Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NXF3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 56000 nuclear RNA export factor 3 chrX - 102347522 - 102353022 102348022 Transcription Factor Binding Sites   Download all TFBS in the NXF3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX - 102348124 102348137 8.0E-06 AAGAACAGGAAGTT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 102348124 102348137 4.0E-06 AAGAACAGGAAGTT 14 Stat3_MA0144.1 JASPAR + 102348068 102348077 9.0E-06 TTACAGGAAG 10 ELF5_ETS_full_monomeric_11_1 SELEX - 102348124 102348134 4.0E-06 AACAGGAAGTT 11 SPI1_ETS_full_monomeric_14_1 SELEX - 102348124 102348137 5.0E-06 AAGAACAGGAAGTT 14 V_AR_Q6_01_M01996 TRANSFAC + 102348123 102348137 1.0E-06 TAACTTCCTGTTCTT 15 V_AP2_Q6_01_M00915 TRANSFAC - 102347995 102348007 1.0E-06 CCGTCCCCAGGCC 13 V_PU1_Q4_M01172 TRANSFAC + 102348118 102348136 2.0E-06 AGAATTAACTTCCTGTTCT 19 V_AR_03_M00956 TRANSFAC + 102348116 102348142 1.0E-05 ACAGAATTAACTTCCTGTTCTTACCAC 27 V_CETS1P54_02_M00074 TRANSFAC - 102348123 102348135 1.0E-06 GAACAGGAAGTTA 13 V_SRF_C_M00215 TRANSFAC - 102347959 102347973 1.0E-06 GCCCTATAAGGACAT 15 V_ETS_Q4_M00771 TRANSFAC + 102348121 102348132 4.0E-06 ATTAACTTCCTG 12 V_PR_Q2_M00960 TRANSFAC - 102348130 102348139 9.0E-06 GTAAGAACAG 10 V_ELF5_01_M01197 TRANSFAC - 102348124 102348134 6.0E-06 AACAGGAAGTT 11 V_SPIB_01_M01204 TRANSFAC - 102348121 102348137 1.0E-06 AAGAACAGGAAGTTAAT 17 V_SRF_Q5_02_M01007 TRANSFAC + 102347958 102347976 2.0E-06 AATGTCCTTATAGGGCTCT 19 V_ELK1_01_M00007 TRANSFAC - 102348121 102348136 0.0E+00 AGAACAGGAAGTTAAT 16 V_GLI3_01_M01596 TRANSFAC + 102347989 102347999 9.0E-06 CTGTGTGGCCT 11 V_ELF1_Q6_M00746 TRANSFAC - 102348125 102348136 2.0E-06 AGAACAGGAAGT 12 V_GABPBETA_Q3_M01876 TRANSFAC - 102348123 102348133 8.0E-06 ACAGGAAGTTA 11 V_EHF_06_M02745 TRANSFAC - 102348123 102348137 3.0E-06 AAGAACAGGAAGTTA 15 V_SRF_01_M00152 TRANSFAC + 102347959 102347976 3.0E-06 ATGTCCTTATAGGGCTCT 18 V_ETS1_B_M00339 TRANSFAC + 102348070 102348084 6.0E-06 ACAGGAAGTTCCTTC 15 V_SRF_Q5_01_M00922 TRANSFAC - 102347958 102347972 4.0E-06 CCCTATAAGGACATT 15 V_SRF_Q4_M00810 TRANSFAC - 102347956 102347973 1.0E-06 GCCCTATAAGGACATTGG 18 V_SRF_02_M01257 TRANSFAC - 102347957 102347974 1.0E-06 AGCCCTATAAGGACATTG 18 V_CDPCR3_01_M00105 TRANSFAC + 102348243 102348257 2.0E-06 CCCAGATACTTATTG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.