Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RBM41


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55285 RNA binding motif protein 41 chrX -106361557 - 106367057 106362057

Transcription Factor Binding Sites

 
Download all TFBS in the RBM41 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
IRF7_IRF_DBD_dimeric_14_1 SELEX + 106362142 106362155 5.0E-06 CAGAAAGAGAAAGT 14
SPIC_ETS_full_monomeric_14_1 SELEX + 106362143 106362156 1.0E-06 AGAAAGAGAAAGTA 14
IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 106361859 106361870 7.0E-06 GAACACGACAAA 12
SP1_MA0079.2 JASPAR + 106361434 106361443 3.0E-06 CCCCTCCCCC 10
SP1_MA0079.2 JASPAR + 106361842 106361851 9.0E-06 CCCCTCCTCC 10
IRF9_IRF_full_trimeric_15_1 SELEX + 106362141 106362155 8.0E-06 ACAGAAAGAGAAAGT 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 106362143 106362157 0.0E+00 AGAAAGAGAAAGTAG 15
Pou5f1_MA0142.1 JASPAR - 106361933 106361947 1.0E-05 TTTTCTTTTGAAAAT 15
SPI1_ETS_full_monomeric_14_1 SELEX + 106362143 106362156 7.0E-06 AGAAAGAGAAAGTA 14
Sox2_MA0143.1 JASPAR - 106361934 106361948 5.0E-06 CTTTTCTTTTGAAAA 15
V_SPI1_01_M01203 TRANSFAC + 106361398 106361414 9.0E-06 AGTAAGGGGAACTGAGC 17
V_CHOP_01_M00249 TRANSFAC + 106361898 106361910 1.0E-06 ACGTGCAATACCC 13
V_POU5F1_02_M02245 TRANSFAC - 106361933 106361947 1.0E-05 TTTTCTTTTGAAAAT 15
V_IRF_Q6_01_M00972 TRANSFAC + 106362144 106362154 3.0E-06 GAAAGAGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC + 106362142 106362157 2.0E-06 CAGAAAGAGAAAGTAG 16
V_NKX25_Q6_M02108 TRANSFAC - 106362159 106362169 8.0E-06 GTCACTTGAGA 11
V_P53_DECAMER_Q2_M00761 TRANSFAC + 106361982 106361991 1.0E-06 AGACAAGTCC 10
V_SP1_03_M02281 TRANSFAC + 106361434 106361443 3.0E-06 CCCCTCCCCC 10
V_SP1_03_M02281 TRANSFAC + 106361842 106361851 9.0E-06 CCCCTCCTCC 10
V_SP1_02_M01303 TRANSFAC - 106361439 106361449 5.0E-06 GGGGTGGGGGG 11
V_ETS_Q4_M00771 TRANSFAC + 106361883 106361894 1.0E-05 AACCGCATCCTG 12
V_ZNF219_01_M01122 TRANSFAC + 106361437 106361448 2.0E-06 CTCCCCCCACCC 12
Ddit3_Cebpa_MA0019.1 JASPAR + 106361898 106361909 2.0E-06 ACGTGCAATACC 12
V_IK1_01_M00086 TRANSFAC - 106361769 106361781 2.0E-06 CTGTGGGAATGCC 13
V_MAZ_Q6_01_M02023 TRANSFAC - 106361430 106361443 1.0E-06 GGGGGAGGGGAGGT 14
V_IRF_Q6_M00772 TRANSFAC - 106362144 106362158 1.0E-06 TCTACTTTCTCTTTC 15
V_STAT5A_02_M00460 TRANSFAC - 106361875 106361898 1.0E-06 TTCTCAGGATGCGGTTTCGTGGGA 24
V_NKX25_Q5_M01043 TRANSFAC - 106362161 106362170 3.0E-06 TGTCACTTGA 10
V_REX1_03_M01744 TRANSFAC - 106361926 106361937 5.0E-06 AAAATGGCTTCC 12
V_RFX_Q6_M00975 TRANSFAC - 106362136 106362144 4.0E-06 CTGTTGCCA 9
V_OCT4_02_M01124 TRANSFAC - 106361932 106361946 1.0E-06 TTTCTTTTGAAAATG 15
V_ICSBP_Q6_M00699 TRANSFAC + 106362145 106362156 3.0E-06 AAAGAGAAAGTA 12
V_BCL6B_04_M02844 TRANSFAC + 106361439 106361454 2.0E-06 CCCCCCACCCCATAAA 16
V_TAL1_01_M01591 TRANSFAC - 106361940 106361952 7.0E-06 CTACCTTTTCTTT 13
V_MEIS1_01_M00419 TRANSFAC + 106362163 106362174 9.0E-06 AAGTGACAGGTA 12
V_ZFP281_01_M01597 TRANSFAC - 106361434 106361444 2.0E-06 GGGGGGAGGGG 11
V_IRF1_Q6_01_M01881 TRANSFAC - 106362143 106362156 0.0E+00 TACTTTCTCTTTCT 14
V_SOX2_01_M02246 TRANSFAC - 106361934 106361948 5.0E-06 CTTTTCTTTTGAAAA 15
V_ZFP281_04_M02831 TRANSFAC + 106361432 106361446 4.0E-06 CTCCCCTCCCCCCAC 15
V_ZFP281_04_M02831 TRANSFAC + 106361433 106361447 0.0E+00 TCCCCTCCCCCCACC 15
V_UF1H3BETA_Q6_M01068 TRANSFAC - 106361433 106361446 6.0E-06 GTGGGGGGAGGGGA 14
V_BRCA_01_M01082 TRANSFAC - 106362139 106362146 1.0E-05 TTCTGTTG 8
V_RFX1_02_M00281 TRANSFAC + 106362127 106362144 1.0E-05 ACAGAGCTATGGCAACAG 18
V_NANOG_02_M01247 TRANSFAC + 106361934 106361953 4.0E-06 TTTTCAAAAGAAAAGGTAGA 20
V_OCT4_01_M01125 TRANSFAC - 106361933 106361947 3.0E-06 TTTTCTTTTGAAAAT 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL