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CDK5RAP2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55755 CDK5 regulatory subunit associated protein 2 chr9 - 123341948 - 123347448 123342448 Transcription Factor Binding Sites   Download all TFBS in the CDK5RAP2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 123346711 123346728 9.0E-06 AGGATCAATATATACGCA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 123346711 123346728 6.0E-06 TGCGTATATATTGATCCT 18 HSF2_HSF_DBD_trimeric_13_1 SELEX + 123342745 123342757 6.0E-06 TTCTAGAATAATG 13 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 123346568 123346587 1.0E-06 ATTTCCTCAGACAAGGTCAT 20 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 123346568 123346587 0.0E+00 ATGACCTTGTCTGAGGAAAT 20 IRF7_IRF_DBD_dimeric_14_1 SELEX + 123346343 123346356 1.0E-06 TAGAAACTGAAAAT 14 ZNF713_C2H2_full_monomeric_17_1 SELEX + 123346531 123346547 8.0E-06 TTGACAACAGCCACCCA 17 FOXA1_MA0148.1 JASPAR + 123342736 123342746 2.0E-06 TGTTTGCTTTT 11 FOXA1_MA0148.1 JASPAR - 123342845 123342855 8.0E-06 TGTTTGCCTTG 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 123346348 123346359 7.0E-06 ACTGAAAATAGA 12 IRF8_IRF_full_dimeric_14_1 SELEX + 123346343 123346356 4.0E-06 TAGAAACTGAAAAT 14 ZBTB7B_C2H2_full_monomeric_12_1 SELEX + 123342173 123342184 2.0E-06 ACGACCACCAAT 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 123346484 123346495 5.0E-06 GGTGACGTCACT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 123346484 123346495 5.0E-06 GGTGACGTCACT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 123346484 123346495 4.0E-06 AGTGACGTCACC 12 IRF7_IRF_DBD_trimeric_17_1 SELEX + 123346346 123346362 6.0E-06 AAACTGAAAATAGAATC 17 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 123346268 123346281 4.0E-06 CTAATCATAATGAG 14 JDP2_bZIP_full_dimeric_12_1 SELEX + 123346484 123346495 6.0E-06 GGTGACGTCACT 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 123346484 123346495 5.0E-06 AGTGACGTCACC 12 RUNX3_RUNX_full_monomeric_10_1 SELEX + 123342399 123342408 1.0E-05 AAACCACAGA 10 RUNX3_RUNX_full_monomeric_10_1 SELEX + 123346546 123346555 5.0E-06 CAACCACAAA 10 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 123342777 123342794 1.0E-06 AGTTTCAACTTAAGGTCA 18 IRF1_MA0050.1 JASPAR + 123346345 123346356 7.0E-06 GAAACTGAAAAT 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 123342344 123342359 8.0E-06 CCCCGCCCCCTCCACC 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX + 123342399 123342416 9.0E-06 AAACCACAGACGCCGCCA 18 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 123346704 123346713 9.0E-06 CCTATAAAAA 10 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 123342777 123342793 6.0E-06 GTTTCAACTTAAGGTCA 17 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 123346483 123346496 4.0E-06 AGGTGACGTCACTA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 123346483 123346496 4.0E-06 TAGTGACGTCACCT 14 SP1_MA0079.2 JASPAR + 123342344 123342353 7.0E-06 CCCCGCCCCC 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 123342819 123342832 2.0E-06 TTGGAAAAATACTA 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 123346497 123346510 6.0E-06 CCACCAGCTGTTTG 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 123346497 123346510 3.0E-06 CAAACAGCTGGTGG 14 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 123342777 123342793 3.0E-06 GTTTCAACTTAAGGTCA 17 CREB3_bZIP_full_dimeric_14_1 SELEX + 123346483 123346496 2.0E-06 AGGTGACGTCACTA 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 123346483 123346496 1.0E-06 TAGTGACGTCACCT 14 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 123346578 123346587 5.0E-06 ACAAGGTCAT 10 YY2_C2H2_full_monomeric_11_1 SELEX + 123342410 123342420 4.0E-06 GCCGCCATCTT 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 123346704 123346713 4.0E-06 CCTATAAAAA 10 EN1_homeodomain_full_dimeric_14_1 SELEX + 123346275 123346288 1.0E-05 TGATTAGTCCATTG 14 IRF9_IRF_full_trimeric_15_1 SELEX + 123346342 123346356 1.0E-05 CTAGAAACTGAAAAT 15 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 123346577 123346587 5.0E-06 GACAAGGTCAT 11 ZBTB7C_C2H2_full_monomeric_12_1 SELEX + 123342173 123342184 2.0E-06 ACGACCACCAAT 12 TFAP4_bHLH_full_dimeric_10_1 SELEX + 123346499 123346508 4.0E-06 ACCAGCTGTT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 123346499 123346508 7.0E-06 AACAGCTGGT 10 Myf_MA0055.1 JASPAR - 123346498 123346509 3.0E-06 AAACAGCTGGTG 12 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 123346578 123346588 3.0E-06 ACAAGGTCATA 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 123346704 123346713 3.0E-06 CCTATAAAAA 10 IRF4_IRF_full_dimeric_15_1 SELEX + 123346343 123346357 2.0E-06 TAGAAACTGAAAATA 15 IRF5_IRF_full_dimeric_14_1 SELEX + 123346343 123346356 7.0E-06 TAGAAACTGAAAAT 14 RUNX1_MA0002.2 JASPAR - 123342399 123342409 0.0E+00 GTCTGTGGTTT 11 REST_MA0138.2 JASPAR - 123341718 123341738 7.0E-06 TTAAGAACCTTGGCTAGAGTT 21 IRF3_IRF_full_trimeric_21_1 SELEX + 123342683 123342703 9.0E-06 GGGAGATGGAAATGAATACAG 21 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 123342528 123342537 4.0E-06 CTTAGTTAAG 10 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 123346483 123346496 7.0E-06 AGGTGACGTCACTA 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 123346483 123346496 5.0E-06 TAGTGACGTCACCT 14 MSC_bHLH_full_dimeric_10_1 SELEX + 123346499 123346508 3.0E-06 ACCAGCTGTT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 123346499 123346508 9.0E-06 AACAGCTGGT 10 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 123346704 123346713 4.0E-06 CCTATAAAAA 10 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 123342399 123342416 1.0E-05 AAACCACAGACGCCGCCA 18 V_NFAT_Q4_01_M00935 TRANSFAC + 123342819 123342828 7.0E-06 TTGGAAAAAT 10 V_FOXP1_01_M00987 TRANSFAC - 123346683 123346702 3.0E-06 TTATTTTTGCTGTTAGTAAT 20 V_OSR1_03_M02784 TRANSFAC - 123346399 123346414 2.0E-06 CACTACAGTAGCAGGA 16 V_ZFP187_03_M02830 TRANSFAC - 123346275 123346288 5.0E-06 CAATGGACTAATCA 14 V_AML_Q6_M00769 TRANSFAC - 123342397 123342411 3.0E-06 GCGTCTGTGGTTTGA 15 V_BCL6_Q3_01_M02085 TRANSFAC + 123342743 123342752 2.0E-06 TTTTCTAGAA 10 V_HSF1_Q6_M01023 TRANSFAC + 123342419 123342435 5.0E-06 TTTCCCGGCGCTTCTTC 17 V_OSF2_Q6_M00731 TRANSFAC + 123346548 123346555 1.0E-05 ACCACAAA 8 V_MAFK_03_M02776 TRANSFAC + 123342856 123342870 2.0E-06 GTAATTTGCAGACTT 15 TAL1_TCF3_MA0091.1 JASPAR + 123346497 123346508 6.0E-06 CCACCAGCTGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 123346499 123346510 6.0E-06 CAAACAGCTGGT 12 V_YY1_02_M00069 TRANSFAC + 123342630 123342649 8.0E-06 CGGGTGCCATCTTTGTTGAG 20 V_ACAAT_B_M00309 TRANSFAC - 123342177 123342185 8.0E-06 CATTGGTGG 9 V_MAFB_05_M02775 TRANSFAC + 123342857 123342873 1.0E-06 TAATTTGCAGACTTAGT 17 V_AML3_Q6_M01856 TRANSFAC + 123346547 123346554 1.0E-05 AACCACAA 8 V_CREB_Q4_M00178 TRANSFAC - 123346484 123346495 9.0E-06 AGTGACGTCACC 12 V_ETS_B_M00340 TRANSFAC + 123346599 123346612 9.0E-06 GGGAGGAAGTAGCT 14 V_ZFP740_04_M02938 TRANSFAC + 123342304 123342320 6.0E-06 TAGTACCCCCCGCGATA 17 V_CREB_Q4_01_M00917 TRANSFAC + 123346483 123346493 4.0E-06 AGGTGACGTCA 11 V_IRF_Q6_01_M00972 TRANSFAC + 123346345 123346355 2.0E-06 GAAACTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 123346343 123346358 2.0E-06 TAGAAACTGAAAATAG 16 V_AP4_Q6_M00176 TRANSFAC - 123346499 123346508 8.0E-06 AACAGCTGGT 10 V_YY1_Q6_M00793 TRANSFAC + 123342413 123342421 7.0E-06 GCCATCTTT 9 V_YY1_Q6_M00793 TRANSFAC + 123342635 123342643 7.0E-06 GCCATCTTT 9 V_SP1_03_M02281 TRANSFAC + 123342344 123342353 7.0E-06 CCCCGCCCCC 10 V_JUNDM2_03_M02772 TRANSFAC + 123346482 123346497 6.0E-06 GAGGTGACGTCACTAC 16 V_JUNDM2_03_M02772 TRANSFAC - 123346482 123346497 9.0E-06 GTAGTGACGTCACCTC 16 V_NERF_Q2_M00531 TRANSFAC + 123346598 123346615 4.0E-06 TGGGAGGAAGTAGCTTGC 18 V_SP1_02_M01303 TRANSFAC - 123342342 123342352 8.0E-06 GGGGCGGGGAC 11 V_AIRE_02_M01000 TRANSFAC - 123342692 123342716 1.0E-06 GATTCCTGAGTGGCTGTATTCATTT 25 V_HOXD13_01_M01404 TRANSFAC - 123346701 123346716 6.0E-06 GATCCTATAAAAAGTT 16 V_NKX62_Q2_M00489 TRANSFAC - 123346561 123346572 1.0E-05 GAAATAATAATG 12 V_ETS_Q4_M00771 TRANSFAC - 123346601 123346612 6.0E-06 AGCTACTTCCTC 12 V_ELF4_04_M02850 TRANSFAC - 123346700 123346716 7.0E-06 GATCCTATAAAAAGTTA 17 V_SOX13_03_M02797 TRANSFAC + 123346709 123346724 7.0E-06 ATAGGATCAATATATA 16 V_MYF_01_M01302 TRANSFAC - 123346498 123346509 3.0E-06 AAACAGCTGGTG 12 V_HOXB13_01_M01467 TRANSFAC - 123346701 123346716 5.0E-06 GATCCTATAAAAAGTT 16 V_RUNX1_01_M02257 TRANSFAC - 123342399 123342409 0.0E+00 GTCTGTGGTTT 11 V_NFAT_Q6_M00302 TRANSFAC + 123342817 123342828 4.0E-06 CTTTGGAAAAAT 12 V_XFD3_01_M00269 TRANSFAC - 123346563 123346576 9.0E-06 TGAGGAAATAATAA 14 V_SP4_03_M02810 TRANSFAC + 123342342 123342358 1.0E-06 GTCCCCGCCCCCTCCAC 17 V_AML2_01_M01759 TRANSFAC + 123346547 123346554 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC + 123342345 123342358 2.0E-06 CCCGCCCCCTCCAC 14 V_RSRFC4_Q2_M00407 TRANSFAC + 123346346 123346362 4.0E-06 AAACTGAAAATAGAATC 17 V_IRF3_Q3_M01279 TRANSFAC - 123342560 123342572 4.0E-06 TTATTTTTGCTTG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 123342349 123342362 1.0E-05 TGGGGTGGAGGGGG 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 123342736 123342746 1.0E-06 TGTTTGCTTTT 11 V_IRF_Q6_M00772 TRANSFAC - 123346345 123346359 0.0E+00 TCTATTTTCAGTTTC 15 V_BCL6_Q3_M01171 TRANSFAC - 123346340 123346349 1.0E-06 GTTTCTAGGT 10 V_MEF2_03_M00232 TRANSFAC + 123346342 123346363 1.0E-06 CTAGAAACTGAAAATAGAATCA 22 V_MATH1_Q2_M01716 TRANSFAC - 123346498 123346507 6.0E-06 ACAGCTGGTG 10 V_TATA_C_M00216 TRANSFAC - 123346704 123346713 2.0E-06 CCTATAAAAA 10 V_YY1_Q6_02_M01035 TRANSFAC + 123342410 123342420 7.0E-06 GCCGCCATCTT 11 V_YY1_Q6_02_M01035 TRANSFAC + 123342590 123342600 2.0E-06 GCTGCCATTTT 11 V_CREBATF_Q6_M00981 TRANSFAC - 123346486 123346494 9.0E-06 GTGACGTCA 9 V_REX1_03_M01744 TRANSFAC - 123342409 123342420 1.0E-06 AAGATGGCGGCG 12 V_REX1_03_M01744 TRANSFAC - 123342589 123342600 3.0E-06 AAAATGGCAGCC 12 V_SP1SP3_Q4_M01219 TRANSFAC + 123342346 123342356 1.0E-06 CCGCCCCCTCC 11 V_AP4_Q5_M00175 TRANSFAC - 123346499 123346508 8.0E-06 AACAGCTGGT 10 V_SOX12_04_M02900 TRANSFAC + 123346363 123346378 1.0E-06 AATTGCACAAAGGAAA 16 V_ZBRK1_01_M01105 TRANSFAC + 123342848 123342862 3.0E-06 GGCAAACAGTAATTT 15 V_MEF2_04_M00233 TRANSFAC + 123346342 123346363 8.0E-06 CTAGAAACTGAAAATAGAATCA 22 V_MEF2_04_M00233 TRANSFAC - 123346698 123346719 3.0E-06 ATTGATCCTATAAAAAGTTATT 22 V_CREB_Q2_01_M00916 TRANSFAC - 123346482 123346495 4.0E-06 AGTGACGTCACCTC 14 V_CREB_Q2_01_M00916 TRANSFAC + 123346484 123346497 3.0E-06 GGTGACGTCACTAC 14 V_SP1_01_M00008 TRANSFAC + 123342446 123342455 7.0E-06 GAGGCGGGGT 10 V_ICSBP_Q6_M00699 TRANSFAC - 123346413 123346424 4.0E-06 AACATGAAACCA 12 V_GATA4_Q3_M00632 TRANSFAC + 123342565 123342576 9.0E-06 AAAAATAAGAGA 12 V_ZNF515_01_M01231 TRANSFAC - 123342307 123342316 1.0E-05 GCGGGGGGTA 10 V_SP4_Q5_M01273 TRANSFAC + 123342343 123342353 9.0E-06 TCCCCGCCCCC 11 V_CREM_Q6_M01820 TRANSFAC - 123346483 123346493 8.0E-06 TGACGTCACCT 11 V_CREM_Q6_M01820 TRANSFAC + 123346486 123346496 1.0E-06 TGACGTCACTA 11 V_YY1_03_M02044 TRANSFAC + 123342410 123342421 3.0E-06 GCCGCCATCTTT 12 V_VJUN_01_M00036 TRANSFAC + 123342222 123342237 9.0E-06 ACGGTGACGTCCTCTT 16 V_VJUN_01_M00036 TRANSFAC + 123346482 123346497 2.0E-06 GAGGTGACGTCACTAC 16 V_VJUN_01_M00036 TRANSFAC - 123346482 123346497 2.0E-06 GTAGTGACGTCACCTC 16 V_POU6F1_02_M01462 TRANSFAC - 123346263 123346279 6.0E-06 AATCATAATGAGAGATC 17 V_CREBP1_Q2_M00179 TRANSFAC - 123346484 123346495 2.0E-06 AGTGACGTCACC 12 V_AP4_01_M00005 TRANSFAC - 123342197 123342214 8.0E-06 ACGCTCAGCGGCTGCAGG 18 V_DR1_Q3_M00762 TRANSFAC - 123346434 123346446 8.0E-06 AGGACAAAGGCCT 13 V_OCT1_Q6_M00195 TRANSFAC - 123342856 123342870 6.0E-06 AAGTCTGCAAATTAC 15 V_ATF1_03_M02738 TRANSFAC + 123346482 123346497 4.0E-06 GAGGTGACGTCACTAC 16 V_ATF1_03_M02738 TRANSFAC - 123346482 123346497 5.0E-06 GTAGTGACGTCACCTC 16 V_ESRRA_04_M02852 TRANSFAC - 123342751 123342767 9.0E-06 GTTTTGGGGTCATTATT 17 V_TCF1_06_M02815 TRANSFAC + 123342792 123342808 9.0E-06 ACTCAGATAACTGAGTG 17 V_BDP1_01_M01796 TRANSFAC + 123341696 123341707 6.0E-06 GGATTTGAATCC 12 V_OSR2_03_M02785 TRANSFAC - 123346399 123346414 5.0E-06 CACTACAGTAGCAGGA 16 V_REST_02_M02256 TRANSFAC - 123341718 123341738 7.0E-06 TTAAGAACCTTGGCTAGAGTT 21 V_RSRFC4_01_M00026 TRANSFAC - 123346346 123346361 6.0E-06 ATTCTATTTTCAGTTT 16 V_ESRRA_03_M02748 TRANSFAC + 123346575 123346591 2.0E-06 CAGACAAGGTCATATCA 17 V_ETS1_B_M00339 TRANSFAC + 123346600 123346614 1.0E-05 GGAGGAAGTAGCTTG 15 V_CEBPB_Q6_M01896 TRANSFAC - 123346363 123346372 4.0E-06 TTGTGCAATT 10 V_IRF1_Q6_01_M01881 TRANSFAC - 123346344 123346357 0.0E+00 TATTTTCAGTTTCT 14 V_SOX8_03_M02808 TRANSFAC - 123346709 123346725 6.0E-06 GTATATATTGATCCTAT 17 V_HFH3_01_M00289 TRANSFAC + 123342733 123342745 9.0E-06 TCGTGTTTGCTTT 13 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 123342399 123342406 1.0E-05 TGTGGTTT 8 V_SATB1_01_M01232 TRANSFAC - 123345623 123345634 1.0E-05 TCTTAGTACTAA 12 V_MEF2_01_M00006 TRANSFAC + 123346691 123346706 7.0E-06 CAGCAAAAATAACTTT 16 V_HOXD3_01_M01338 TRANSFAC - 123342749 123342764 8.0E-06 TTGGGGTCATTATTCT 16 V_SP1_Q2_01_M00933 TRANSFAC + 123342344 123342353 4.0E-06 CCCCGCCCCC 10 V_CMAF_01_M01070 TRANSFAC + 123342857 123342875 2.0E-06 TAATTTGCAGACTTAGTTT 19 V_SP1_Q4_01_M00932 TRANSFAC - 123342342 123342354 2.0E-06 AGGGGGCGGGGAC 13 V_EHF_07_M02849 TRANSFAC + 123342718 123342733 1.0E-05 TCAAAGTTCCTAACCT 16 V_SMAD1_01_M01590 TRANSFAC - 123346436 123346447 7.0E-06 CAGGACAAAGGC 12 V_PPARA_01_M00242 TRANSFAC - 123346434 123346453 1.0E-06 CAGAGACAGGACAAAGGCCT 20 V_NANOG_02_M01247 TRANSFAC + 123342568 123342587 8.0E-06 AATAAGAGACAAAAAAAGGC 20 V_TCF11_01_M00285 TRANSFAC - 123342747 123342759 6.0E-06 GTCATTATTCTAG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.