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PCDHGA4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56111 protocadherin gamma subfamily A, 4 chr5 + 140729767 - 140735267 140734767 Transcription Factor Binding Sites   Download all TFBS in the PCDHGA4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 140739450 140739467 0.0E+00 TTAGCAAATATTGACAAG 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 140739450 140739467 1.0E-06 CTTGTCAATATTTGCTAA 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 140739608 140739620 5.0E-06 GAAAACAAAAGCA 13 SOX10_HMG_full_dimeric_15_3 SELEX + 140734509 140734523 7.0E-06 ATAAATTGCAGTAAC 15 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 140734489 140734505 2.0E-06 TGGTTAAAAAAAGTTTA 17 POU3F3_POU_DBD_monomeric_12_1 SELEX + 140734505 140734516 6.0E-06 AAGAATAAATTG 12 SOX9_HMG_full_dimeric_17_3 SELEX + 140734508 140734524 4.0E-06 AATAAATTGCAGTAACA 17 SOX8_HMG_full_dimeric_17_1 SELEX + 140734508 140734524 8.0E-06 AATAAATTGCAGTAACA 17 SOX7_HMG_full_dimeric_17_2 SELEX + 140734508 140734524 4.0E-06 AATAAATTGCAGTAACA 17 SOX7_HMG_full_dimeric_17_2 SELEX - 140734670 140734686 4.0E-06 AATAAAGTGCATTCACA 17 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 140739452 140739465 1.0E-06 AGCAAATATTGACA 14 IRF1_MA0050.1 JASPAR + 140739608 140739619 7.0E-06 GAAAACAAAAGC 12 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 140739452 140739465 0.0E+00 AGCAAATATTGACA 14 Foxq1_MA0040.1 JASPAR - 140734487 140734497 4.0E-06 AAAAGTTTATT 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 140734481 140734494 1.0E-06 ATAAAAAATAAACT 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 140739601 140739614 4.0E-06 GGAAACAGAAAACA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 140739452 140739465 0.0E+00 AGCAAATATTGACA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 140739452 140739465 1.0E-06 TGTCAATATTTGCT 14 Lhx3_MA0135.1 JASPAR - 140734576 140734588 8.0E-06 TGATTAAATTTCT 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 140734484 140734494 8.0E-06 AAAAATAAACT 11 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 140734577 140734589 8.0E-06 GAAATTTAATCAG 13 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 140739452 140739465 0.0E+00 AGCAAATATTGACA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 140739452 140739465 1.0E-06 TGTCAATATTTGCT 14 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 140734577 140734589 1.0E-06 GAAATTTAATCAG 13 IRF3_IRF_full_trimeric_21_1 SELEX + 140739594 140739614 2.0E-06 TAGATTCGGAAACAGAAAACA 21 IRF3_IRF_full_trimeric_21_1 SELEX + 140739600 140739620 3.0E-06 CGGAAACAGAAAACAAAAGCA 21 POU3F3_POU_DBD_dimeric_12_1 SELEX + 140734481 140734492 9.0E-06 ATAAAAAATAAA 12 Sox2_MA0143.1 JASPAR - 140734602 140734616 4.0E-06 GCTTTGTGCTGCAGA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 140734482 140734494 7.0E-06 TAAAAAATAAACT 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 140739608 140739620 2.0E-06 GAAAACAAAAGCA 13 RREB1_MA0073.1 JASPAR + 140739563 140739582 2.0E-06 GCACAAACCAACCACACAGA 20 HNF1A_MA0046.1 JASPAR - 140734481 140734494 1.0E-05 AGTTTATTTTTTAT 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 140734481 140734494 6.0E-06 ATAAAAAATAAACT 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 140739601 140739614 1.0E-06 GGAAACAGAAAACA 14 V_HNF3B_01_M00131 TRANSFAC - 140739450 140739464 7.0E-06 GTCAATATTTGCTAA 15 V_NFY_Q6_M00185 TRANSFAC + 140734549 140734559 6.0E-06 TCACCAATCAG 11 V_HMGIY_Q3_M01010 TRANSFAC - 140734480 140734494 1.0E-05 AGTTTATTTTTTATA 15 V_HMGIY_Q3_M01010 TRANSFAC - 140734506 140734520 2.0E-06 ACTGCAATTTATTCT 15 V_HMGIY_Q3_M01010 TRANSFAC + 140739473 140739487 1.0E-05 AGTGCAGTTTCCTGA 15 V_EVI1_04_M00081 TRANSFAC - 140734490 140734504 1.0E-05 GGTTAAAAAAAGTTT 15 V_BCL6_01_M01183 TRANSFAC - 140734565 140734580 9.0E-06 TTTCTGGTTTGTCTTT 16 V_IRF_Q6_01_M00972 TRANSFAC + 140739602 140739612 6.0E-06 GAAACAGAAAA 11 V_HFH4_01_M00742 TRANSFAC - 140734485 140734497 4.0E-06 AAAAGTTTATTTT 13 V_TCFAP2E_04_M02926 TRANSFAC + 140739604 140739617 1.0E-05 AACAGAAAACAAAA 14 V_NFY_C_M00209 TRANSFAC - 140734547 140734560 8.0E-06 CCTGATTGGTGAAC 14 V_ELF4_04_M02850 TRANSFAC + 140734477 140734493 3.0E-06 GTGTATAAAAAATAAAC 17 V_ELF4_04_M02850 TRANSFAC + 140734479 140734495 2.0E-06 GTATAAAAAATAAACTT 17 V_ELF4_04_M02850 TRANSFAC + 140734480 140734496 1.0E-06 TATAAAAAATAAACTTT 17 V_ZFP105_03_M02827 TRANSFAC + 140734480 140734494 3.0E-06 TATAAAAAATAAACT 15 V_ARID5A_03_M02736 TRANSFAC + 140739454 140739467 8.0E-06 CAAATATTGACAAG 14 V_HNF1_Q6_M00790 TRANSFAC - 140734478 140734495 3.0E-06 AAGTTTATTTTTTATACA 18 V_HOXA3_07_M02869 TRANSFAC + 140739463 140739476 8.0E-06 ACAAGCCATTAGTG 14 V_NFKB_Q6_M00194 TRANSFAC + 140739550 140739563 5.0E-06 AGGGGAACTTCCTG 14 V_AP2BETA_Q3_M01858 TRANSFAC - 140734709 140734724 3.0E-06 GTCGAGGCCTGAGGAG 16 V_IRF_Q6_M00772 TRANSFAC - 140739602 140739616 3.0E-06 TTTGTTTTCTGTTTC 15 V_HNF1_Q6_01_M01011 TRANSFAC + 140734477 140734497 2.0E-06 GTGTATAAAAAATAAACTTTT 21 V_TATA_C_M00216 TRANSFAC + 140734478 140734487 7.0E-06 TGTATAAAAA 10 V_OCT1_04_M00138 TRANSFAC + 140734473 140734495 5.0E-06 AAAAGTGTATAAAAAATAAACTT 23 V_HFH1_01_M00129 TRANSFAC - 140734486 140734497 2.0E-06 AAAAGTTTATTT 12 V_HNF4A_Q6_01_M02016 TRANSFAC - 140739625 140739639 8.0E-06 GGGCTAAGGTCACTT 15 V_ARID3A_04_M02735 TRANSFAC - 140734577 140734593 6.0E-06 GATTCTGATTAAATTTC 17 V_FOXO1_Q5_M01216 TRANSFAC + 140739608 140739616 5.0E-06 GAAAACAAA 9 V_ALPHACP1_01_M00687 TRANSFAC + 140734549 140734559 7.0E-06 TCACCAATCAG 11 V_MTF1_06_M02882 TRANSFAC + 140734479 140734492 3.0E-06 GTATAAAAAATAAA 14 V_GABPBETA_Q3_M01876 TRANSFAC - 140739756 140739766 7.0E-06 ACAGGAAGGGC 11 V_MRG2_01_M01395 TRANSFAC - 140739457 140739472 6.0E-06 AATGGCTTGTCAATAT 16 V_HNF1_01_M00132 TRANSFAC - 140734480 140734494 9.0E-06 AGTTTATTTTTTATA 15 V_TCF1_06_M02815 TRANSFAC + 140734493 140734509 8.0E-06 CTTTTTTTAACCAAGAA 17 V_FOX_Q2_M00809 TRANSFAC - 140739450 140739462 9.0E-06 CAATATTTGCTAA 13 V_PLZF_02_M01075 TRANSFAC - 140734485 140734513 4.0E-06 TTTATTCTTGGTTAAAAAAAGTTTATTTT 29 V_IRF1_Q6_01_M01881 TRANSFAC - 140739601 140739614 4.0E-06 TGTTTTCTGTTTCC 14 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 140739623 140739637 3.0E-06 GCTAAGGTCACTTTT 15 V_SOX2_01_M02246 TRANSFAC - 140734602 140734616 4.0E-06 GCTTTGTGCTGCAGA 15 V_SRF_06_M02916 TRANSFAC + 140734477 140734493 8.0E-06 GTGTATAAAAAATAAAC 17 V_SRF_06_M02916 TRANSFAC + 140734479 140734495 0.0E+00 GTATAAAAAATAAACTT 17 V_SRF_06_M02916 TRANSFAC + 140734480 140734496 2.0E-06 TATAAAAAATAAACTTT 17 V_RFX3_05_M02892 TRANSFAC - 140734492 140734514 8.0E-06 ATTTATTCTTGGTTAAAAAAAGT 23 V_HNF1A_01_M02162 TRANSFAC - 140734481 140734494 1.0E-05 AGTTTATTTTTTAT 14 V_TCF3_05_M02920 TRANSFAC + 140734501 140734515 4.0E-06 AACCAAGAATAAATT 15 V_SMAD1_01_M01590 TRANSFAC + 140739608 140739619 4.0E-06 GAAAACAAAAGC 12 V_NANOG_02_M01247 TRANSFAC + 140739604 140739623 7.0E-06 AACAGAAAACAAAAGCAGGA 20

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