JASPAR + 140303433 140303450 6.0E-06 GGAAAAAGGGAAGCCAAA 18 GLIS1_C2H2_DBD_monomeric_16_1 SELEX - 140306323 140306338 7.0E-06 CGACCGCCGACGTTGC 16 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 140306052 140306061 7.0E-06 CTTAAACGGT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 140303329 140303338 7.0E-06 ACCATATGCC 10 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 140306052 140306061 9.0E-06 CTTAAACGGT 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 140306398 140306414 8.0E-06 TGCTCTCCAGGAGTCCG 17 NRL_bZIP_DBD_monomeric_11_1 SELEX - 140306974 140306984 3.0E-06 AAAGTGCTGAC 11 TBX20_TBX_full_dimeric_16_1 SELEX + 140306067 140306082 6.0E-06 AAGTGTTAGTGTCTCG 16 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 140306636 140306650 2.0E-06 AGGAAGCGAAAGTTC 15 Pou5f1_MA0142.1 JASPAR - 140303290 140303304 2.0E-06 CATTCTTATTCAAGT 15 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 140303518 140303533 6.0E-06 GAGGAAAAAAGGAAAA 16 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 140303329 140303338 1.0E-05 ACCATATGCC 10 MAFK_bZIP_full_monomeric_12_1 SELEX - 140306974 140306985 7.0E-06 GAAAGTGCTGAC 12 Sox2_MA0143.1 JASPAR - 140303291 140303305 1.0E-05 GCATTCTTATTCAAG 15 OLIG2_bHLH_full_dimeric_10_1 SELEX - 140303329 140303338 9.0E-06 ACCATATGCC 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 140303329 140303338 8.0E-06 ACCATATGCC 10 V_FOXP1_01_M00987 TRANSFAC + 140306498 140306517 5.0E-06 AGTTTTATGTTTGTGGGTTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC + 140306258 140306268 9.0E-06 AGCCTCCAGCC 11 V_BCL6_Q3_01_M02085 TRANSFAC - 140306041 140306050 5.0E-06 TTTTCTAGGA 10 V_MAFK_03_M02776 TRANSFAC - 140306972 140306986 3.0E-06 CGAAAGTGCTGACTG 15 V_AHRARNT_01_M00235 TRANSFAC - 140305542 140305557 5.0E-06 TTTTTTTTGCGTGATA 16 V_HMGIY_Q3_M01010 TRANSFAC + 140303511 140303525 5.0E-06 TATGCATTTTTCCTT 15 V_MAFB_05_M02775 TRANSFAC - 140306969 140306985 4.0E-06 GAAAGTGCTGACTGGGG 17 V_POU5F1_02_M02245 TRANSFAC - 140303290 140303304 2.0E-06 CATTCTTATTCAAGT 15 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 140303411 140303424 3.0E-06 TGGCAGTTTAAATA 14 V_IRF2_Q6_M01882 TRANSFAC - 140306636 140306651 8.0E-06 AAGGAAGCGAAAGTTC 16 V_GABPA_04_M02858 TRANSFAC - 140303426 140303441 1.0E-06 CCTTTTTCCCATTTCT 16 V_PU1_Q4_M01172 TRANSFAC - 140303435 140303453 2.0E-06 ATTTTTGGCTTCCCTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 140305545 140305558 1.0E-06 CACGCAAAAAAAAA 14 V_HELIOSA_02_M01004 TRANSFAC - 140303517 140303527 0.0E+00 AAAAGGAAAAA 11 V_NFAT_Q6_M00302 TRANSFAC - 140303516 140303527 1.0E-06 AAAAGGAAAAAT 12 V_IRF3_Q3_M01279 TRANSFAC + 140303514 140303526 3.0E-06 GCATTTTTCCTTT 13 V_BCL6_Q3_M01171 TRANSFAC - 140306041 140306050 5.0E-06 TTTTCTAGGA 10 V_MEF2_03_M00232 TRANSFAC + 140303387 140303408 6.0E-06 AAATCTTCTGAAAATAGACGTC 22 V_ISRE_01_M00258 TRANSFAC - 140305526 140305540 6.0E-06 CAGTTTCTCCTTCTC 15 V_MEF2_04_M00233 TRANSFAC + 140303409 140303430 7.0E-06 AGTGGCAGTTTAAATAGAGAAA 22 V_PAX8_01_M00717 TRANSFAC - 140305542 140305556 4.0E-06 TTTTTTTGCGTGATA 15 V_SOX17_04_M02904 TRANSFAC - 140303287 140303303 4.0E-06 ATTCTTATTCAAGTAAA 17 V_GR_Q6_02_M01836 TRANSFAC + 140303497 140303509 2.0E-06 CATACTGTTCTCT 13 V_FOXJ3_06_M02855 TRANSFAC - 140303303 140303319 9.0E-06 TTTGGCATAACATTGCA 17 V_TCFAP2B_04_M02924 TRANSFAC + 140306577 140306591 1.0E-06 GTAGCCGTAGGCAAT 15 V_DMRT2_01_M01147 TRANSFAC - 140303260 140303275 6.0E-06 GAGAAAGCAACATTTA 16 V_SOX2_01_M02246 TRANSFAC - 140303291 140303305 1.0E-05 GCATTCTTATTCAAG 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 140303433 140303450 6.0E-06 GGAAAAAGGGAAGCCAAA 18 V_FOXJ2_01_M00422 TRANSFAC - 140306500 140306517 7.0E-06 AAACCCACAAACATAAAA 18 V_TAACC_B_M00331 TRANSFAC + 140303431 140303453 9.0E-06 TGGGAAAAAGGGAAGCCAAAAAT 23 V_RNF96_01_M01199 TRANSFAC + 140306108 140306117 7.0E-06 GCCCGCAGCC 10 V_NANOG_02_M01247 TRANSFAC + 140303291 140303310 8.0E-06 CTTGAATAAGAATGCAATGT 20 V_NANOG_02_M01247 TRANSFAC - 140303364 140303383 7.0E-06 TTGTGAAAAGAATGAAGAAA 20 V_OCT4_01_M01125 TRANSFAC - 140303290 140303304 3.0E-06 CATTCTTATTCAAGT 15

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