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PCDHGA6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56109 protocadherin gamma subfamily A, 6 chr5 + 140748650 - 140754150 140753650 Transcription Factor Binding Sites   Download all TFBS in the PCDHGA6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 140755132 140755150 9.0E-06 CACCCTCCAGGGGGCGCCC 19 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 140753618 140753626 5.0E-06 CTTAATCCC 9 SPIC_ETS_full_monomeric_14_1 SELEX - 140753607 140753620 2.0E-06 AAGAAGAGGAAGAA 14 FOXA1_MA0148.1 JASPAR - 140749868 140749878 6.0E-06 TATTTGCTTTG 11 SOX9_HMG_full_dimeric_16_1 SELEX - 140749656 140749671 4.0E-06 AAAAATCGGCAGTGTA 16 SRF_MADS_DBD_dimeric_12_1 SELEX + 140749684 140749695 8.0E-06 TCCTTATTTGGA 12 SRF_MADS_DBD_dimeric_12_1 SELEX - 140749684 140749695 5.0E-06 TCCAAATAAGGA 12 Pax4_MA0068.1 JASPAR + 140753440 140753469 4.0E-06 GAAAATCAACGGAAACTCAAGTTACATCCT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 140753607 140753620 1.0E-05 AAGAAGAGGAAGAA 14 PITX1_homeodomain_full_monomeric_8_1 SELEX + 140753619 140753626 1.0E-05 TTAATCCC 8 POU6F2_POU_DBD_dimeric_16_1 SELEX + 140749675 140749690 1.0E-06 CTAACTAGCTCCTTAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 140749675 140749690 1.0E-06 ATAAGGAGCTAGTTAG 16 E2F8_E2F_DBD_dimeric_12_1 SELEX - 140753486 140753497 1.0E-05 TTTCCCGTCTAA 12 NFATC1_NFAT_full_dimeric_20_1 SELEX + 140753447 140753466 5.0E-06 AACGGAAACTCAAGTTACAT 20 Lhx3_MA0135.1 JASPAR - 140749905 140749917 1.0E-05 TCTTTAAATAATC 13 SOX7_HMG_full_dimeric_16_1 SELEX - 140749656 140749671 7.0E-06 AAAAATCGGCAGTGTA 16 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 140753619 140753626 1.0E-05 TTAATCCC 8 SOX21_HMG_DBD_dimeric_16_1 SELEX - 140749656 140749671 3.0E-06 AAAAATCGGCAGTGTA 16 Sox2_MA0143.1 JASPAR + 140749521 140749535 9.0E-06 CCTTTGACAAGTAAA 15 V_SRF_Q6_M00186 TRANSFAC - 140749683 140749696 0.0E+00 CTCCAAATAAGGAG 14 V_STAT5A_Q6_M01890 TRANSFAC + 140753572 140753584 1.0E-06 CTATTTCTGAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 140753576 140753588 9.0E-06 GCTCTTCTCAGAA 13 V_NKX29_01_M01352 TRANSFAC + 140749532 140749548 2.0E-06 TAAAAGGTACTTGATTT 17 V_STAT_Q6_M00777 TRANSFAC + 140753571 140753583 7.0E-06 GCTATTTCTGAGA 13 V_MEF2_02_M00231 TRANSFAC - 140749902 140749923 8.0E-06 AGGAGATCTTTAAATAATCCCA 22 V_HNF3_Q6_01_M01012 TRANSFAC - 140749866 140749883 1.0E-06 CCAACTATTTGCTTTGTC 18 V_PU1_Q4_M01172 TRANSFAC + 140753601 140753619 3.0E-06 GATCTGTTCTTCCTCTTCT 19 V_MEF2A_Q6_M02024 TRANSFAC + 140749908 140749917 4.0E-06 TATTTAAAGA 10 V_STAT4_Q4_M01666 TRANSFAC + 140753576 140753589 4.0E-06 TTCTGAGAAGAGCA 14 V_SRF_C_M00215 TRANSFAC - 140749681 140749695 6.0E-06 TCCAAATAAGGAGCT 15 V_SRF_C_M00215 TRANSFAC + 140749684 140749698 5.0E-06 TCCTTATTTGGAGCT 15 V_CRX_Q4_M00623 TRANSFAC + 140753616 140753628 3.0E-06 TTCTTAATCCCAG 13 V_AP1_Q4_M00188 TRANSFAC - 140749700 140749710 4.0E-06 GGTGACTAAAT 11 V_HNF3_Q6_M00791 TRANSFAC + 140749868 140749880 3.0E-06 CAAAGCAAATAGT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 140749868 140749878 3.0E-06 TATTTGCTTTG 11 V_SOX_Q6_M01014 TRANSFAC + 140750027 140750039 2.0E-06 CTCTTTGTTAGAC 13 V_MEF2_03_M00232 TRANSFAC - 140749902 140749923 1.0E-06 AGGAGATCTTTAAATAATCCCA 22 V_SPIB_01_M01204 TRANSFAC + 140750199 140750215 3.0E-06 GAAAATGGGAACTTACT 17 V_TCF7_03_M02817 TRANSFAC + 140753470 140753486 8.0E-06 CCAACAACAAAGCAAAT 17 V_SRF_Q5_02_M01007 TRANSFAC + 140749680 140749698 0.0E+00 TAGCTCCTTATTTGGAGCT 19 V_STAT4_Q5_M02117 TRANSFAC - 140753575 140753584 9.0E-06 TTCTCAGAAA 10 V_CTCF_02_M01259 TRANSFAC + 140755129 140755148 5.0E-06 AGACACCCTCCAGGGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 140755131 140755150 3.0E-06 ACACCCTCCAGGGGGCGCCC 20 V_SRF_03_M01304 TRANSFAC - 140749684 140749696 1.0E-06 CTCCAAATAAGGA 13 V_ELF1_Q6_M00746 TRANSFAC - 140753608 140753619 2.0E-06 AGAAGAGGAAGA 12 V_TAL1_01_M01591 TRANSFAC + 140750018 140750030 9.0E-06 CTTCCTGCTCTCT 13 V_AP1FJ_Q2_M00172 TRANSFAC - 140749700 140749710 4.0E-06 GGTGACTAAAT 11 V_OCT1_Q6_M00195 TRANSFAC + 140753475 140753489 8.0E-06 AACAAAGCAAATTAG 15 V_NKX3A_02_M01383 TRANSFAC + 140749532 140749548 7.0E-06 TAAAAGGTACTTGATTT 17 V_PITX2_Q2_M00482 TRANSFAC + 140753618 140753628 8.0E-06 CTTAATCCCAG 11 V_SRF_Q5_01_M00922 TRANSFAC - 140749680 140749694 0.0E+00 CCAAATAAGGAGCTA 15 V_SRF_Q5_01_M00922 TRANSFAC + 140749685 140749699 7.0E-06 CCTTATTTGGAGCTG 15 V_SRF_Q4_M00810 TRANSFAC - 140749678 140749695 0.0E+00 TCCAAATAAGGAGCTAGT 18 V_LEF1TCF1_Q4_M00978 TRANSFAC - 140753472 140753482 6.0E-06 GCTTTGTTGTT 11 V_SRF_02_M01257 TRANSFAC - 140749679 140749696 4.0E-06 CTCCAAATAAGGAGCTAG 18 V_SOX2_01_M02246 TRANSFAC + 140749521 140749535 9.0E-06 CCTTTGACAAGTAAA 15 V_PLAGL1_03_M02786 TRANSFAC + 140755139 140755154 1.0E-06 CAGGGGGCGCCCCTGT 16 V_MAFK_04_M02880 TRANSFAC + 140749800 140749814 6.0E-06 AAGAAAAGTGCACTC 15 V_STAT1_05_M01260 TRANSFAC + 140753573 140753594 8.0E-06 TATTTCTGAGAAGAGCAAAAGT 22 V_PAX4_04_M00380 TRANSFAC + 140753440 140753469 4.0E-06 GAAAATCAACGGAAACTCAAGTTACATCCT 30 V_NANOG_02_M01247 TRANSFAC + 140749859 140749878 5.0E-06 GCACAAAGACAAAGCAAATA 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 140753520 140753530 3.0E-06 TTTCAGGTCAG 11 V_OCT4_01_M01125 TRANSFAC + 140749522 140749536 9.0E-06 CTTTGACAAGTAAAA 15

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