Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PRKACB Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5567 protein kinase, cAMP-dependent, catalytic, beta chr1 + 84538744 - 84544244 84543744 Transcription Factor Binding Sites   Download all TFBS in the PRKACB promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 84543736 84543747 7.0E-06 GACACTCCCCCT 12 GABPA_MA0062.2 JASPAR - 84543633 84543643 1.0E-06 CCGGAAGTGAC 11 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 84543192 84543206 5.0E-06 AACGAAAAGCTCGAA 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 84543737 84543747 1.0E-05 GACACTCCCCC 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 84544695 84544705 1.0E-06 CTTAAAGGTCA 11 SRF_MADS_DBD_dimeric_12_1 SELEX + 84544347 84544358 4.0E-06 CCCAAATATGGT 12 SRF_MADS_DBD_dimeric_12_1 SELEX - 84544347 84544358 2.0E-06 ACCATATTTGGG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 84539199 84539214 2.0E-06 AATTTCCATGGAAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 84539199 84539214 8.0E-06 GGTTTCCATGGAAATT 16 SRF_MA0083.1 JASPAR + 84544346 84544357 9.0E-06 CCCCAAATATGG 12 SRF_MA0083.1 JASPAR - 84544348 84544359 1.0E-06 GACCATATTTGG 12 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 84543982 84543999 7.0E-06 GATGGCAAGAAGGGGTCA 18 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 84544699 84544716 5.0E-06 AAGGTCATTCGGAGTTGA 18 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 84539199 84539214 3.0E-06 GGTTTCCATGGAAATT 16 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 84544699 84544716 8.0E-06 AAGGTCATTCGGAGTTGA 18 NFATC1_NFAT_full_dimeric_14_1 SELEX + 84539200 84539213 0.0E+00 ATTTCCATGGAAAC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 84539200 84539213 0.0E+00 GTTTCCATGGAAAT 14 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 84544690 84544705 1.0E-06 TAAAACTTAAAGGTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 84544690 84544705 1.0E-06 TGACCTTTAAGTTTTA 16 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 84543110 84543121 1.0E-05 AAACATCATAGG 12 RFX2_RFX_DBD_dimeric_16_1 SELEX + 84539199 84539214 4.0E-06 AATTTCCATGGAAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 84539199 84539214 3.0E-06 GGTTTCCATGGAAATT 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 84539119 84539135 0.0E+00 ACATAGCTTACATTCCA 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 84539199 84539214 4.0E-06 AATTTCCATGGAAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 84539199 84539214 6.0E-06 GGTTTCCATGGAAATT 16 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 84539128 84539135 1.0E-05 ACATTCCA 8 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 84544696 84544706 4.0E-06 TTAAAGGTCAT 11 SRF_MADS_full_dimeric_16_1 SELEX + 84544345 84544360 2.0E-06 TCCCCAAATATGGTCC 16 SRF_MADS_full_dimeric_16_1 SELEX - 84544345 84544360 2.0E-06 GGACCATATTTGGGGA 16 Myf_MA0055.1 JASPAR - 84543805 84543816 8.0E-06 CGGCAGCAGCAG 12 TEAD1_TEA_full_dimeric_17_1 SELEX + 84539119 84539135 0.0E+00 ACATAGCTTACATTCCA 17 GABPA_ETS_full_monomeric_10_1 SELEX - 84543635 84543644 9.0E-06 GCCGGAAGTG 10 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 84539091 84539108 8.0E-06 AGTGATGACAAAATCAAA 18 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 84543701 84543712 8.0E-06 CGCCCCCGGGCA 12 RORA_1_MA0071.1 JASPAR + 84544696 84544705 7.0E-06 TTAAAGGTCA 10 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 84543701 84543712 8.0E-06 CGCCCCCGGGCA 12 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 84543574 84543584 1.0E-05 CGCCCCAGGCT 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 84539098 84539111 7.0E-06 ACAAAATCAAAATT 14 TEAD1_MA0090.1 JASPAR + 84539127 84539138 1.0E-06 TACATTCCAGTG 12 V_SRF_Q6_M00186 TRANSFAC - 84544346 84544359 8.0E-06 GACCATATTTGGGG 14 RXR_RAR_DR5_MA0159.1 JASPAR + 84544700 84544716 5.0E-06 AGGTCATTCGGAGTTGA 17 V_FLI1_Q6_M01208 TRANSFAC - 84543633 84543643 1.0E-06 CCGGAAGTGAC 11 V_SREBP2_Q6_M01177 TRANSFAC + 84543557 84543568 8.0E-06 ACGCCACCTCAG 12 V_ZFX_01_M01593 TRANSFAC - 84543673 84543688 6.0E-06 GGCCAGGCCCTGGCCC 16 V_RORA1_01_M00156 TRANSFAC + 84544694 84544706 4.0E-06 ACTTAAAGGTCAT 13 V_ERR3_Q2_01_M02094 TRANSFAC + 84544695 84544707 5.0E-06 CTTAAAGGTCATT 13 V_SATB1_Q3_M01723 TRANSFAC + 84544692 84544707 4.0E-06 AAACTTAAAGGTCATT 16 V_AR_Q6_01_M01996 TRANSFAC + 84539218 84539232 3.0E-06 GCTCAAGCTGTTCTT 15 V_NR2F2_03_M02783 TRANSFAC + 84544694 84544709 1.0E-06 ACTTAAAGGTCATTCG 16 V_P50P50_Q3_M01223 TRANSFAC - 84544290 84544302 7.0E-06 AAGGGAATCCCAG 13 V_AP2_Q6_01_M00915 TRANSFAC + 84543572 84543584 6.0E-06 CCCGCCCCAGGCT 13 V_SP1_02_M01303 TRANSFAC - 84543569 84543579 8.0E-06 GGGGCGGGGGC 11 V_NFAT2_01_M01748 TRANSFAC - 84539199 84539207 5.0E-06 ATGGAAATT 9 V_SRF_C_M00215 TRANSFAC - 84544344 84544358 5.0E-06 ACCATATTTGGGGAA 15 V_MYF_01_M01302 TRANSFAC - 84543805 84543816 8.0E-06 CGGCAGCAGCAG 12 V_ER81_02_M02065 TRANSFAC - 84543635 84543644 1.0E-05 GCCGGAAGTG 10 V_AP2BETA_Q3_M01858 TRANSFAC - 84543561 84543576 3.0E-06 GCGGGGGCCTGAGGTG 16 V_AP2BETA_Q3_M01858 TRANSFAC + 84543696 84543711 5.0E-06 GCGGCTGCCCGGGGGC 16 V_GADP_01_M01258 TRANSFAC + 84543635 84543646 0.0E+00 CACTTCCGGCGC 12 V_ERR1_Q3_M01841 TRANSFAC - 84544694 84544708 1.0E-06 GAATGACCTTTAAGT 15 V_GRE_C_M00205 TRANSFAC + 84539217 84539232 1.0E-06 TGCTCAAGCTGTTCTT 16 V_DAX1_01_M01248 TRANSFAC + 84544692 84544711 4.0E-06 AAACTTAAAGGTCATTCGGA 20 V_TEL2_Q6_M00678 TRANSFAC + 84543634 84543643 9.0E-06 TCACTTCCGG 10 V_TEF_01_M01305 TRANSFAC + 84539127 84539138 1.0E-06 TACATTCCAGTG 12 V_ELK1_02_M00025 TRANSFAC - 84543634 84543647 9.0E-06 CGCGCCGGAAGTGA 14 V_SRF_Q5_02_M01007 TRANSFAC + 84544343 84544361 1.0E-05 CTTCCCCAAATATGGTCCG 19 V_SP3_Q3_M00665 TRANSFAC - 84543571 84543584 5.0E-06 AGCCTGGGGCGGGG 14 V_HIC1_02_M01072 TRANSFAC + 84543695 84543709 2.0E-06 CGCGGCTGCCCGGGG 15 V_GR_Q6_02_M01836 TRANSFAC + 84539221 84539233 9.0E-06 CAAGCTGTTCTTA 13 V_ERR1_Q2_M00511 TRANSFAC + 84544694 84544707 0.0E+00 ACTTAAAGGTCATT 14 V_GATA3_01_M00077 TRANSFAC - 84543495 84543503 1.0E-05 GAGATAGTG 9 V_ZBTB12_03_M02824 TRANSFAC - 84544330 84544346 1.0E-05 GAAGTGTTCCAGAACGT 17 V_SRF_01_M00152 TRANSFAC + 84544344 84544361 4.0E-06 TTCCCCAAATATGGTCCG 18 V_NFAT2_02_M01749 TRANSFAC - 84539201 84539211 0.0E+00 TTCCATGGAAA 11 V_NFAT2_02_M01749 TRANSFAC + 84539202 84539212 0.0E+00 TTCCATGGAAA 11 V_ESRRA_03_M02748 TRANSFAC + 84544694 84544710 7.0E-06 ACTTAAAGGTCATTCGG 17 V_SRF_Q4_M00810 TRANSFAC + 84544347 84544364 4.0E-06 CCCAAATATGGTCCGAGG 18 V_RXR_RAR_01_M02272 TRANSFAC + 84544700 84544716 5.0E-06 AGGTCATTCGGAGTTGA 17 V_OCT1_07_M00248 TRANSFAC - 84539199 84539210 3.0E-06 TCCATGGAAATT 12 V_RARA_03_M02787 TRANSFAC + 84544694 84544709 3.0E-06 ACTTAAAGGTCATTCG 16 V_TBX22_01_M01195 TRANSFAC - 84539134 84539152 7.0E-06 AGTTGCGACTTTCCCACTG 19 V_VDR_Q3_M00444 TRANSFAC + 84543442 84543456 7.0E-06 GGGTGAGGAGGGACT 15 V_RNF96_01_M01199 TRANSFAC - 84544135 84544144 7.0E-06 GCCCGCGGCC 10 V_DEC_Q1_M00997 TRANSFAC - 84544462 84544474 2.0E-06 ACCCAAGTGATGG 13 V_CEBPG_Q6_01_M01869 TRANSFAC + 84539094 84539105 5.0E-06 GATGACAAAATC 12 V_PAX4_04_M00380 TRANSFAC - 84539176 84539205 7.0E-06 GGAAATTATCCCCAGGTCATACTAGACCCG 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.