Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

KLHL9


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55958 kelch-like family member 9 chr9 -21334929 - 21340429 21335429

Transcription Factor Binding Sites

 
Download all TFBS in the KLHL9 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX - 21336604 21336618 2.0E-06 TTGGAAACAATAGAA 15
POU3F3_POU_DBD_monomeric_12_1 SELEX + 21335678 21335689 0.0E+00 ATGCATAATTTT 12
Arx_homeodomain_DBD_dimeric_13_1 SELEX + 21335064 21335076 1.0E-05 CAAATCTGATTAT 13
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 21336600 21336616 0.0E+00 GGAAACAATAGAAAACA 17
POU3F2_POU_DBD_monomeric_13_1 SELEX + 21335677 21335689 1.0E-06 AATGCATAATTTT 13
POU3F4_POU_DBD_monomeric_11_1 SELEX + 21335679 21335689 0.0E+00 TGCATAATTTT 11
Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 21335064 21335076 8.0E-06 CAAATCTGATTAT 13
SOX9_HMG_DBD_monomeric_9_1 SELEX - 21336606 21336614 4.0E-06 AAACAATAG 9
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 21331822 21331835 2.0E-06 AGATAACATTTTCT 14
OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 21335063 21335077 6.0E-06 AATAATCAGATTTGA 15
Ar_MA0007.1 JASPAR + 21331713 21331734 1.0E-06 GTAAGACCATAGTGTTCCAGAG 22
FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 21331822 21331835 1.0E-06 AGATAACATTTTCT 14
RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 21335422 21335439 1.0E-05 CAGCCGCAGTAGCCGCTA 18
ALX3_homeodomain_full_dimeric_13_1 SELEX + 21335064 21335076 6.0E-06 CAAATCTGATTAT 13
SOX2_HMG_full_dimeric_15_1 SELEX + 21335722 21335736 2.0E-06 TTGAATAACAGTGAA 15
PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 21335065 21335075 8.0E-06 AAATCTGATTA 11
Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 21335064 21335076 9.0E-06 CAAATCTGATTAT 13
Otx1_homeodomain_DBD_dimeric_15_1 SELEX + 21335063 21335077 9.0E-06 TCAAATCTGATTATT 15
Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 21335063 21335077 6.0E-06 AATAATCAGATTTGA 15
TBX4_TBX_DBD_dimeric_20_1 SELEX + 21335615 21335634 8.0E-06 AAGTGTGTTATGCTGCACGT 20
SOX14_HMG_DBD_dimeric_15_1 SELEX + 21335722 21335736 7.0E-06 TTGAATAACAGTGAA 15
POU1F1_POU_DBD_monomeric_17_1 SELEX + 21335675 21335691 2.0E-06 CAAATGCATAATTTTTC 17
PRRX1_homeodomain_full_dimeric_11_1 SELEX + 21335065 21335075 1.0E-05 AAATCTGATTA 11
CART1_homeodomain_DBD_dimeric_13_1 SELEX + 21335064 21335076 1.0E-05 CAAATCTGATTAT 13
POU3F1_POU_DBD_monomeric_12_2 SELEX + 21335678 21335689 0.0E+00 ATGCATAATTTT 12
Hltf_MA0109.1 JASPAR - 21335638 21335647 0.0E+00 AAACTTATAT 10
Pou5f1_MA0142.1 JASPAR - 21335720 21335734 6.0E-06 CACTGTTATTCAAAA 15
FOXI1_forkhead_full_dimeric_17_1 SELEX + 21334767 21334783 9.0E-06 GTATTGCTGGTAAAAAA 17
SOX18_HMG_full_dimeric_15_3 SELEX + 21335722 21335736 9.0E-06 TTGAATAACAGTGAA 15
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 21335477 21335487 8.0E-06 CTTCCCCACCC 11
PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 21335065 21335075 9.0E-06 AAATCTGATTA 11
SOX9_MA0077.1 JASPAR - 21336606 21336614 7.0E-06 AAACAATAG 9
ETV6_ETS_full_dimeric_15_1 SELEX - 21335154 21335168 4.0E-06 CCCGAAGCGGAACTG 15
Sox2_MA0143.1 JASPAR - 21335721 21335735 8.0E-06 TCACTGTTATTCAAA 15
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 21331715 21331731 8.0E-06 AAGACCATAGTGTTCCA 17
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 21331715 21331731 5.0E-06 TGGAACACTATGGTCTT 17
TBX1_TBX_DBD_dimeric_20_1 SELEX + 21335603 21335622 8.0E-06 ATGTGTGCAAGCAAGTGTGT 20
TBX1_TBX_DBD_dimeric_20_1 SELEX - 21336683 21336702 4.0E-06 TTGTGTTGAATAAGGTGACA 20
Sox1_HMG_DBD_dimeric_15_2 SELEX + 21335722 21335736 8.0E-06 TTGAATAACAGTGAA 15
Zfx_MA0146.1 JASPAR + 21335316 21335329 6.0E-06 CAGGCCTGGGCCTG 14
Zfx_MA0146.1 JASPAR - 21335316 21335329 3.0E-06 CAGGCCCAGGCCTG 14
RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 21335422 21335439 6.0E-06 CAGCCGCAGTAGCCGCTA 18
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 21336593 21336606 7.0E-06 GAAAACATTCAAAA 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 21336600 21336613 6.0E-06 AACAATAGAAAACA 14
V_RUSH1A_02_M01107 TRANSFAC - 21335638 21335647 0.0E+00 AAACTTATAT 10
V_FOXP1_01_M00987 TRANSFAC + 21336593 21336612 3.0E-06 TTTTGAATGTTTTCTATTGT 20
V_FOXP3_Q4_M00992 TRANSFAC + 21335640 21335656 4.0E-06 ATAAGTTTTTCGCATAT 17
V_POU3F3_01_M03090 TRANSFAC - 21335672 21335688 8.0E-06 AAATTATGCATTTGGGG 17
V_POU3F3_01_M03090 TRANSFAC + 21335673 21335689 6.0E-06 CCCAAATGCATAATTTT 17
V_OSF2_Q6_M00731 TRANSFAC + 21335043 21335050 1.0E-05 ACCACAAA 8
V_BCL6_01_M01183 TRANSFAC + 21335634 21335649 4.0E-06 TTTGATATAAGTTTTT 16
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 21334914 21334925 2.0E-06 AATGTTTTACAG 12
V_POU5F1_02_M02245 TRANSFAC - 21335720 21335734 6.0E-06 CACTGTTATTCAAAA 15
V_AR_Q6_01_M01996 TRANSFAC - 21334943 21334957 0.0E+00 GAGCTTTCTGTTCTT 15
V_MAFB_03_M02879 TRANSFAC + 21335675 21335689 5.0E-06 CAAATGCATAATTTT 15
V_OCTAMER_01_M01324 TRANSFAC - 21335672 21335688 8.0E-06 AAATTATGCATTTGGGG 17
V_OCTAMER_01_M01324 TRANSFAC + 21335673 21335689 6.0E-06 CCCAAATGCATAATTTT 17
V_ZFP740_03_M02834 TRANSFAC - 21335470 21335485 1.0E-05 TCCCCACCCCCACCCT 16
V_SRY_02_M00160 TRANSFAC - 21336605 21336616 5.0E-06 GGAAACAATAGA 12
V_POU1F1_Q6_M00744 TRANSFAC + 21335678 21335687 3.0E-06 ATGCATAATT 10
V_GATA_C_M00203 TRANSFAC - 21334959 21334969 8.0E-06 TGATAAGGAAA 11
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 21335463 21335478 3.0E-06 CAGCGGGAGGGTGGGG 16
V_AR_03_M00956 TRANSFAC - 21334938 21334964 2.0E-06 AGGAAACGAGCTTTCTGTTCTTTCTGG 27
V_SOX13_03_M02797 TRANSFAC - 21336603 21336618 9.0E-06 TTGGAAACAATAGAAA 16
V_SOX7_03_M02807 TRANSFAC - 21336599 21336620 1.0E-06 CCTTGGAAACAATAGAAAACAT 22
V_PR_Q2_M00960 TRANSFAC + 21334941 21334950 1.0E-06 GAAAGAACAG 10
V_OCT1_03_M00137 TRANSFAC - 21335067 21335079 3.0E-06 CTAATAATCAGAT 13
V_FKLF_Q5_M01837 TRANSFAC + 21335406 21335415 2.0E-06 GGGGTGGGAG 10
V_FKLF_Q5_M01837 TRANSFAC + 21335543 21335552 5.0E-06 GGGGTGGGCG 10
V_STAT1_01_M00224 TRANSFAC - 21335370 21335390 9.0E-06 TAGGCTTTTCCGGAAGGAGCG 21
V_PAX5_01_M00143 TRANSFAC + 21335161 21335188 1.0E-06 GCTTCGGGCAAGGAAGAGGCGCCGCCAC 28
V_SOX18_03_M02801 TRANSFAC + 21336604 21336619 4.0E-06 TTCTATTGTTTCCAAG 16
V_OCT1_04_M00138 TRANSFAC - 21335713 21335735 1.0E-06 TCACTGTTATTCAAAAAAACAGA 23
V_OCT1_04_M00138 TRANSFAC - 21336586 21336608 6.0E-06 TAGAAAACATTCAAAACAGATGA 23
V_GR_Q6_M00192 TRANSFAC - 21335593 21335611 7.0E-06 TGCACACATTCTGTCCTAT 19
V_MUSCLE_INI_B_M00321 TRANSFAC + 21335353 21335373 6.0E-06 TAGCCCCAACACCGAGCCGCT 21
V_RREB1_01_M00257 TRANSFAC - 21335471 21335484 5.0E-06 CCCCACCCCCACCC 14
V_OCT4_02_M01124 TRANSFAC - 21334850 21334864 5.0E-06 TTTCACATGAAAGTG 15
V_SOX11_03_M02795 TRANSFAC - 21336602 21336618 9.0E-06 TTGGAAACAATAGAAAA 17
V_SOX9_B1_M00410 TRANSFAC - 21336604 21336617 4.0E-06 TGGAAACAATAGAA 14
V_FOXO1_Q5_M01216 TRANSFAC - 21335713 21335721 1.0E-05 AAAAACAGA 9
V_IRF7_01_M00453 TRANSFAC + 21331754 21331771 5.0E-06 TGGGAATCTGAAGTTGGT 18
V_GR_Q6_02_M01836 TRANSFAC - 21334942 21334954 0.0E+00 CTTTCTGTTCTTT 13
V_SOX15_03_M02799 TRANSFAC - 21336602 21336618 1.0E-06 TTGGAAACAATAGAAAA 17
V_IPF1_05_M01255 TRANSFAC - 21336593 21336604 5.0E-06 AAACATTCAAAA 12
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 21335469 21335477 8.0E-06 GAGGGTGGG 9
V_ZFP281_01_M01597 TRANSFAC + 21335474 21335484 1.0E-06 TGGGGGTGGGG 11
V_SOX8_03_M02808 TRANSFAC + 21336602 21336618 1.0E-06 TTTTCTATTGTTTCCAA 17
V_DMRT2_01_M01147 TRANSFAC - 21336596 21336611 9.0E-06 CAATAGAAAACATTCA 16
V_SOX2_01_M02246 TRANSFAC - 21335721 21335735 8.0E-06 TCACTGTTATTCAAA 15
V_ZFP281_04_M02831 TRANSFAC - 21335472 21335486 1.0E-06 TTCCCCACCCCCACC 15
V_RFX3_05_M02892 TRANSFAC - 21334831 21334853 9.0E-06 AGTGTCCCTTGGTAACGGCGAAA 23
V_PR_02_M00957 TRANSFAC - 21334938 21334964 7.0E-06 AGGAAACGAGCTTTCTGTTCTTTCTGG 27
V_RFX3_04_M02788 TRANSFAC - 21334831 21334853 7.0E-06 AGTGTCCCTTGGTAACGGCGAAA 23
V_SOX15_04_M02903 TRANSFAC - 21335722 21335736 7.0E-06 TTCACTGTTATTCAA 15
V_SRY_05_M02917 TRANSFAC - 21336603 21336619 6.0E-06 CTTGGAAACAATAGAAA 17
V_MEF2_01_M00006 TRANSFAC + 21335019 21335034 7.0E-06 CACTGAAAATCACCCT 16
V_UF1H3BETA_Q6_M01068 TRANSFAC + 21335472 21335485 0.0E+00 GGTGGGGGTGGGGA 14
V_HMEF2_Q6_M00406 TRANSFAC + 21335019 21335034 1.0E-05 CACTGAAAATCACCCT 16
V_TFE_Q6_M01029 TRANSFAC + 21334855 21334862 1.0E-05 TCATGTGA 8
V_AR_01_M00481 TRANSFAC - 21331716 21331730 7.0E-06 GGAACACTATGGTCT 15
V_MIF1_01_M00279 TRANSFAC - 21334835 21334852 8.0E-06 GTGTCCCTTGGTAACGGC 18
V_PPARA_01_M00242 TRANSFAC - 21331762 21331781 8.0E-06 CAAAGACAGGACCAACTTCA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL