Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NHP2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55651 NHP2 ribonucleoprotein chr5 -177580461 - 177585961 177580961

Transcription Factor Binding Sites

 
Download all TFBS in the NHP2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GMEB2_SAND_DBD_dimeric_8_2 SELEX + 177577138 177577145 7.0E-06 TTACGTAA 8
GMEB2_SAND_DBD_dimeric_8_2 SELEX - 177577138 177577145 7.0E-06 TTACGTAA 8
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 177577137 177577156 7.0E-06 GTTACGTAAGATAAGGACAG 20
Pax6_MA0069.1 JASPAR + 177580873 177580886 4.0E-06 TTTAGGCATCACTT 14
ZNF713_C2H2_full_monomeric_17_1 SELEX + 177576438 177576454 9.0E-06 AAGAAAACACCCACAGA 17
TEF_bZIP_DBD_dimeric_12_1 SELEX + 177577136 177577147 4.0E-06 TGTTACGTAAGA 12
TEF_bZIP_DBD_dimeric_12_1 SELEX - 177577136 177577147 2.0E-06 TCTTACGTAACA 12
HLF_bZIP_full_dimeric_12_1 SELEX + 177577136 177577147 8.0E-06 TGTTACGTAAGA 12
HLF_bZIP_full_dimeric_12_1 SELEX - 177577136 177577147 2.0E-06 TCTTACGTAACA 12
NFIL3_MA0025.1 JASPAR - 177577135 177577145 6.0E-06 TTACGTAACAG 11
NFIL3_MA0025.1 JASPAR + 177577138 177577148 4.0E-06 TTACGTAAGAT 11
NFYA_MA0060.1 JASPAR + 177580922 177580937 5.0E-06 CACGGCCAATCAGGAA 16
DBP_bZIP_full_dimeric_12_1 SELEX + 177577136 177577147 2.0E-06 TGTTACGTAAGA 12
DBP_bZIP_full_dimeric_12_1 SELEX - 177577136 177577147 3.0E-06 TCTTACGTAACA 12
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 177576424 177576433 2.0E-06 AGCAGCTGCT 10
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 177576424 177576433 2.0E-06 AGCAGCTGCT 10
Gata1_MA0035.2 JASPAR + 177577143 177577153 8.0E-06 TAAGATAAGGA 11
NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 177577136 177577147 1.0E-05 TGTTACGTAAGA 12
NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 177577136 177577147 3.0E-06 TCTTACGTAACA 12
VENTX_homeodomain_DBD_monomeric_9_1 SELEX + 177581056 177581064 5.0E-06 ACCGATTAG 9
Myf_MA0055.1 JASPAR + 177576420 177576431 9.0E-06 AACCAGCAGCTG 12
Myf_MA0055.1 JASPAR + 177576423 177576434 0.0E+00 CAGCAGCTGCTG 12
Myf_MA0055.1 JASPAR - 177576423 177576434 0.0E+00 CAGCAGCTGCTG 12
Myf_MA0055.1 JASPAR - 177576426 177576437 1.0E-06 AAGCAGCAGCTG 12
NHLH1_bHLH_full_dimeric_10_1 SELEX + 177576424 177576433 7.0E-06 AGCAGCTGCT 10
NHLH1_bHLH_full_dimeric_10_1 SELEX - 177576424 177576433 7.0E-06 AGCAGCTGCT 10
V_EVI1_04_M00081 TRANSFAC - 177581156 177581170 3.0E-06 AAAAAAGAAAAAAAA 15
V_IRF_Q6_01_M00972 TRANSFAC - 177581160 177581170 6.0E-06 AAAAAAGAAAA 11
V_IRF2_Q6_M01882 TRANSFAC - 177581157 177581172 5.0E-06 TCAAAAAAGAAAAAAA 16
V_GATA_C_M00203 TRANSFAC + 177577145 177577155 3.0E-06 AGATAAGGACA 11
V_SPZ1_01_M00446 TRANSFAC + 177581070 177581084 8.0E-06 AGCGGAGGGAATGTG 15
V_TCFAP2E_04_M02926 TRANSFAC - 177581155 177581168 7.0E-06 AAAAGAAAAAAAAC 14
V_TCFAP2E_04_M02926 TRANSFAC - 177581156 177581169 0.0E+00 AAAAAGAAAAAAAA 14
V_MYF_01_M01302 TRANSFAC + 177576420 177576431 9.0E-06 AACCAGCAGCTG 12
V_MYF_01_M01302 TRANSFAC + 177576423 177576434 0.0E+00 CAGCAGCTGCTG 12
V_MYF_01_M01302 TRANSFAC - 177576423 177576434 0.0E+00 CAGCAGCTGCTG 12
V_MYF_01_M01302 TRANSFAC - 177576426 177576437 1.0E-06 AAGCAGCAGCTG 12
V_ZFP105_03_M02827 TRANSFAC - 177581156 177581170 7.0E-06 AAAAAAGAAAAAAAA 15
V_E4BP4_01_M00045 TRANSFAC + 177577136 177577147 4.0E-06 TGTTACGTAAGA 12
V_E4BP4_01_M00045 TRANSFAC - 177577136 177577147 5.0E-06 TCTTACGTAACA 12
V_GMEB1_03_M02761 TRANSFAC - 177577133 177577149 2.0E-06 TATCTTACGTAACAGGG 17
V_GMEB1_03_M02761 TRANSFAC + 177577134 177577150 0.0E+00 CCTGTTACGTAAGATAA 17
V_CEBPB_02_M00117 TRANSFAC - 177581208 177581221 9.0E-06 AGATTGCGCCACTG 14
V_SP1_Q6_M00196 TRANSFAC + 177581089 177581101 6.0E-06 AAGGGGCGGAGCC 13
V_SP1_Q6_M00196 TRANSFAC + 177581119 177581131 4.0E-06 AGAGGGCGGGGCT 13
V_IRF_Q6_M00772 TRANSFAC + 177581156 177581170 2.0E-06 TTTTTTTTCTTTTTT 15
V_ASCL2_03_M02737 TRANSFAC - 177576420 177576436 1.0E-06 AGCAGCAGCTGCTGGTT 17
V_ASCL2_03_M02737 TRANSFAC + 177576421 177576437 0.0E+00 ACCAGCAGCTGCTGCTT 17
V_PAX6_Q2_M00979 TRANSFAC - 177580882 177580895 4.0E-06 ATGACCTGGAAGTG 14
V_OCT1_04_M00138 TRANSFAC - 177576464 177576486 7.0E-06 GAAAGTAAATGCTAAGACTAAAA 23
V_GATA1_09_M02254 TRANSFAC + 177577143 177577153 8.0E-06 TAAGATAAGGA 11
V_VBP_01_M00228 TRANSFAC + 177577137 177577146 3.0E-06 GTTACGTAAG 10
V_MTF1_06_M02882 TRANSFAC - 177581156 177581169 9.0E-06 AAAAAGAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 177581157 177581170 0.0E+00 AAAAAAGAAAAAAA 14
V_GATA1_04_M00128 TRANSFAC + 177577142 177577154 4.0E-06 GTAAGATAAGGAC 13
V_SP4_04_M02914 TRANSFAC + 177581017 177581031 5.0E-06 TTAAGGCGGGGCCAT 15
V_FOXJ3_06_M02855 TRANSFAC - 177580802 177580818 2.0E-06 ATGACCAAAATAAAGGC 17
V_NFY_01_M00287 TRANSFAC + 177580922 177580937 8.0E-06 CACGGCCAATCAGGAA 16
V_FOXO3_01_M00477 TRANSFAC - 177576437 177576450 9.0E-06 TGGGTGTTTTCTTA 14
V_T3RBETA_Q6_01_M02119 TRANSFAC + 177577140 177577156 3.0E-06 ACGTAAGATAAGGACAG 17
V_CREBP1_01_M00040 TRANSFAC + 177577138 177577145 7.0E-06 TTACGTAA 8
V_CREBP1_01_M00040 TRANSFAC - 177577138 177577145 7.0E-06 TTACGTAA 8
V_SRF_06_M02916 TRANSFAC - 177581152 177581168 9.0E-06 AAAAGAAAAAAAACGAG 17
V_SRF_06_M02916 TRANSFAC - 177581153 177581169 7.0E-06 AAAAAGAAAAAAAACGA 17
V_SRF_06_M02916 TRANSFAC - 177581155 177581171 3.0E-06 CAAAAAAGAAAAAAAAC 17
V_NFYA_Q5_M02106 TRANSFAC + 177580924 177580937 1.0E-06 CGGCCAATCAGGAA 14
V_SP1_Q4_01_M00932 TRANSFAC + 177581119 177581131 2.0E-06 AGAGGGCGGGGCT 13
V_SMAD1_01_M01590 TRANSFAC - 177581158 177581169 3.0E-06 AAAAAGAAAAAA 12
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL