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PCDHGB6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56100 protocadherin gamma subfamily B, 6 chr5 + 140782769 - 140788269 140787769 Transcription Factor Binding Sites   Download all TFBS in the PCDHGB6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU3F3_POU_DBD_monomeric_12_1 SELEX - 140792388 140792399 1.0E-06 TTAAATAATTTA 12 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 140792389 140792402 6.0E-06 AAATTATTTAAAGA 14 POU3F2_POU_DBD_monomeric_13_1 SELEX - 140792388 140792400 1.0E-06 TTTAAATAATTTA 13 POU4F3_POU_DBD_monomeric_16_1 SELEX - 140792384 140792399 3.0E-06 TTAAATAATTTACTAT 16 TCF4_bHLH_full_dimeric_10_1 SELEX + 140787416 140787425 7.0E-06 TACACCTGCA 10 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 140791291 140791305 7.0E-06 ATTTAAAAATTAGCA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 140792386 140792400 2.0E-06 AGTAAATTATTTAAA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 140792386 140792400 3.0E-06 TTTAAATAATTTACT 15 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 140792387 140792399 4.0E-06 GTAAATTATTTAA 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 140792387 140792399 6.0E-06 TTAAATAATTTAC 13 POU3F1_POU_DBD_monomeric_12_2 SELEX - 140792388 140792399 0.0E+00 TTAAATAATTTA 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 140787586 140787601 2.0E-06 ACAGAAAGAAGAAAAC 16 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 140792389 140792402 9.0E-06 AAATTATTTAAAGA 14 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 140791291 140791305 1.0E-05 ATTTAAAAATTAGCA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 140792386 140792400 3.0E-06 AGTAAATTATTTAAA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 140792386 140792400 3.0E-06 TTTAAATAATTTACT 15 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 140787436 140787446 5.0E-06 AATGTATATAT 11 POU4F1_POU_DBD_monomeric_14_1 SELEX - 140792386 140792399 3.0E-06 TTAAATAATTTACT 14 HNF1A_MA0046.1 JASPAR + 140792386 140792399 3.0E-06 AGTAAATTATTTAA 14 V_TST1_02_M01316 TRANSFAC - 140792385 140792401 4.0E-06 CTTTAAATAATTTACTA 17 V_TST1_02_M01316 TRANSFAC + 140792386 140792402 4.0E-06 AGTAAATTATTTAAAGA 17 V_DBX1_01_M01483 TRANSFAC + 140792385 140792401 0.0E+00 TAGTAAATTATTTAAAG 17 V_DBX1_01_M01483 TRANSFAC + 140792388 140792404 4.0E-06 TAAATTATTTAAAGATA 17 V_DBX1_01_M01483 TRANSFAC + 140792389 140792405 1.0E-06 AAATTATTTAAAGATAG 17 V_SRY_07_M02813 TRANSFAC + 140792430 140792445 1.0E-06 GTAAAATATAATAATC 16 V_SRY_07_M02813 TRANSFAC - 140792430 140792445 4.0E-06 GATTATTATATTTTAC 16 V_SRY_07_M02813 TRANSFAC - 140792433 140792448 2.0E-06 TTGGATTATTATATTT 16 V_BCL6B_03_M02740 TRANSFAC + 140787425 140787440 0.0E+00 ATTTTCGAAGAATATA 16 V_BCL6_01_M01183 TRANSFAC - 140792389 140792404 1.0E-06 TATCTTTAAATAATTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 140792390 140792401 8.0E-06 AATTATTTAAAG 12 V_OCT1_Q5_01_M00930 TRANSFAC - 140792427 140792437 6.0E-06 TATTTTACATA 11 V_MEF2_02_M00231 TRANSFAC - 140792387 140792408 3.0E-06 CTCCTATCTTTAAATAATTTAC 22 V_POU1F1_Q6_M00744 TRANSFAC - 140787436 140787445 5.0E-06 ATGTATATAT 10 V_STAT5B_01_M00459 TRANSFAC - 140787425 140787439 1.0E-05 ATATTCTTCGAAAAT 15 V_SOX21_03_M02803 TRANSFAC + 140792430 140792445 5.0E-06 GTAAAATATAATAATC 16 V_SOX21_03_M02803 TRANSFAC - 140792430 140792445 3.0E-06 GATTATTATATTTTAC 16 V_SOX21_03_M02803 TRANSFAC - 140792433 140792448 1.0E-06 TTGGATTATTATATTT 16 V_BRN2_01_M00145 TRANSFAC + 140787455 140787470 8.0E-06 CGAATTCAAAATGAAA 16 V_PAX6_02_M01391 TRANSFAC + 140792385 140792400 3.0E-06 TAGTAAATTATTTAAA 16 V_CDX_Q5_M00991 TRANSFAC + 140792383 140792400 3.0E-06 TATAGTAAATTATTTAAA 18 V_MEF2A_Q6_M02024 TRANSFAC + 140792393 140792402 4.0E-06 TATTTAAAGA 10 V_ELF4_04_M02850 TRANSFAC + 140792429 140792445 1.0E-05 TGTAAAATATAATAATC 17 V_DBX2_01_M01360 TRANSFAC - 140792385 140792400 5.0E-06 TTTAAATAATTTACTA 16 V_HNF1_Q6_M00790 TRANSFAC + 140792385 140792402 0.0E+00 TAGTAAATTATTTAAAGA 18 V_E47_02_M00071 TRANSFAC - 140787413 140787428 6.0E-06 AAATGCAGGTGTACAT 16 V_HNF1_Q6_01_M01011 TRANSFAC - 140792383 140792403 1.0E-06 ATCTTTAAATAATTTACTATA 21 V_MEF2_03_M00232 TRANSFAC - 140792387 140792408 3.0E-06 CTCCTATCTTTAAATAATTTAC 22 V_OCT1_04_M00138 TRANSFAC + 140792420 140792442 0.0E+00 AAGAATCTATGTAAAATATAATA 23 V_OCT1_08_M01354 TRANSFAC - 140792385 140792400 2.0E-06 TTTAAATAATTTACTA 16 V_PIT1_01_M01465 TRANSFAC + 140792386 140792402 5.0E-06 AGTAAATTATTTAAAGA 17 V_HFH1_01_M00129 TRANSFAC + 140792452 140792463 9.0E-06 AATAGTTTACTT 12 V_NCX_02_M01420 TRANSFAC + 140792385 140792401 2.0E-06 TAGTAAATTATTTAAAG 17 V_ARID3A_04_M02735 TRANSFAC - 140792387 140792403 7.0E-06 ATCTTTAAATAATTTAC 17 V_TBP_06_M02814 TRANSFAC + 140792430 140792445 3.0E-06 GTAAAATATAATAATC 16 V_OCT_Q6_M00795 TRANSFAC - 140792427 140792437 6.0E-06 TATTTTACATA 11 V_GR_Q6_02_M01836 TRANSFAC - 140791284 140791296 9.0E-06 TTAAATGTTCTGT 13 V_ZFP105_04_M02931 TRANSFAC - 140792387 140792403 7.0E-06 ATCTTTAAATAATTTAC 17 V_BRN4_01_M01473 TRANSFAC - 140792385 140792401 7.0E-06 CTTTAAATAATTTACTA 17 V_BRN4_01_M01473 TRANSFAC + 140792386 140792402 2.0E-06 AGTAAATTATTTAAAGA 17 V_HNF1_01_M00132 TRANSFAC + 140792386 140792400 2.0E-06 AGTAAATTATTTAAA 15 V_FOXL1_02_M02857 TRANSFAC + 140787457 140787472 8.0E-06 AATTCAAAATGAAAAA 16 V_FOXL1_02_M02857 TRANSFAC + 140792427 140792442 8.0E-06 TATGTAAAATATAATA 16 V_FOXL1_02_M02857 TRANSFAC + 140792432 140792447 7.0E-06 AAAATATAATAATCCA 16 V_LMX1B_01_M01363 TRANSFAC + 140792387 140792403 6.0E-06 GTAAATTATTTAAAGAT 17 V_LMX1B_01_M01363 TRANSFAC - 140792388 140792404 8.0E-06 TATCTTTAAATAATTTA 17 V_SOX18_04_M02905 TRANSFAC + 140787451 140787466 5.0E-06 AGACCGAATTCAAAAT 16 V_HOXD8_01_M01432 TRANSFAC + 140792388 140792404 9.0E-06 TAAATTATTTAAAGATA 17 V_SIX6_08_M02897 TRANSFAC - 140787430 140787446 6.0E-06 AATGTATATATTCTTCG 17 V_SIX6_08_M02897 TRANSFAC + 140787431 140787447 5.0E-06 GAAGAATATATACATTT 17 V_PIT1_Q6_M00802 TRANSFAC + 140787457 140787474 1.0E-06 AATTCAAAATGAAAAACC 18 V_GATA1_02_M00126 TRANSFAC + 140792396 140792409 0.0E+00 TTAAAGATAGGAGT 14 V_HNF1A_01_M02162 TRANSFAC + 140792386 140792399 3.0E-06 AGTAAATTATTTAA 14 V_IRXB3_01_M01377 TRANSFAC + 140791284 140791300 8.0E-06 ACAGAACATTTAAAAAT 17 V_BRCA_01_M01082 TRANSFAC - 140787584 140787591 1.0E-05 TTCTGTTG 8 V_BRCA_01_M01082 TRANSFAC - 140792446 140792453 1.0E-05 TTCTGTTG 8 V_SOX14_03_M02798 TRANSFAC + 140792430 140792445 0.0E+00 GTAAAATATAATAATC 16 V_SOX14_03_M02798 TRANSFAC - 140792430 140792445 2.0E-06 GATTATTATATTTTAC 16 V_SOX14_03_M02798 TRANSFAC - 140792433 140792448 5.0E-06 TTGGATTATTATATTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.