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IPO9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55705 importin 9 chr1 + 201793287 - 201798787 201798287 Transcription Factor Binding Sites   Download all TFBS in the IPO9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 201797087 201797097 1.0E-06 TAGGTGTGATG 11 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 201796771 201796779 5.0E-06 CTTAATCCC 9 Sox1_HMG_DBD_dimeric_14_1 SELEX + 201798025 201798038 1.0E-06 TGAATATAAAGTCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 201798025 201798038 1.0E-06 TGACTTTATATTCA 14 SOX10_HMG_full_dimeric_14_1 SELEX + 201798025 201798038 1.0E-06 TGAATATAAAGTCA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX + 201794660 201794671 5.0E-06 TTGCATAATGAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 201794659 201794671 4.0E-06 CTTGCATAATGAA 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 201798119 201798130 8.0E-06 AGTTTTCACACA 12 CUX1_CUT_DBD_dimeric_17_1 SELEX + 201798951 201798967 5.0E-06 ATCAAAGCTTAATAGAT 17 SOX7_HMG_full_dimeric_17_2 SELEX + 201798044 201798060 9.0E-06 CATGAACTTTATTCCAA 17 SOX8_HMG_DBD_dimeric_14_1 SELEX + 201798025 201798038 0.0E+00 TGAATATAAAGTCA 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 201798823 201798836 4.0E-06 AAAAAATATTTCCC 14 Pax4_MA0068.1 JASPAR + 201797635 201797664 7.0E-06 AAAAATTTATACATTTTCAACAAATAGGAT 30 Pax4_MA0068.1 JASPAR - 201797919 201797948 8.0E-06 CACAAATAGCCCCTATTTTAAACCACATTC 30 Pax4_MA0068.1 JASPAR - 201798804 201798833 1.0E-05 AAATATTTCCCCGACCGCGCTACTTCCTCC 30 PITX1_homeodomain_full_monomeric_8_1 SELEX + 201796772 201796779 1.0E-05 TTAATCCC 8 EOMES_TBX_DBD_monomeric_13_1 SELEX + 201797087 201797099 7.0E-06 TAGGTGTGATGAC 13 REL_MA0101.1 JASPAR - 201798091 201798100 6.0E-06 GGGGCTTTCC 10 T_MA0009.1 JASPAR + 201797086 201797096 4.0E-06 ATAGGTGTGAT 11 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 201798542 201798557 8.0E-06 AATCCGCTGACCGCAG 16 SOX8_HMG_full_dimeric_13_1 SELEX + 201798045 201798057 7.0E-06 ATGAACTTTATTC 13 Sox17_HMG_DBD_dimeric_15_2 SELEX + 201797654 201797668 3.0E-06 ACAAATAGGATTCAT 15 ELF3_ETS_full_monomeric_13_1 SELEX + 201796198 201796210 8.0E-06 AACCCAGAAGTAA 13 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 201798394 201798401 7.0E-06 TTAATCCT 8 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 201798823 201798836 9.0E-06 GGGAAATATTTTTT 14 SOX9_HMG_full_dimeric_16_3 SELEX + 201798024 201798039 0.0E+00 ATGAATATAAAGTCAT 16 SOX9_HMG_full_dimeric_16_3 SELEX - 201798024 201798039 1.0E-05 ATGACTTTATATTCAT 16 YY2_C2H2_full_monomeric_11_1 SELEX - 201798335 201798345 4.0E-06 GCCGCCATCTT 11 PRDM4_C2H2_full_monomeric_13_1 SELEX - 201798733 201798745 4.0E-06 TTTCAAGTCTCCA 13 POU1F1_POU_DBD_monomeric_17_1 SELEX + 201794657 201794673 4.0E-06 GTCTTGCATAATGAAGA 17 TBX21_TBX_full_monomeric_10_1 SELEX + 201797087 201797096 5.0E-06 TAGGTGTGAT 10 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 201796772 201796779 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX - 201798394 201798402 2.0E-06 TTTAATCCT 9 POU3F1_POU_DBD_monomeric_12_2 SELEX + 201794660 201794671 3.0E-06 TTGCATAATGAA 12 GSC_homeodomain_full_monomeric_10_1 SELEX + 201796771 201796780 4.0E-06 CTTAATCCCT 10 Myf_MA0055.1 JASPAR + 201798171 201798182 9.0E-06 AGGCAGCAGGAG 12 Myf_MA0055.1 JASPAR + 201798351 201798362 5.0E-06 CGGCAGCTGGTG 12 ELF1_ETS_full_monomeric_12_1 SELEX + 201796198 201796209 7.0E-06 AACCCAGAAGTA 12 GSC2_homeodomain_DBD_monomeric_10_1 SELEX + 201796771 201796780 7.0E-06 CTTAATCCCT 10 IRF3_IRF_full_trimeric_21_1 SELEX - 201796125 201796145 1.0E-06 GATAAATGGAGACAGAAACCA 21 V_TBX15_01_M01263 TRANSFAC + 201797088 201797106 1.0E-06 AGGTGTGATGACAGCACAC 19 V_POU3F3_01_M03090 TRANSFAC + 201794655 201794671 3.0E-06 GAGTCTTGCATAATGAA 17 V_HSF1_Q6_M01023 TRANSFAC - 201798654 201798670 6.0E-06 TCTCTCGGACTTTCACA 17 V_OBOX5_05_M03066 TRANSFAC - 201796767 201796783 1.0E-06 ATCAGGGATTAAGTCAT 17 V_BTEB3_Q5_M01865 TRANSFAC + 201798398 201798410 3.0E-06 TTAAAGGAAGCGT 13 V_CEBP_Q3_M00770 TRANSFAC - 201796390 201796401 1.0E-06 AAATTTAGCAAA 12 V_EVI1_04_M00081 TRANSFAC + 201798736 201798750 2.0E-06 AGACTTGAAAAGATA 15 V_SPDEF_04_M02915 TRANSFAC - 201797655 201797670 1.0E-05 GAATGAATCCTATTTG 16 V_RELBP52_01_M01239 TRANSFAC - 201798091 201798100 4.0E-06 GGGGCTTTCC 10 V_OCTAMER_01_M01324 TRANSFAC + 201794655 201794671 3.0E-06 GAGTCTTGCATAATGAA 17 V_TBR2_01_M01774 TRANSFAC + 201797088 201797096 6.0E-06 AGGTGTGAT 9 V_CEBP_01_M00159 TRANSFAC + 201796388 201796400 7.0E-06 ACTTTGCTAAATT 13 V_CEBP_01_M00159 TRANSFAC + 201796824 201796836 9.0E-06 GATTTGGTAACTC 13 V_ATF3_Q6_01_M01863 TRANSFAC - 201796766 201796776 2.0E-06 ATTAAGTCATC 11 V_YY1_Q6_M00793 TRANSFAC - 201798334 201798342 7.0E-06 GCCATCTTT 9 V_CMYB_Q5_M01821 TRANSFAC - 201798589 201798599 8.0E-06 TCCAACTGGCT 11 V_PU1_Q4_M01172 TRANSFAC + 201797156 201797174 6.0E-06 TCTTGCTTTTTCTTCTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 201797159 201797177 4.0E-06 TGCTTTTTCTTCTTTTTCT 19 V_AP4_Q6_01_M00927 TRANSFAC - 201798353 201798361 6.0E-06 ACCAGCTGC 9 V_HBP1_Q2_M01661 TRANSFAC + 201796071 201796079 4.0E-06 TTCAATAAA 9 V_CEBPB_01_M00109 TRANSFAC - 201796388 201796401 7.0E-06 AAATTTAGCAAAGT 14 V_MEF2A_Q6_M02024 TRANSFAC - 201797926 201797935 3.0E-06 TATTTTAAAC 10 V_ELF4_04_M02850 TRANSFAC - 201798824 201798840 7.0E-06 ACTCAAAAAATATTTCC 17 V_OBOX5_02_M01480 TRANSFAC - 201796767 201796783 1.0E-06 ATCAGGGATTAAGTCAT 17 V_TCF3_04_M02816 TRANSFAC - 201796739 201796755 3.0E-06 ATTACTTCAAAAGAAAG 17 V_MYF_01_M01302 TRANSFAC + 201798171 201798182 9.0E-06 AGGCAGCAGGAG 12 V_MYF_01_M01302 TRANSFAC + 201798351 201798362 5.0E-06 CGGCAGCTGGTG 12 V_FKLF_Q5_M01837 TRANSFAC + 201796251 201796260 2.0E-06 GGGGTGGGAG 10 V_GATA3_05_M02859 TRANSFAC + 201798958 201798979 0.0E+00 CTTAATAGATGTCATCAAACAA 22 V_GATA3_05_M02859 TRANSFAC - 201798959 201798980 2.0E-06 CTTGTTTGATGACATCTATTAA 22 V_POLY_C_M00212 TRANSFAC + 201796073 201796090 1.0E-06 CAATAAAGTTATCTCCTG 18 V_CREL_01_M00053 TRANSFAC - 201798091 201798100 6.0E-06 GGGGCTTTCC 10 Hand1_Tcfe2a_MA0092.1 JASPAR + 201796019 201796028 8.0E-06 CATCTGGCAT 10 V_ZBP89_Q4_M01816 TRANSFAC - 201798719 201798728 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC + 201796767 201796775 9.0E-06 ATGACTTAA 9 V_MAZ_Q6_01_M02023 TRANSFAC + 201798720 201798733 1.0E-05 GGGGGAGGGAGGGT 14 V_HOXC11_01_M01329 TRANSFAC + 201798031 201798046 7.0E-06 TAAAGTCATATATCAT 16 V_MATH1_Q2_M01716 TRANSFAC + 201798353 201798362 3.0E-06 GCAGCTGGTG 10 V_YY1_Q6_02_M01035 TRANSFAC - 201798335 201798345 7.0E-06 GCCGCCATCTT 11 V_IRF3_06_M02871 TRANSFAC + 201798148 201798161 0.0E+00 AGAGAAAGGTGCAG 14 V_OCT1_04_M00138 TRANSFAC + 201798016 201798038 6.0E-06 AAAGATGCATGAATATAAAGTCA 23 V_OCT1_04_M00138 TRANSFAC + 201798026 201798048 4.0E-06 GAATATAAAGTCATATATCATGA 23 V_REX1_03_M01744 TRANSFAC + 201798335 201798346 1.0E-06 AAGATGGCGGCG 12 V_PPARG_03_M00528 TRANSFAC - 201798046 201798062 4.0E-06 ATTTGGAATAAAGTTCA 17 V_ERR1_Q3_M01841 TRANSFAC + 201796813 201796827 5.0E-06 AAGTGACCTAGGATT 15 V_BBX_04_M02843 TRANSFAC + 201796780 201796796 7.0E-06 TGATTGTTACCAGTCCA 17 V_TCF7_03_M02817 TRANSFAC - 201796739 201796755 2.0E-06 ATTACTTCAAAAGAAAG 17 V_PNR_01_M01650 TRANSFAC + 201798032 201798045 3.0E-06 AAAGTCATATATCA 14 V_HOXA11_01_M01378 TRANSFAC + 201798031 201798046 8.0E-06 TAAAGTCATATATCAT 16 V_PPARA_02_M00518 TRANSFAC + 201798478 201798496 4.0E-06 TAAGGTGCTGGAGGTGACG 19 V_TBX5_01_M01019 TRANSFAC + 201797086 201797097 7.0E-06 ATAGGTGTGATG 12 V_EVI1_06_M00011 TRANSFAC - 201796141 201796149 2.0E-06 ACAAGATAA 9 V_SOX17_04_M02904 TRANSFAC - 201798019 201798035 6.0E-06 CTTTATATTCATGCATC 17 V_GR_Q6_02_M01836 TRANSFAC - 201798467 201798479 3.0E-06 TAATCTGTTCTTC 13 V_OTX2_Q3_M01719 TRANSFAC - 201796770 201796782 9.0E-06 TCAGGGATTAAGT 13 V_OTX2_Q3_M01719 TRANSFAC + 201798391 201798403 3.0E-06 ACAAGGATTAAAG 13 V_ELF1_Q6_M00746 TRANSFAC + 201798801 201798812 8.0E-06 GTTGGAGGAAGT 12 V_GCNF_01_M00526 TRANSFAC + 201796446 201796463 6.0E-06 ATCAAGTTCAACTTCTTT 18 V_ZFP105_04_M02931 TRANSFAC + 201796067 201796083 0.0E+00 GCGTTTCAATAAAGTTA 17 V_YY1_03_M02044 TRANSFAC - 201798334 201798345 3.0E-06 GCCGCCATCTTT 12 V_CIZ_01_M00734 TRANSFAC - 201798829 201798837 6.0E-06 CAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC - 201797160 201797173 2.0E-06 AAAGAAGAAAAAGC 14 V_NFYC_Q5_M02107 TRANSFAC - 201798259 201798272 1.0E-05 CGGCCAATCCGCGA 14 V_ZFP206_01_M01742 TRANSFAC + 201798244 201798254 1.0E-06 TGCGCAGGCGC 11 V_DOBOX5_01_M01463 TRANSFAC - 201796767 201796783 1.0E-06 ATCAGGGATTAAGTCAT 17 V_OTX2_01_M01387 TRANSFAC - 201796767 201796783 8.0E-06 ATCAGGGATTAAGTCAT 17 V_ZFP281_01_M01597 TRANSFAC + 201798719 201798729 9.0E-06 TGGGGGAGGGA 11 V_MEF3_B_M00319 TRANSFAC + 201798114 201798126 5.0E-06 GGCTCAGTTTTCA 13 V_TBX5_Q5_M01044 TRANSFAC - 201797087 201797096 7.0E-06 ATCACACCTA 10 V_SOX12_03_M02796 TRANSFAC - 201797647 201797660 7.0E-06 TATTTGTTGAAAAT 14 V_PIT1_Q6_M00802 TRANSFAC - 201796881 201796898 7.0E-06 CCTTCAAAATGGTTCCCA 18 V_PIT1_Q6_M00802 TRANSFAC + 201798019 201798036 4.0E-06 GATGCATGAATATAAAGT 18 V_MEF2_01_M00006 TRANSFAC - 201798824 201798839 7.0E-06 CTCAAAAAATATTTCC 16 V_CEBP_Q2_01_M00912 TRANSFAC + 201796390 201796401 6.0E-06 TTTGCTAAATTT 12 V_HNF4_01_M00134 TRANSFAC - 201798043 201798061 3.0E-06 TTTGGAATAAAGTTCATGA 19 V_LPOLYA_B_M00318 TRANSFAC + 201796073 201796080 7.0E-06 CAATAAAG 8 V_GATA6_04_M02757 TRANSFAC + 201796863 201796879 5.0E-06 TCACTTGATAAGGGTTC 17 V_HOXD10_01_M01375 TRANSFAC + 201796069 201796085 6.0E-06 GTTTCAATAAAGTTATC 17 V_OBOX5_01_M01381 TRANSFAC - 201796767 201796783 2.0E-06 ATCAGGGATTAAGTCAT 17 V_OBOX5_01_M01381 TRANSFAC + 201798390 201798406 1.0E-05 CACAAGGATTAAAGGAA 17 V_OTX1_01_M01366 TRANSFAC - 201796767 201796783 3.0E-06 ATCAGGGATTAAGTCAT 17 V_OBOX6_06_M03067 TRANSFAC + 201796767 201796783 2.0E-06 ATGACTTAATCCCTGAT 17 V_OBOX6_06_M03067 TRANSFAC - 201798390 201798406 1.0E-05 TTCCTTTAATCCTTGTG 17 V_PAX4_04_M00380 TRANSFAC - 201797918 201797947 1.0E-06 ACAAATAGCCCCTATTTTAAACCACATTCT 30 V_CEBPA_Q6_M01866 TRANSFAC - 201796389 201796401 4.0E-06 AAATTTAGCAAAG 13 V_NKX21_01_M01312 TRANSFAC + 201796377 201796392 3.0E-06 CCACCCTCTTGACTTT 16 V_OCT4_01_M01125 TRANSFAC - 201796063 201796077 3.0E-06 TATTGAAACGCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.