Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ASF1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55723 anti-silencing function 1B histone chaperone chr19 - 14246940 - 14252440 14247440 Transcription Factor Binding Sites   Download all TFBS in the ASF1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYBL2_MYB_DBD_dimeric_16_1 SELEX + 14248098 14248113 9.0E-06 TCCGTTGTGAACGTTG 16 SPIC_ETS_full_monomeric_14_1 SELEX - 14250916 14250929 3.0E-06 GACAAGAGGAAGAA 14 SOX21_HMG_DBD_dimeric_13_2 SELEX + 14250764 14250776 2.0E-06 TGAATGATCTTCA 13 SOX21_HMG_DBD_dimeric_13_2 SELEX - 14250764 14250776 6.0E-06 TGAAGATCATTCA 13 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 14250882 14250899 1.0E-06 AGAGGTCAGCTGAGGCCA 18 SRY_HMG_DBD_dimeric_13_2 SELEX - 14250764 14250776 1.0E-06 TGAAGATCATTCA 13 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 14248066 14248078 8.0E-06 CAAGGGTCAGGAG 13 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 14250882 14250898 2.0E-06 GAGGTCAGCTGAGGCCA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 14250882 14250899 0.0E+00 AGAGGTCAGCTGAGGCCA 18 NFYA_MA0060.1 JASPAR + 14247532 14247547 6.0E-06 TCGGACCAATCAGCGG 16 SOX15_HMG_full_dimeric_15_3 SELEX - 14250763 14250777 3.0E-06 GTGAAGATCATTCAG 15 SPIB_ETS_DBD_monomeric_14_1 SELEX + 14247951 14247964 4.0E-06 GAGAAGCGGAAGTC 14 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 14246943 14246961 9.0E-06 GCAGTGGGGGAGGAGGTCA 19 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 14246955 14246972 1.0E-05 GAGGTCACGGGGAGGTCC 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 14246955 14246972 8.0E-06 GAGGTCACGGGGAGGTCC 18 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 14250882 14250898 1.0E-06 GAGGTCAGCTGAGGCCA 17 MEF2A_MA0052.1 JASPAR + 14251120 14251129 4.0E-06 CTATTTAAAG 10 SOX2_HMG_full_dimeric_15_1 SELEX - 14250763 14250777 5.0E-06 GTGAAGATCATTCAG 15 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 14246956 14246972 4.0E-06 AGGTCACGGGGAGGTCC 17 SRY_MA0084.1 JASPAR + 14249708 14249716 1.0E-06 TTAAACAAT 9 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 14246956 14246972 4.0E-06 AGGTCACGGGGAGGTCC 17 NFATC1_NFAT_full_dimeric_20_1 SELEX - 14248338 14248357 1.0E-05 ACTGGAACTCCCATTTTCAG 20 SOX14_HMG_DBD_dimeric_15_1 SELEX - 14250763 14250777 2.0E-06 GTGAAGATCATTCAG 15 MYBL1_MYB_DBD_dimeric_17_1 SELEX + 14248097 14248113 6.0E-06 GTCCGTTGTGAACGTTG 17 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 14250882 14250898 2.0E-06 GAGGTCAGCTGAGGCCA 17 Foxd3_MA0041.1 JASPAR + 14249730 14249741 7.0E-06 GATTTTTTTTTT 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 14251023 14251030 1.0E-05 ACATTCCA 8 ELK1_MA0028.1 JASPAR + 14247197 14247206 5.0E-06 GAACCGGAAG 10 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 14246953 14246972 6.0E-06 AGGAGGTCACGGGGAGGTCC 20 SPI1_ETS_full_monomeric_14_1 SELEX + 14247951 14247964 5.0E-06 GAGAAGCGGAAGTC 14 IRF3_IRF_full_trimeric_21_1 SELEX - 14249686 14249706 0.0E+00 AAGAAAAGGAAAAGGAAAACA 21 ELF5_MA0136.1 JASPAR + 14245003 14245011 4.0E-06 TACTTCCTT 9 Sox1_HMG_DBD_dimeric_15_2 SELEX - 14250763 14250777 4.0E-06 GTGAAGATCATTCAG 15 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 14247886 14247895 9.0E-06 CCAATAAACT 10 V_CEBPG_Q6_M00622 TRANSFAC - 14249737 14249749 4.0E-06 TCTATTAAAAAAA 13 V_AP2ALPHA_Q6_M01857 TRANSFAC + 14248513 14248523 6.0E-06 CGCCCCCGGCC 11 V_SPI1_01_M01203 TRANSFAC + 14247951 14247967 1.0E-05 GAGAAGCGGAAGTCGAG 17 V_STAT3_01_M00225 TRANSFAC - 14247732 14247752 7.0E-06 ATGCATCTCCCGGAAAAGCGA 21 V_DBX1_01_M01483 TRANSFAC + 14245027 14245043 3.0E-06 TTTTAAATTAAATCTTA 17 V_DBX1_01_M01483 TRANSFAC - 14249732 14249748 9.0E-06 CTATTAAAAAAAAAAAA 17 V_NFY_Q6_M00185 TRANSFAC + 14247447 14247457 6.0E-06 TGGCCAATCAC 11 V_STAT3STAT3_Q3_M01220 TRANSFAC + 14247737 14247750 6.0E-06 TTTCCGGGAGATGC 14 V_EVI1_04_M00081 TRANSFAC - 14249733 14249747 8.0E-06 TATTAAAAAAAAAAA 15 V_FOXD3_01_M00130 TRANSFAC + 14249730 14249741 8.0E-06 GATTTTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC + 14245027 14245042 8.0E-06 TTTTAAATTAAATCTT 16 V_AML3_Q6_M01856 TRANSFAC - 14251072 14251079 1.0E-05 AACCACAA 8 V_GATA3_03_M00351 TRANSFAC - 14250846 14250855 0.0E+00 AAAGATCTTA 10 V_ESE1_01_M01977 TRANSFAC - 14250702 14250711 8.0E-06 CACGGAAATA 10 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 14247882 14247895 2.0E-06 TGAGAGTTTATTGG 14 V_IRF2_Q6_M01882 TRANSFAC - 14249691 14249706 6.0E-06 AAGAAAAGGAAAAGGA 16 V_MAF_Q6_M00648 TRANSFAC - 14248477 14248492 3.0E-06 TGGAGAGAAGTTTCCG 16 V_LHX3_01_M01471 TRANSFAC + 14245026 14245042 7.0E-06 CTTTTAAATTAAATCTT 17 V_PRX2_Q2_M02115 TRANSFAC + 14245029 14245037 2.0E-06 TTAAATTAA 9 V_NFY_Q6_01_M00775 TRANSFAC + 14247444 14247456 9.0E-06 CTCTGGCCAATCA 13 V_TCFAP2E_04_M02926 TRANSFAC - 14249730 14249743 9.0E-06 AAAAAAAAAAAATC 14 V_TCFAP2E_04_M02926 TRANSFAC - 14249731 14249744 1.0E-06 TAAAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 14249732 14249745 1.0E-06 TTAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 14249733 14249746 8.0E-06 ATTAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 14249734 14249747 1.0E-06 TATTAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 14249735 14249748 2.0E-06 CTATTAAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC + 14251121 14251130 9.0E-06 TATTTAAAGT 10 V_PAX_Q6_M00808 TRANSFAC - 14248346 14248356 5.0E-06 CTGGAACTCCC 11 V_NFY_C_M00209 TRANSFAC - 14247445 14247458 3.0E-06 GGTGATTGGCCAGA 14 V_NFY_C_M00209 TRANSFAC + 14247838 14247851 3.0E-06 AGTGATTGGCAGGA 14 V_ELF4_04_M02850 TRANSFAC + 14245027 14245043 8.0E-06 TTTTAAATTAAATCTTA 17 V_ELF4_04_M02850 TRANSFAC - 14249729 14249745 0.0E+00 TTAAAAAAAAAAAATCC 17 V_ELF4_04_M02850 TRANSFAC - 14249730 14249746 0.0E+00 ATTAAAAAAAAAAAATC 17 V_ELF4_04_M02850 TRANSFAC - 14249731 14249747 0.0E+00 TATTAAAAAAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC - 14249732 14249748 7.0E-06 CTATTAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 14249733 14249749 2.0E-06 TCTATTAAAAAAAAAAA 17 V_ETV7_01_M02071 TRANSFAC - 14247735 14247744 7.0E-06 CCCGGAAAAG 10 V_HELIOSA_02_M01004 TRANSFAC - 14249687 14249697 2.0E-06 AAAAGGAAAAC 11 V_HELIOSA_02_M01004 TRANSFAC - 14249693 14249703 6.0E-06 AAAAGGAAAAG 11 V_LMX1_01_M01409 TRANSFAC - 14245025 14245041 1.0E-06 AGATTTAATTTAAAAGC 17 V_LMX1_01_M01409 TRANSFAC + 14245026 14245042 5.0E-06 CTTTTAAATTAAATCTT 17 V_ZFP105_03_M02827 TRANSFAC - 14249729 14249743 7.0E-06 AAAAAAAAAAAATCC 15 V_ZFP105_03_M02827 TRANSFAC - 14249730 14249744 6.0E-06 TAAAAAAAAAAAATC 15 V_ZFP105_03_M02827 TRANSFAC - 14249731 14249745 1.0E-06 TTAAAAAAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 14249732 14249746 0.0E+00 ATTAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 14249733 14249747 1.0E-06 TATTAAAAAAAAAAA 15 V_HOXB13_01_M01467 TRANSFAC - 14247883 14247898 6.0E-06 CAGCCAATAAACTCTC 16 V_NFAT_Q6_M00302 TRANSFAC - 14249686 14249697 1.0E-05 AAAAGGAAAACA 12 V_SPDEF_03_M02811 TRANSFAC + 14248470 14248485 0.0E+00 ATACATCCGGAAACTT 16 V_AML2_01_M01759 TRANSFAC - 14251072 14251079 1.0E-05 AACCACAA 8 V_ZBP89_Q4_M01816 TRANSFAC - 14246947 14246956 2.0E-06 TCCTCCCCCA 10 V_CEBPB_02_M00117 TRANSFAC - 14249948 14249961 9.0E-06 AGATTGCGCCACTG 14 V_IRF3_Q3_M01279 TRANSFAC + 14249690 14249702 2.0E-06 TTCCTTTTCCTTT 13 V_IRF_Q6_M00772 TRANSFAC + 14249684 14249698 7.0E-06 TATGTTTTCCTTTTC 15 V_IRF_Q6_M00772 TRANSFAC + 14249690 14249704 5.0E-06 TTCCTTTTCCTTTTC 15 V_MEF2_03_M00232 TRANSFAC - 14251115 14251136 6.0E-06 AGTGCTACTTTAAATAGGGTAC 22 V_MEF2_04_M00233 TRANSFAC - 14251115 14251136 9.0E-06 AGTGCTACTTTAAATAGGGTAC 22 V_ERALPHA_01_M01801 TRANSFAC - 14249963 14249977 2.0E-06 AGGTTGCAGTGAGCT 15 V_PBX1_05_M01967 TRANSFAC + 14247838 14247851 2.0E-06 AGTGATTGGCAGGA 14 V_CDC5_01_M00478 TRANSFAC - 14245029 14245040 1.0E-06 GATTTAATTTAA 12 V_NCX_02_M01420 TRANSFAC + 14245027 14245043 4.0E-06 TTTTAAATTAAATCTTA 17 V_ARID3A_04_M02735 TRANSFAC + 14245026 14245042 6.0E-06 CTTTTAAATTAAATCTT 17 V_SMAD4_Q6_M00733 TRANSFAC - 14250757 14250771 3.0E-06 ATCATTCAGCCAGCT 15 V_LIM1_01_M01418 TRANSFAC - 14245025 14245041 6.0E-06 AGATTTAATTTAAAAGC 17 V_ELF1_Q6_M00746 TRANSFAC - 14250917 14250928 5.0E-06 ACAAGAGGAAGA 12 V_EHF_03_M02052 TRANSFAC - 14250702 14250711 9.0E-06 CACGGAAATA 10 V_HOXA7_02_M01336 TRANSFAC - 14245025 14245041 3.0E-06 AGATTTAATTTAAAAGC 17 V_CAAT_01_M00254 TRANSFAC + 14247445 14247456 2.0E-06 TCTGGCCAATCA 12 V_MTF1_06_M02882 TRANSFAC - 14249730 14249743 2.0E-06 AAAAAAAAAAAATC 14 V_MTF1_06_M02882 TRANSFAC - 14249733 14249746 9.0E-06 ATTAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 14249734 14249747 1.0E-06 TATTAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 14249735 14249748 6.0E-06 CTATTAAAAAAAAA 14 V_NFYC_Q5_M02107 TRANSFAC + 14247447 14247460 3.0E-06 TGGCCAATCACCGC 14 V_TAL1_01_M01591 TRANSFAC + 14249695 14249707 2.0E-06 TTTCCTTTTCTTT 13 V_PLAG1_01_M01778 TRANSFAC + 14247206 14247221 3.0E-06 GGGGCTGTGGAAAGGG 16 V_PARP_Q3_M01211 TRANSFAC - 14249629 14249638 3.0E-06 TAAGAAATAC 10 V_TCF7_04_M02921 TRANSFAC - 14249736 14249750 1.0E-06 CTCTATTAAAAAAAA 15 V_NFY_01_M00287 TRANSFAC + 14247532 14247547 5.0E-06 TCGGACCAATCAGCGG 16 V_LMX1B_01_M01363 TRANSFAC + 14245025 14245041 3.0E-06 GCTTTTAAATTAAATCT 17 V_LMX1B_01_M01363 TRANSFAC - 14245026 14245042 5.0E-06 AAGATTTAATTTAAAAG 17 V_FPM315_01_M01587 TRANSFAC + 14246948 14246959 6.0E-06 GGGGGAGGAGGT 12 V_ESE1_02_M02055 TRANSFAC - 14250702 14250711 7.0E-06 CACGGAAATA 10 V_T3RBETA_Q6_01_M02119 TRANSFAC - 14250881 14250897 5.0E-06 AGGTCAGCTGAGGCCAC 17 V_ZFP281_01_M01597 TRANSFAC + 14246947 14246957 9.0E-06 TGGGGGAGGAG 11 V_SRF_06_M02916 TRANSFAC - 14249696 14249712 6.0E-06 TTTAAAAAGAAAAGGAA 17 V_SRF_06_M02916 TRANSFAC - 14249697 14249713 2.0E-06 GTTTAAAAAGAAAAGGA 17 V_SRF_06_M02916 TRANSFAC - 14249727 14249743 8.0E-06 AAAAAAAAAAAATCCCA 17 V_SRF_06_M02916 TRANSFAC - 14249729 14249745 0.0E+00 TTAAAAAAAAAAAATCC 17 V_SRF_06_M02916 TRANSFAC - 14249730 14249746 0.0E+00 ATTAAAAAAAAAAAATC 17 V_SRF_06_M02916 TRANSFAC - 14249731 14249747 0.0E+00 TATTAAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC - 14249732 14249748 0.0E+00 CTATTAAAAAAAAAAAA 17 V_SOX18_04_M02905 TRANSFAC - 14245026 14245041 6.0E-06 AGATTTAATTTAAAAG 16 V_SATB1_01_M01232 TRANSFAC - 14249736 14249747 9.0E-06 TATTAAAAAAAA 12 V_MEF2_01_M00006 TRANSFAC + 14245026 14245041 9.0E-06 CTTTTAAATTAAATCT 16 V_ELF5_04_M02241 TRANSFAC + 14245003 14245011 4.0E-06 TACTTCCTT 9 V_LHX5_01_M01353 TRANSFAC + 14245026 14245042 7.0E-06 CTTTTAAATTAAATCTT 17 V_NFYA_Q5_M02106 TRANSFAC + 14247447 14247460 4.0E-06 TGGCCAATCACCGC 14 V_NFYA_Q5_M02106 TRANSFAC + 14247534 14247547 8.0E-06 GGACCAATCAGCGG 14 V_GLIS2_04_M02863 TRANSFAC - 14249736 14249749 1.0E-06 TCTATTAAAAAAAA 14 V_SMAD1_01_M01590 TRANSFAC - 14249698 14249709 5.0E-06 AAAAAGAAAAGG 12 V_PAX2_02_M00486 TRANSFAC - 14247885 14247893 2.0E-06 AATAAACTC 9 V_NANOG_02_M01247 TRANSFAC - 14249694 14249713 1.0E-06 GTTTAAAAAGAAAAGGAAAA 20 V_ESE1_Q3_M01214 TRANSFAC - 14250702 14250711 7.0E-06 CACGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.