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TMEM39A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55254 transmembrane protein 39A chr3 - 119182029 - 119187529 119182529 Transcription Factor Binding Sites   Download all TFBS in the TMEM39A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU3F3_POU_DBD_monomeric_12_1 SELEX - 119187479 119187490 4.0E-06 TAGCATAAATTT 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 119182782 119182799 1.0E-06 AGGTGTCACCTAGGGTCA 18 POU3F2_POU_DBD_monomeric_13_1 SELEX - 119187479 119187491 6.0E-06 ATAGCATAAATTT 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 119182959 119182976 9.0E-06 GTAACAAATGGTAATTAC 18 Zfp423_MA0116.1 JASPAR + 119187407 119187421 6.0E-06 GCAACCTTTGGGGTC 15 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 119187397 119187405 4.0E-06 TATGCTAAT 9 YY1_C2H2_full_monomeric_11_1 SELEX + 119182751 119182761 3.0E-06 ACCGCCATTTT 11 POU3F4_POU_DBD_monomeric_11_1 SELEX - 119187479 119187489 9.0E-06 AGCATAAATTT 11 POU2F3_POU_DBD_monomeric_9_1 SELEX + 119187397 119187405 3.0E-06 TATGCTAAT 9 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 119182782 119182799 4.0E-06 AGGTGTCACCTAGGGTCA 18 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 119182485 119182496 0.0E+00 GATGACGTCAGC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 119182485 119182496 0.0E+00 GCTGACGTCATC 12 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 119182048 119182063 9.0E-06 AGACCACAAACTTCAA 16 POU2F2_POU_DBD_monomeric_11_1 SELEX + 119187396 119187406 4.0E-06 CTATGCTAATT 11 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 119182485 119182496 7.0E-06 GATGACGTCAGC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 119182485 119182496 5.0E-06 GCTGACGTCATC 12 POU3F4_POU_DBD_monomeric_9_1 SELEX + 119187397 119187405 3.0E-06 TATGCTAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 119187397 119187405 3.0E-06 TATGCTAAT 9 SPIB_ETS_DBD_monomeric_14_1 SELEX - 119182641 119182654 9.0E-06 CGAAAGAGGAAATG 14 JDP2_bZIP_full_dimeric_12_1 SELEX + 119182485 119182496 2.0E-06 GATGACGTCAGC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 119182485 119182496 2.0E-06 GCTGACGTCATC 12 RUNX3_RUNX_full_monomeric_10_1 SELEX + 119182048 119182057 6.0E-06 AGACCACAAA 10 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 119182048 119182063 8.0E-06 AGACCACAAACTTCAA 16 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 119182783 119182799 7.0E-06 GGTGTCACCTAGGGTCA 17 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 119182824 119182837 0.0E+00 AAGTCATGAAGTCA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 119182484 119182497 5.0E-06 CGATGACGTCAGCT 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 119182484 119182497 5.0E-06 AGCTGACGTCATCG 14 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 119182290 119182299 9.0E-06 ACCAGCTGCT 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 119182989 119183004 7.0E-06 GTGTCCAAGGTCCAGA 16 CREB3_bZIP_full_dimeric_14_1 SELEX + 119182484 119182497 3.0E-06 CGATGACGTCAGCT 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 119182484 119182497 3.0E-06 AGCTGACGTCATCG 14 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 119182865 119182881 9.0E-06 TGTTTGCTAAGAACTAG 17 MYBL1_MYB_DBD_dimeric_17_1 SELEX - 119187360 119187376 3.0E-06 GGAATTTATAACAGTTG 17 YY2_C2H2_full_monomeric_11_1 SELEX + 119182751 119182761 0.0E+00 ACCGCCATTTT 11 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 119182783 119182799 5.0E-06 GGTGTCACCTAGGGTCA 17 POU6F2_POU_full_monomeric_10_1 SELEX - 119187009 119187018 7.0E-06 GCTCATTAGA 10 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 119182950 119182966 1.0E-05 GAAAATACAGTAATTAC 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 119182950 119182966 7.0E-06 GTAATTACTGTATTTTC 17 CREB3L1_bZIP_full_dimeric_14_1 SELEX - 119182463 119182476 8.0E-06 CTGCCACGTCTGCT 14 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 119182698 119182713 0.0E+00 ACAGCAAGAAGGATCA 16 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 119187064 119187079 2.0E-06 GCAGAAATAAGGAACA 16 POU2F1_POU_DBD_monomeric_12_1 SELEX + 119187395 119187406 8.0E-06 GCTATGCTAATT 12 LHX6_homeodomain_full_dimeric_12_1 SELEX - 119187402 119187413 1.0E-05 AGGTTGCAATTA 12 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 119182482 119182499 6.0E-06 GGCGATGACGTCAGCTAC 18 RUNX1_MA0002.2 JASPAR - 119182048 119182058 8.0E-06 GTTTGTGGTCT 11 RUNX1_MA0002.2 JASPAR + 119182887 119182897 8.0E-06 TGCTGTGGTTA 11 ETV6_ETS_full_dimeric_15_1 SELEX - 119182641 119182655 5.0E-06 CCGAAAGAGGAAATG 15 POU3F2_POU_DBD_monomeric_12_1 SELEX + 119187396 119187407 8.0E-06 CTATGCTAATTG 12 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 119182484 119182497 1.0E-06 CGATGACGTCAGCT 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 119182484 119182497 1.0E-06 AGCTGACGTCATCG 14 V_DMRT4_01_M01149 TRANSFAC - 119182967 119182979 4.0E-06 ATTGTAACAAATG 13 V_FOXP1_01_M00987 TRANSFAC - 119187452 119187471 5.0E-06 ATGTGTGTGTGTGTGTGTGT 20 V_AML_Q6_M00769 TRANSFAC - 119182046 119182060 0.0E+00 AAGTTTGTGGTCTCC 15 V_MEQCJUN_02_M02048 TRANSFAC + 119182485 119182495 5.0E-06 GATGACGTCAG 11 V_MEQCJUN_02_M02048 TRANSFAC - 119182486 119182496 2.0E-06 GCTGACGTCAT 11 V_OSF2_Q6_M00731 TRANSFAC + 119182050 119182057 1.0E-05 ACCACAAA 8 V_OSF2_Q6_M00731 TRANSFAC + 119182908 119182915 1.0E-05 ACCACAAA 8 V_DMRT3_01_M01148 TRANSFAC + 119182967 119182981 0.0E+00 CATTTGTTACAATAT 15 V_DLX3_01_M01400 TRANSFAC + 119182954 119182970 6.0E-06 ATACAGTAATTACCATT 17 V_HMGIY_Q3_M01010 TRANSFAC - 119182946 119182960 7.0E-06 ACTGTATTTTCTTAG 15 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 119187363 119187374 1.0E-06 AATTTATAACAG 12 V_CREB_Q4_M00178 TRANSFAC - 119182485 119182496 3.0E-06 GCTGACGTCATC 12 V_ETS_B_M00340 TRANSFAC - 119182638 119182651 2.0E-06 AAGAGGAAATGCTT 14 V_SOX5_01_M00042 TRANSFAC - 119182861 119182870 7.0E-06 CAAACAATAA 10 V_MAFB_03_M02879 TRANSFAC - 119187479 119187493 4.0E-06 AAATAGCATAAATTT 15 V_CREB_Q4_01_M00917 TRANSFAC + 119182484 119182494 0.0E+00 CGATGACGTCA 11 V_CREB_Q4_01_M00917 TRANSFAC - 119182487 119182497 5.0E-06 AGCTGACGTCA 11 V_SRY_02_M00160 TRANSFAC - 119182860 119182871 9.0E-06 GCAAACAATAAG 12 V_POU2F3_01_M01476 TRANSFAC + 119187394 119187409 4.0E-06 TGCTATGCTAATTGCA 16 V_HOXD1_01_M01448 TRANSFAC - 119182954 119182970 4.0E-06 AATGGTAATTACTGTAT 17 V_HOXD1_01_M01448 TRANSFAC + 119182955 119182971 3.0E-06 TACAGTAATTACCATTT 17 V_ATF3_Q6_01_M01863 TRANSFAC + 119182486 119182496 1.0E-06 ATGACGTCAGC 11 V_HNF3_Q6_01_M01012 TRANSFAC + 119182860 119182877 5.0E-06 CTTATTGTTTGCTAAGAA 18 V_HOXA2_01_M01402 TRANSFAC - 119182954 119182969 2.0E-06 ATGGTAATTACTGTAT 16 V_HOXA2_01_M01402 TRANSFAC + 119182956 119182971 2.0E-06 ACAGTAATTACCATTT 16 V_JUNDM2_03_M02772 TRANSFAC + 119182483 119182498 4.0E-06 GCGATGACGTCAGCTA 16 V_JUNDM2_03_M02772 TRANSFAC - 119182483 119182498 1.0E-06 TAGCTGACGTCATCGC 16 V_HFH4_01_M00742 TRANSFAC + 119182862 119182874 5.0E-06 TATTGTTTGCTAA 13 V_HOXC6_01_M01406 TRANSFAC - 119182954 119182970 5.0E-06 AATGGTAATTACTGTAT 17 V_HOXC6_01_M01406 TRANSFAC + 119182955 119182971 2.0E-06 TACAGTAATTACCATTT 17 V_PU1_Q4_M01172 TRANSFAC + 119182635 119182653 4.0E-06 CCAAAGCATTTCCTCTTTC 19 V_PU1_Q4_M01172 TRANSFAC - 119187068 119187086 2.0E-06 TGCTTTTTGTTCCTTATTT 19 V_ATF4_Q2_M00514 TRANSFAC - 119182828 119182839 3.0E-06 CATGACTTCATG 12 V_AP4_Q6_01_M00927 TRANSFAC + 119182290 119182298 6.0E-06 ACCAGCTGC 9 V_EVX1_01_M01475 TRANSFAC - 119182954 119182970 5.0E-06 AATGGTAATTACTGTAT 17 V_EVX1_01_M01475 TRANSFAC + 119187006 119187022 9.0E-06 TGTTCTAATGAGCTGAG 17 V_PAX4_01_M00373 TRANSFAC + 119182830 119182850 0.0E+00 TGAAGTCATGCGTCAGCATCC 21 V_EVX2_01_M01386 TRANSFAC - 119182955 119182971 9.0E-06 AAATGGTAATTACTGTA 17 V_HOXA6_01_M01392 TRANSFAC - 119182954 119182969 1.0E-06 ATGGTAATTACTGTAT 16 V_HOXA6_01_M01392 TRANSFAC + 119182956 119182971 0.0E+00 ACAGTAATTACCATTT 16 V_ZFP105_03_M02827 TRANSFAC - 119182858 119182872 9.0E-06 AGCAAACAATAAGCG 15 V_RUNX1_01_M02257 TRANSFAC - 119182048 119182058 8.0E-06 GTTTGTGGTCT 11 V_RUNX1_01_M02257 TRANSFAC + 119182887 119182897 8.0E-06 TGCTGTGGTTA 11 V_ARID5A_03_M02736 TRANSFAC - 119182971 119182984 2.0E-06 TTAATATTGTAACA 14 V_ARID5A_03_M02736 TRANSFAC + 119182975 119182988 2.0E-06 ACAATATTAAAAGT 14 V_XFD3_01_M00269 TRANSFAC - 119182861 119182874 8.0E-06 TTAGCAAACAATAA 14 V_SP1_Q6_M00196 TRANSFAC - 119182608 119182620 8.0E-06 AAGGGGCGGGACC 13 V_HOXA1_01_M01487 TRANSFAC + 119182954 119182969 5.0E-06 ATACAGTAATTACCAT 16 V_HOXA1_01_M01487 TRANSFAC - 119182956 119182971 3.0E-06 AAATGGTAATTACTGT 16 V_HOXB6_01_M01460 TRANSFAC + 119182954 119182969 5.0E-06 ATACAGTAATTACCAT 16 V_HOXB6_01_M01460 TRANSFAC - 119182956 119182971 0.0E+00 AAATGGTAATTACTGT 16 V_GSH2_01_M01326 TRANSFAC - 119182954 119182969 2.0E-06 ATGGTAATTACTGTAT 16 V_SFPI1_04_M02896 TRANSFAC + 119187066 119187079 1.0E-05 AGAAATAAGGAACA 14 V_YY1_Q6_02_M01035 TRANSFAC + 119182751 119182761 1.0E-06 ACCGCCATTTT 11 V_GR_01_M00955 TRANSFAC + 119186991 119187017 8.0E-06 TATAAAACAGAAAAGTGTTCTAATGAG 27 V_SOX12_04_M02900 TRANSFAC + 119182094 119182109 1.0E-06 AGGTAGACAAAGCAGT 16 V_PEBP_Q6_M00984 TRANSFAC + 119182046 119182060 0.0E+00 GGAGACCACAAACTT 15 V_ATF3_Q6_M00513 TRANSFAC - 119182484 119182497 0.0E+00 AGCTGACGTCATCG 14 V_CREB_Q2_01_M00916 TRANSFAC - 119182483 119182496 1.0E-06 GCTGACGTCATCGC 14 V_GATA4_Q3_M00632 TRANSFAC + 119187066 119187077 4.0E-06 AGAAATAAGGAA 12 V_ELF1_Q6_M00746 TRANSFAC - 119182642 119182653 0.0E+00 GAAAGAGGAAAT 12 V_HOXB7_01_M01396 TRANSFAC - 119182954 119182969 8.0E-06 ATGGTAATTACTGTAT 16 V_LRH1_Q5_M01142 TRANSFAC - 119182991 119183002 4.0E-06 TGGACCTTGGAC 12 V_CREM_Q6_M01820 TRANSFAC - 119182484 119182494 6.0E-06 TGACGTCATCG 11 V_CREM_Q6_M01820 TRANSFAC + 119182487 119182497 1.0E-05 TGACGTCAGCT 11 V_VJUN_01_M00036 TRANSFAC + 119182483 119182498 1.0E-06 GCGATGACGTCAGCTA 16 V_VJUN_01_M00036 TRANSFAC - 119182483 119182498 9.0E-06 TAGCTGACGTCATCGC 16 V_MTF1_06_M02882 TRANSFAC + 119187068 119187081 8.0E-06 AAATAAGGAACAAA 14 V_TBP_01_M00471 TRANSFAC + 119187367 119187374 8.0E-06 TATAAATT 8 V_OCT2_01_M01368 TRANSFAC + 119187394 119187409 6.0E-06 TGCTATGCTAATTGCA 16 V_ATF1_03_M02738 TRANSFAC + 119182483 119182498 1.0E-06 GCGATGACGTCAGCTA 16 V_ATF1_03_M02738 TRANSFAC - 119182483 119182498 3.0E-06 TAGCTGACGTCATCGC 16 V_ZBTB12_04_M02928 TRANSFAC - 119187004 119187018 0.0E+00 GCTCATTAGAACACT 15 V_ATF2_Q5_M01862 TRANSFAC + 119182484 119182495 3.0E-06 CGATGACGTCAG 12 V_ATF2_Q5_M01862 TRANSFAC - 119182486 119182497 1.0E-06 AGCTGACGTCAT 12 V_DMRT7_01_M01151 TRANSFAC + 119182970 119182983 1.0E-06 TTGTTACAATATTA 14 V_PADS_C_M00211 TRANSFAC - 119182047 119182055 4.0E-06 TGTGGTCTC 9 V_FOX_Q2_M00809 TRANSFAC + 119182862 119182874 1.0E-06 TATTGTTTGCTAA 13 V_ETS1_B_M00339 TRANSFAC - 119182636 119182650 3.0E-06 AGAGGAAATGCTTTG 15 V_MEF3_B_M00319 TRANSFAC + 119182794 119182806 1.0E-05 GGGTCACGTTACT 13 V_OCT1_07_M00248 TRANSFAC + 119187395 119187406 1.0E-06 GCTATGCTAATT 12 V_RFX3_05_M02892 TRANSFAC - 119182724 119182746 0.0E+00 ACTTGTACATGGTTACTACATGG 23 V_YY1_01_M00059 TRANSFAC + 119182719 119182735 5.0E-06 GGACTCCATGTAGTAAC 17 V_HOXB3_01_M01330 TRANSFAC + 119187006 119187022 6.0E-06 TGTTCTAATGAGCTGAG 17 V_HNF3B_Q6_M02014 TRANSFAC + 119182864 119182872 6.0E-06 TTGTTTGCT 9 V_IRF1_01_M00062 TRANSFAC + 119182976 119182988 1.0E-05 CAATATTAAAAGT 13 V_SRY_05_M02917 TRANSFAC - 119182858 119182874 1.0E-06 TTAGCAAACAATAAGCG 17 V_HOXD3_01_M01338 TRANSFAC - 119182956 119182971 8.0E-06 AAATGGTAATTACTGT 16 V_LHX4_01_M01421 TRANSFAC + 119182955 119182971 8.0E-06 TACAGTAATTACCATTT 17 V_GATA5_03_M02756 TRANSFAC + 119187488 119187504 6.0E-06 CTATTTGATAAGAGGCA 17 V_HMEF2_Q6_M00406 TRANSFAC + 119187364 119187379 6.0E-06 TGTTATAAATTCCTAT 16 V_DLX1_01_M01439 TRANSFAC + 119182954 119182967 9.0E-06 ATACAGTAATTACC 14 V_SP1_Q4_01_M00932 TRANSFAC - 119182608 119182620 9.0E-06 AAGGGGCGGGACC 13 V_BARX1_01_M01340 TRANSFAC - 119182954 119182969 0.0E+00 ATGGTAATTACTGTAT 16 V_BARX1_01_M01340 TRANSFAC + 119182956 119182971 1.0E-06 ACAGTAATTACCATTT 16 V_ATF_B_M00338 TRANSFAC - 119182484 119182495 2.0E-06 CTGACGTCATCG 12 V_ARID5A_04_M02840 TRANSFAC - 119187369 119187385 6.0E-06 TTTGTAATAGGAATTTA 17 V_HOXB5_01_M01319 TRANSFAC - 119182954 119182969 1.0E-06 ATGGTAATTACTGTAT 16 V_HOXB5_01_M01319 TRANSFAC + 119182956 119182971 1.0E-06 ACAGTAATTACCATTT 16 V_DMRT5_01_M01150 TRANSFAC + 119182968 119182982 1.0E-06 ATTTGTTACAATATT 15 V_PAX6_01_M00097 TRANSFAC - 119182829 119182849 5.0E-06 GATGCTGACGCATGACTTCAT 21 V_HOX13_02_M01452 TRANSFAC - 119182954 119182969 5.0E-06 ATGGTAATTACTGTAT 16 V_HOX13_02_M01452 TRANSFAC + 119182956 119182971 1.0E-06 ACAGTAATTACCATTT 16 V_HOXC8_01_M01321 TRANSFAC + 119182954 119182969 2.0E-06 ATACAGTAATTACCAT 16 V_HOXC8_01_M01321 TRANSFAC - 119182956 119182971 0.0E+00 AAATGGTAATTACTGT 16 V_IPF1_06_M01438 TRANSFAC - 119182954 119182969 4.0E-06 ATGGTAATTACTGTAT 16 V_IPF1_06_M01438 TRANSFAC + 119182956 119182971 3.0E-06 ACAGTAATTACCATTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.