Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ASH1L Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55870 ash1 (absent, small, or homeotic)-like (Drosophila) chr1 - 155531824 - 155537324 155532324 Transcription Factor Binding Sites   Download all TFBS in the ASH1L promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 155533714 155533722 9.0E-06 TTAATAAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 155533296 155533308 0.0E+00 GTTAACAACAACA 13 Foxa2_MA0047.2 JASPAR - 155533722 155533733 8.0E-06 TGTTTGCTTTGT 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 155533894 155533905 6.0E-06 CAGAATAAATTA 12 FOXA1_MA0148.1 JASPAR - 155533723 155533733 1.0E-06 TGTTTGCTTTG 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 155533706 155533718 6.0E-06 CCAAGGAGTTAAT 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 155533289 155533305 9.0E-06 AACAACAACAAAAAGCA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 155533724 155533735 4.0E-06 AAAGCAAACATA 12 ELF4_ETS_full_monomeric_12_1 SELEX + 155533959 155533970 6.0E-06 ATCCAGGAAGTA 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 155533745 155533760 7.0E-06 GGTTTCTGTGGCTACT 16 YY1_C2H2_full_monomeric_11_1 SELEX - 155532202 155532212 5.0E-06 GCCGCCATTTT 11 POU3F4_POU_DBD_monomeric_11_1 SELEX + 155533895 155533905 4.0E-06 AGAATAAATTA 11 EWSR1-FLI1_MA0149.1 JASPAR - 155532325 155532342 8.0E-06 GAAAGAACGCAAGGAGGA 18 NR2F1_MA0017.1 JASPAR - 155533841 155533854 7.0E-06 TAAACTTTGGAATT 14 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 155533713 155533722 8.0E-06 GTTAATAAAA 10 ELF3_ETS_full_monomeric_13_1 SELEX + 155533959 155533971 3.0E-06 ATCCAGGAAGTAA 13 SP1_MA0079.2 JASPAR + 155531811 155531820 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 155532638 155532647 7.0E-06 CCCCGCCCCC 10 FOXI1_MA0042.1 JASPAR + 155533761 155533772 1.0E-06 GAATATTTGTTT 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 155533841 155533856 8.0E-06 AATTCCAAAGTTTACT 16 YY2_C2H2_full_monomeric_11_1 SELEX - 155532202 155532212 1.0E-06 GCCGCCATTTT 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 155533841 155533855 7.0E-06 AATTCCAAAGTTTAC 15 Foxd3_MA0041.1 JASPAR + 155533761 155533772 0.0E+00 GAATATTTGTTT 12 IRF9_IRF_full_trimeric_15_1 SELEX - 155533923 155533937 9.0E-06 AAGGAAAGGGAAACC 15 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 155533769 155533785 6.0E-06 GTTTCTCAAAACACTTG 17 EHF_ETS_full_monomeric_12_1 SELEX + 155533959 155533970 6.0E-06 ATCCAGGAAGTA 12 Myf_MA0055.1 JASPAR + 155532233 155532244 8.0E-06 CGGCAGCAGCAG 12 ELF5_ETS_full_monomeric_11_1 SELEX + 155533960 155533970 9.0E-06 TCCAGGAAGTA 11 SOX21_HMG_DBD_dimeric_16_1 SELEX + 155533682 155533697 8.0E-06 TGTAATTGGTAGTGTT 16 ELF3_ETS_DBD_monomeric_12_1 SELEX + 155533959 155533970 4.0E-06 ATCCAGGAAGTA 12 IRF3_IRF_full_trimeric_21_1 SELEX - 155533922 155533942 1.0E-06 ATGTGAAGGAAAGGGAAACCC 21 Nobox_MA0125.1 JASPAR + 155533684 155533691 7.0E-06 TAATTGGT 8 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 155533713 155533723 1.0E-05 GTTAATAAAAC 11 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 155533296 155533308 3.0E-06 GTTAACAACAACA 13 RREB1_MA0073.1 JASPAR + 155532435 155532454 0.0E+00 CCACCAACCACCACCTTCGG 20 IRF2_MA0051.1 JASPAR - 155533918 155533935 3.0E-06 GGAAAGGGAAACCCAAGT 18 Zfx_MA0146.1 JASPAR - 155532980 155532993 6.0E-06 GCCGCCGCGGCCTC 14 V_ELF5_02_M01980 TRANSFAC + 155533961 155533970 5.0E-06 CCAGGAAGTA 10 V_ELF5_03_M02057 TRANSFAC + 155533961 155533970 8.0E-06 CCAGGAAGTA 10 V_FOXP1_01_M00987 TRANSFAC - 155533717 155533736 5.0E-06 CTATGTTTGCTTTGTTTTAT 20 V_FLI1_Q6_M01208 TRANSFAC + 155533962 155533972 4.0E-06 CAGGAAGTAAT 11 V_HMGIY_Q3_M01010 TRANSFAC - 155533835 155533849 4.0E-06 TTTGGAATTATTTGT 15 V_FOXD3_01_M00130 TRANSFAC + 155533761 155533772 0.0E+00 GAATATTTGTTT 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 155533982 155533993 8.0E-06 ACTGTTCAAAAG 12 V_ETS_B_M00340 TRANSFAC - 155533003 155533016 6.0E-06 GGCAGGAAACGACT 14 V_ETS_B_M00340 TRANSFAC + 155533960 155533973 0.0E+00 TCCAGGAAGTAATT 14 V_FOXO4_02_M00476 TRANSFAC + 155533298 155533311 7.0E-06 TTGTTGTTAACCCT 14 V_ESE1_01_M01977 TRANSFAC + 155533961 155533970 8.0E-06 CCAGGAAGTA 10 V_IK_Q5_M01169 TRANSFAC + 155534040 155534049 3.0E-06 TTTGGGAGGC 10 V_ZFP740_04_M02938 TRANSFAC - 155533219 155533235 6.0E-06 GGAATCCCCCCGGAGGC 17 V_EGR_Q6_M00807 TRANSFAC - 155532639 155532649 6.0E-06 GTGGGGGCGGG 11 V_IRF_Q6_01_M00972 TRANSFAC - 155533924 155533934 1.0E-05 GAAAGGGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 155533921 155533936 3.0E-06 AGGAAAGGGAAACCCA 16 V_PLAG1_02_M01973 TRANSFAC + 155532631 155532646 9.0E-06 CCCCCTTCCCCGCCCC 16 V_HNF3_Q6_01_M01012 TRANSFAC - 155533721 155533738 1.0E-06 GCCTATGTTTGCTTTGTT 18 V_SP1_03_M02281 TRANSFAC + 155531811 155531820 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 155532638 155532647 7.0E-06 CCCCGCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 155533724 155533736 5.0E-06 CTATGTTTGCTTT 13 V_PITX2_Q6_M02114 TRANSFAC + 155534026 155534035 1.0E-06 TGTAATCCCA 10 V_NERF_Q2_M00531 TRANSFAC + 155533959 155533976 9.0E-06 ATCCAGGAAGTAATTCAG 18 V_HOXD13_01_M01404 TRANSFAC + 155533711 155533726 4.0E-06 GAGTTAATAAAACAAA 16 V_LYF1_01_M00141 TRANSFAC + 155534040 155534048 9.0E-06 TTTGGGAGG 9 V_PAX5_02_M00144 TRANSFAC + 155532783 155532810 6.0E-06 GAAGGGACGGGCCGAGCGGGTCGGGGCT 28 V_ETS_Q4_M00771 TRANSFAC - 155533962 155533973 1.0E-06 AATTACTTCCTG 12 V_MYF_01_M01302 TRANSFAC + 155532233 155532244 8.0E-06 CGGCAGCAGCAG 12 V_LMX1_01_M01409 TRANSFAC + 155533710 155533726 9.0E-06 GGAGTTAATAAAACAAA 17 V_ZFP105_03_M02827 TRANSFAC - 155533292 155533306 3.0E-06 TAACAACAACAAAAA 15 V_COUP_01_M00158 TRANSFAC - 155533841 155533854 7.0E-06 TAAACTTTGGAATT 14 V_STAF_01_M00262 TRANSFAC + 155532338 155532359 6.0E-06 CTTTCCCACCGTCCCCCGCTCC 22 V_STAF_01_M00262 TRANSFAC + 155532723 155532744 9.0E-06 GCCTCCCACAATCCCCCCCGCG 22 V_SOX7_04_M02911 TRANSFAC - 155533828 155533849 2.0E-06 TTTGGAATTATTTGTGGACTTT 22 V_KROX_Q6_M00982 TRANSFAC + 155532639 155532652 7.0E-06 CCCGCCCCCACGGC 14 V_ZBP89_Q4_M01816 TRANSFAC + 155531812 155531821 4.0E-06 CCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC + 155532624 155532633 6.0E-06 TCCTCCCCCC 10 V_HOXB9_01_M01426 TRANSFAC + 155533711 155533726 8.0E-06 GAGTTAATAAAACAAA 16 V_FOXK1_04_M02856 TRANSFAC - 155533293 155533307 0.0E+00 TTAACAACAACAAAA 15 V_IRF3_Q3_M01279 TRANSFAC + 155533921 155533933 2.0E-06 TGGGTTTCCCTTT 13 V_HNF3A_01_M01261 TRANSFAC + 155533725 155533734 5.0E-06 AAGCAAACAT 10 V_MAZ_Q6_01_M02023 TRANSFAC - 155531807 155531820 2.0E-06 GGGGGAGGGGAGAG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 155532619 155532632 6.0E-06 GGGGGAGGAGAGAA 14 V_HNF3_Q6_M00791 TRANSFAC + 155533723 155533735 2.0E-06 CAAAGCAAACATA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 155533723 155533733 2.0E-06 TGTTTGCTTTG 11 V_IRF_Q6_M00772 TRANSFAC + 155533920 155533934 4.0E-06 TTGGGTTTCCCTTTC 15 V_EHF_02_M01974 TRANSFAC + 155533961 155533970 3.0E-06 CCAGGAAGTA 10 V_ISRE_01_M00258 TRANSFAC + 155533922 155533936 4.0E-06 GGGTTTCCCTTTCCT 15 V_CMYB_01_M00004 TRANSFAC - 155532652 155532669 3.0E-06 CGTGGCGGCGGTTGGTGG 18 V_YY1_Q6_02_M01035 TRANSFAC - 155532202 155532212 0.0E+00 GCCGCCATTTT 11 V_REX1_03_M01744 TRANSFAC + 155532202 155532213 1.0E-06 AAAATGGCGGCG 12 V_SP1SP3_Q4_M01219 TRANSFAC + 155532628 155532638 7.0E-06 CCCCCCCCTTC 11 V_GRE_C_M00205 TRANSFAC + 155533446 155533461 4.0E-06 TTTTCATTCAGTTCTG 16 V_TEL2_Q6_M00678 TRANSFAC - 155533962 155533971 1.0E-06 TTACTTCCTG 10 V_CDC5_01_M00478 TRANSFAC + 155533711 155533722 3.0E-06 GAGTTAATAAAA 12 V_ARID3A_04_M02735 TRANSFAC + 155533710 155533726 4.0E-06 GGAGTTAATAAAACAAA 17 V_SOX11_03_M02795 TRANSFAC + 155533716 155533732 3.0E-06 AATAAAACAAAGCAAAC 17 V_HNF4A_02_M02868 TRANSFAC + 155533824 155533839 2.0E-06 GATTAAAGTCCACAAA 16 V_IRF7_01_M00453 TRANSFAC - 155533920 155533937 9.0E-06 AAGGAAAGGGAAACCCAA 18 V_TFIII_Q6_M00706 TRANSFAC + 155532275 155532283 6.0E-06 AGAGGGAGG 9 V_TFIII_Q6_M00706 TRANSFAC - 155532898 155532906 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 155532637 155532647 9.0E-06 TCCCCGCCCCC 11 V_EHF_03_M02052 TRANSFAC + 155533961 155533970 5.0E-06 CCAGGAAGTA 10 V_YY1_03_M02044 TRANSFAC - 155532201 155532212 0.0E+00 GCCGCCATTTTG 12 V_GABPBETA_Q3_M01876 TRANSFAC + 155532779 155532789 1.0E-05 AGAGGAAGGGA 11 V_EHF_06_M02745 TRANSFAC + 155533957 155533971 4.0E-06 GGATCCAGGAAGTAA 15 V_FAC1_01_M00456 TRANSFAC - 155533292 155533305 0.0E+00 AACAACAACAAAAA 14 V_FOXL1_02_M02857 TRANSFAC + 155533714 155533729 1.0E-06 TTAATAAAACAAAGCA 16 V_FOXJ3_06_M02855 TRANSFAC + 155533713 155533729 3.0E-06 GTTAATAAAACAAAGCA 17 V_PLAG1_01_M01778 TRANSFAC + 155532133 155532148 3.0E-06 GGGGCAAACTGAGGGG 16 V_PXR_Q2_M00964 TRANSFAC + 155533710 155533721 4.0E-06 GGAGTTAATAAA 12 V_FPM315_01_M01587 TRANSFAC - 155532593 155532604 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 155532596 155532607 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 155532599 155532610 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 155532909 155532920 3.0E-06 GGAGGAGGAGGA 12 V_FOXA2_03_M02260 TRANSFAC - 155533722 155533733 8.0E-06 TGTTTGCTTTGT 12 V_PITX2_Q2_M00482 TRANSFAC + 155534026 155534036 1.0E-06 TGTAATCCCAG 11 V_FOX_Q2_M00809 TRANSFAC - 155533724 155533736 3.0E-06 CTATGTTTGCTTT 13 V_ESE1_02_M02055 TRANSFAC + 155533961 155533970 3.0E-06 CCAGGAAGTA 10 V_ETS1_B_M00339 TRANSFAC + 155533961 155533975 1.0E-06 CCAGGAAGTAATTCA 15 V_ZFP281_01_M01597 TRANSFAC - 155531811 155531821 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 155532638 155532648 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 155531809 155531823 2.0E-06 CTCCCCTCCCCCATC 15 V_ZFP281_04_M02831 TRANSFAC + 155532624 155532638 7.0E-06 TCCTCCCCCCCCTTC 15 V_SRF_06_M02916 TRANSFAC + 155533713 155533729 4.0E-06 GTTAATAAAACAAAGCA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 155532325 155532342 8.0E-06 GAAAGAACGCAAGGAGGA 18 V_FOXJ2_01_M00422 TRANSFAC - 155533759 155533776 8.0E-06 TGAGAAACAAATATTCAG 18 V_PAX4_02_M00377 TRANSFAC + 155533897 155533907 7.0E-06 AATAAATTACC 11 V_SP1_Q2_01_M00933 TRANSFAC + 155532638 155532647 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 155531810 155531823 2.0E-06 GATGGGGGAGGGGA 14 V_HOXA10_01_M01464 TRANSFAC + 155533711 155533726 4.0E-06 GAGTTAATAAAACAAA 16 V_HOXD10_01_M01375 TRANSFAC + 155533711 155533727 1.0E-06 GAGTTAATAAAACAAAG 17 V_SOX9_Q4_M01284 TRANSFAC + 155533720 155533730 6.0E-06 AAACAAAGCAA 11 V_RFX1_02_M00281 TRANSFAC - 155533744 155533761 4.0E-06 CAGTAGCCACAGAAACCT 18 V_NANOG_02_M01247 TRANSFAC + 155533714 155533733 0.0E+00 TTAATAAAACAAAGCAAACA 20 V_ESE1_Q3_M01214 TRANSFAC + 155533961 155533970 3.0E-06 CCAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.