Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PPP5C Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5536 protein phosphatase 5, catalytic subunit chr19 + 46845250 - 46850750 46850250 Transcription Factor Binding Sites   Download all TFBS in the PPP5C promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 46850763 46850781 0.0E+00 AGGCCTGTAGAGGGCGCTA 19 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 46849651 46849663 9.0E-06 AAAAACACAAACA 13 NF-kappaB_MA0061.1 JASPAR - 46855000 46855009 6.0E-06 GGGACTTCCC 10 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 46849873 46849891 8.0E-06 GAAGATTTGTTCAAGGTCA 19 Myc_MA0147.1 JASPAR - 46854072 46854081 4.0E-06 AGCACGTGGC 10 RFX4_RFX_DBD_dimeric_16_1 SELEX - 46850535 46850550 8.0E-06 CGTTGCTATGGTTCCG 16 FOXL1_forkhead_full_dimeric_13_1 SELEX - 46853973 46853985 7.0E-06 ATAAAACAAACAG 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 46854988 46855000 2.0E-06 CAAAAACAAACAA 13 Esrrb_MA0141.1 JASPAR + 46849880 46849891 0.0E+00 TGTTCAAGGTCA 12 Esrrb_MA0141.1 JASPAR + 46854022 46854033 4.0E-06 CGCCCAAGGTCA 12 TEAD1_TEA_full_monomeric_10_1 SELEX - 46850967 46850976 2.0E-06 CACATTCCTT 10 REL_MA0101.1 JASPAR - 46850019 46850028 3.0E-06 TGGGATTTCC 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 46850535 46850550 6.0E-06 CGGAACCATAGCAACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 46850535 46850550 9.0E-06 CGTTGCTATGGTTCCG 16 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 46849874 46849891 8.0E-06 AAGATTTGTTCAAGGTCA 18 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 46853974 46853984 9.0E-06 TAAAACAAACA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 46854989 46854999 1.0E-06 AAAAACAAACA 11 ELF3_ETS_full_monomeric_13_1 SELEX + 46850931 46850943 3.0E-06 AACAAGGAAGTAG 13 HOXA5_MA0158.1 JASPAR + 46849828 46849835 7.0E-06 CACTAATT 8 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 46854006 46854019 5.0E-06 AAGTGAAAAAACCA 14 RELA_MA0107.1 JASPAR - 46850019 46850028 7.0E-06 TGGGATTTCC 10 ESR1_MA0112.2 JASPAR + 46850165 46850184 3.0E-06 ACCTCTGGTCACCTTGTCCT 20 SP1_MA0079.2 JASPAR - 46855164 46855173 9.0E-06 CCCCTCCTCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 46854861 46854870 5.0E-06 AACAGCTGCC 10 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 46849883 46849892 3.0E-06 TCAAGGTCAC 10 CTCF_C2H2_full_monomeric_17_1 SELEX - 46850764 46850780 3.0E-06 AGCGCCCTCTACAGGCC 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 46853974 46853984 4.0E-06 TAAAACAAACA 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 46854989 46854999 1.0E-06 AAAAACAAACA 11 Mycn_MA0104.2 JASPAR - 46854072 46854081 2.0E-06 AGCACGTGGC 10 RFX5_RFX_DBD_dimeric_16_3 SELEX + 46850535 46850550 3.0E-06 CGGAACCATAGCAACG 16 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 46849882 46849892 1.0E-06 TTCAAGGTCAC 11 EHF_ETS_full_monomeric_12_1 SELEX + 46850931 46850942 6.0E-06 AACAAGGAAGTA 12 ELF5_ETS_full_monomeric_11_1 SELEX + 46850932 46850942 4.0E-06 ACAAGGAAGTA 11 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 46849883 46849893 1.0E-06 TCAAGGTCACA 11 ELF3_ETS_DBD_monomeric_12_1 SELEX + 46850931 46850942 4.0E-06 AACAAGGAAGTA 12 GLIS3_C2H2_DBD_monomeric_14_1 SELEX - 46850852 46850865 8.0E-06 TACCCCCCACTTGG 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 46850967 46850976 2.0E-06 CACATTCCTT 10 RORA_1_MA0071.1 JASPAR + 46849882 46849891 3.0E-06 TTCAAGGTCA 10 ELF5_MA0136.1 JASPAR - 46850934 46850942 4.0E-06 TACTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 46849651 46849663 6.0E-06 AAAAACACAAACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 46853974 46853986 6.0E-06 TATAAAACAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 46849651 46849663 1.0E-06 AAAAACACAAACA 13 RREB1_MA0073.1 JASPAR + 46849985 46850004 3.0E-06 TCACAACCCACCCCCCAACC 20 TEAD1_MA0090.1 JASPAR - 46855215 46855226 9.0E-06 AACATTCCTCTT 12 V_NFKAPPAB65_01_M00052 TRANSFAC - 46850019 46850028 4.0E-06 TGGGATTTCC 10 V_HNF3B_01_M00131 TRANSFAC + 46853969 46853983 5.0E-06 GGCCCTGTTTGTTTT 15 V_NFKB_C_M00208 TRANSFAC - 46850017 46850028 9.0E-06 TGGGATTTCCCC 12 V_NFKB_C_M00208 TRANSFAC - 46854999 46855010 2.0E-06 CGGGACTTCCCA 12 V_KLF15_Q2_M01714 TRANSFAC + 46852997 46853010 8.0E-06 GAGGAGGGGTGGTG 14 V_XVENT1_01_M00445 TRANSFAC + 46854770 46854782 6.0E-06 AGGCTATTTGCCT 13 V_NFKB_Q6_01_M00774 TRANSFAC + 46854995 46855010 1.0E-06 TTTTTGGGAAGTCCCG 16 V_BTEB3_Q5_M01865 TRANSFAC + 46854272 46854284 3.0E-06 CTAAGGGAAGTGT 13 V_ESR1_01_M02261 TRANSFAC + 46850165 46850184 3.0E-06 ACCTCTGGTCACCTTGTCCT 20 V_PAX4_03_M00378 TRANSFAC - 46850901 46850912 7.0E-06 ATTCCCCACCCC 12 V_ERR3_Q2_01_M02094 TRANSFAC + 46849881 46849893 1.0E-06 GTTCAAGGTCACA 13 V_LRH1_Q5_01_M02098 TRANSFAC + 46849881 46849891 0.0E+00 GTTCAAGGTCA 11 V_LRH1_Q5_01_M02098 TRANSFAC + 46854023 46854033 9.0E-06 GCCCAAGGTCA 11 V_IRF_Q6_01_M00972 TRANSFAC + 46854004 46854014 4.0E-06 AGAAGTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 46850962 46850977 1.0E-05 AGGAAAAGGAATGTGA 16 V_RFX4_03_M02789 TRANSFAC - 46850323 46850337 4.0E-06 TACCCTGGCAACGGC 15 V_RFX4_03_M02789 TRANSFAC + 46850538 46850552 1.0E-06 AACCATAGCAACGCG 15 V_SP1_03_M02281 TRANSFAC - 46855164 46855173 9.0E-06 CCCCTCCTCC 10 V_PU1_Q4_M01172 TRANSFAC - 46849861 46849879 6.0E-06 AATCTTCCCTTCCTCTCTA 19 V_PU1_Q4_M01172 TRANSFAC + 46854616 46854634 1.0E-06 TCCTCCCATTTCCTCTTGT 19 V_PU1_Q4_M01172 TRANSFAC + 46854635 46854653 0.0E+00 TCCCTTCACTTCCTCCCTT 19 V_LYF1_01_M00141 TRANSFAC + 46850073 46850081 9.0E-06 TTTGGGAGG 9 V_AP4_Q6_01_M00927 TRANSFAC + 46854861 46854869 1.0E-05 AACAGCTGC 9 V_PAX6_02_M01391 TRANSFAC - 46849825 46849840 9.0E-06 TGAAAAATTAGTGGTT 16 V_TCFAP2C_04_M02925 TRANSFAC + 46854021 46854034 2.0E-06 TCGCCCAAGGTCAG 14 V_AP1_Q6_M00174 TRANSFAC - 46854655 46854665 7.0E-06 AATGACTAAAT 11 V_MYC_01_M02250 TRANSFAC - 46854072 46854081 4.0E-06 AGCACGTGGC 10 V_GC_01_M00255 TRANSFAC - 46854612 46854625 9.0E-06 AATGGGAGGAGCCT 14 V_HNF3G_Q4_M02015 TRANSFAC + 46853974 46853981 7.0E-06 TGTTTGTT 8 V_HNF3G_Q4_M02015 TRANSFAC + 46854989 46854996 7.0E-06 TGTTTGTT 8 V_MYCMAX_02_M00123 TRANSFAC - 46850790 46850801 3.0E-06 CACCACATGTCA 12 V_CREL_01_M00053 TRANSFAC - 46850019 46850028 3.0E-06 TGGGATTTCC 10 V_AP1_Q6_01_M00925 TRANSFAC + 46854479 46854487 9.0E-06 ATGACTTAA 9 V_AP1_Q4_M00188 TRANSFAC - 46854655 46854665 7.0E-06 AATGACTAAAT 11 MYC_MAX_MA0059.1 JASPAR - 46854072 46854082 3.0E-06 AAGCACGTGGC 11 V_HNF3_Q6_M00791 TRANSFAC - 46853972 46853984 4.0E-06 TAAAACAAACAGG 13 V_HNF3_Q6_M00791 TRANSFAC - 46854987 46854999 1.0E-06 AAAAACAAACAAG 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 46853974 46853984 0.0E+00 TGTTTGTTTTA 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 46854989 46854999 0.0E+00 TGTTTGTTTTT 11 V_NKX22_02_M01372 TRANSFAC + 46850460 46850476 9.0E-06 ATGACTACTTCAAAGGT 17 V_RFXDC2_03_M02790 TRANSFAC + 46850538 46850552 5.0E-06 AACCATAGCAACGCG 15 V_ASCL2_03_M02737 TRANSFAC + 46854858 46854874 3.0E-06 AGTAACAGCTGCCCCAT 17 V_ELF5_01_M01197 TRANSFAC + 46850932 46850942 2.0E-06 ACAAGGAAGTA 11 V_PAX6_Q2_M00979 TRANSFAC - 46849879 46849892 9.0E-06 GTGACCTTGAACAA 14 V_TEF_01_M01305 TRANSFAC - 46855215 46855226 9.0E-06 AACATTCCTCTT 12 V_HOXA5_03_M02271 TRANSFAC + 46849828 46849835 7.0E-06 CACTAATT 8 V_MYCN_01_M02259 TRANSFAC - 46854072 46854081 2.0E-06 AGCACGTGGC 10 V_TBP_06_M02814 TRANSFAC - 46853977 46853992 1.0E-05 TTCCTTTATAAAACAA 16 V_CTCF_02_M01259 TRANSFAC + 46850760 46850779 4.0E-06 GTGAGGCCTGTAGAGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 46850762 46850781 1.0E-06 GAGGCCTGTAGAGGGCGCTA 20 V_FOXO1_Q5_M01216 TRANSFAC - 46854991 46854999 1.0E-06 AAAAACAAA 9 V_IRF7_01_M00453 TRANSFAC + 46850961 46850978 9.0E-06 GAGGAAAAGGAATGTGAT 18 V_SF1_Q6_01_M01132 TRANSFAC - 46849883 46849891 3.0E-06 TGACCTTGA 9 V_SF1_Q6_01_M01132 TRANSFAC - 46854025 46854033 7.0E-06 TGACCTTGG 9 V_ZNF515_01_M01231 TRANSFAC + 46850856 46850865 2.0E-06 GTGGGGGGTA 10 V_ELF1_Q6_M00746 TRANSFAC - 46854623 46854634 1.0E-06 ACAAGAGGAAAT 12 V_HBP1_04_M02866 TRANSFAC - 46854512 46854528 2.0E-06 ATTCCCCATTTTAGATG 17 V_LRH1_Q5_M01142 TRANSFAC - 46849881 46849892 1.0E-06 GTGACCTTGAAC 12 V_GABPBETA_Q3_M01876 TRANSFAC + 46849864 46849874 1.0E-05 AGAGGAAGGGA 11 V_MYF6_04_M02885 TRANSFAC + 46849958 46849972 1.0E-06 CAAAACAGCCACACC 15 V_FOXL1_02_M02857 TRANSFAC - 46853973 46853988 9.0E-06 TTTATAAAACAAACAG 16 V_LUN1_01_M00480 TRANSFAC + 46849438 46849454 3.0E-06 TCCCAGCTACTTGGGAG 17 V_ERR1_Q2_M00511 TRANSFAC + 46849880 46849893 0.0E+00 TGTTCAAGGTCACA 14 V_TEF1_Q6_03_M01817 TRANSFAC + 46855217 46855225 3.0E-06 GAGGAATGT 9 V_ERR2_01_M01589 TRANSFAC + 46849883 46849894 0.0E+00 TCAAGGTCACAC 12 V_ERR2_01_M01589 TRANSFAC + 46854025 46854036 6.0E-06 CCAAGGTCAGAG 12 V_TCF7L2_04_M02922 TRANSFAC - 46850804 46850819 8.0E-06 CGCCATCAATCACTCC 16 V_DMRT7_01_M01151 TRANSFAC + 46855225 46855238 0.0E+00 TTGTTAGATTGTTG 14 V_ZFP206_01_M01742 TRANSFAC + 46850211 46850221 1.0E-06 TGCGCAGGCGC 11 V_TCF4_Q5_M00671 TRANSFAC - 46850468 46850475 1.0E-05 CCTTTGAA 8 V_TBX15_02_M01264 TRANSFAC + 46855199 46855216 2.0E-06 AGGAGTTGGCGTGGCAAA 18 V_PBX1_03_M01017 TRANSFAC - 46850806 46850817 4.0E-06 CCATCAATCACT 12 V_TBP_04_M02918 TRANSFAC - 46849468 46849482 4.0E-06 CCGGTTTAAGCGATT 15 V_ESRRA_03_M02748 TRANSFAC + 46849880 46849896 3.0E-06 TGTTCAAGGTCACACAG 17 V_ZFP281_01_M01597 TRANSFAC + 46850899 46850909 1.0E-06 TGGGGGTGGGG 11 V_NFKAPPAB_01_M00054 TRANSFAC - 46855000 46855009 7.0E-06 GGGACTTCCC 10 V_ZFP281_04_M02831 TRANSFAC + 46849989 46850003 6.0E-06 AACCCACCCCCCAAC 15 V_ZFP281_04_M02831 TRANSFAC - 46850897 46850911 8.0E-06 TTCCCCACCCCCACG 15 V_IPF1_Q4_01_M01013 TRANSFAC + 46850912 46850926 1.0E-05 TGGATCATTAGATGG 15 V_FOXO1_01_M00473 TRANSFAC - 46854991 46855000 4.0E-06 CAAAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC + 46854988 46854996 1.0E-05 TTGTTTGTT 9 V_HOXC10_01_M01361 TRANSFAC - 46850244 46850259 1.0E-05 AAGTGTCGTAAAGCGC 16 V_PIT1_Q6_M00802 TRANSFAC - 46853035 46853052 8.0E-06 ACTTCTTGAATCTATTTC 18 V_FOXO4_01_M00472 TRANSFAC - 46854989 46854999 5.0E-06 AAAAACAAACA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 46850897 46850910 5.0E-06 CGTGGGGGTGGGGA 14 V_ELF5_04_M02241 TRANSFAC - 46850934 46850942 4.0E-06 TACTTCCTT 9 V_PBX1_Q3_M02028 TRANSFAC - 46850807 46850815 8.0E-06 ATCAATCAC 9 V_DMRT1_01_M01146 TRANSFAC + 46855225 46855239 4.0E-06 TTGTTAGATTGTTGC 15 V_SEF1_C_M00214 TRANSFAC - 46854901 46854919 5.0E-06 AGGCCTCCTGGCTGTGGTC 19 V_PAX2_02_M00486 TRANSFAC - 46849667 46849675 2.0E-06 AATAAACTC 9 V_DMRT5_01_M01150 TRANSFAC + 46855223 46855237 1.0E-05 TGTTGTTAGATTGTT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.