Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SMU1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55234 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) chr9 -33076214 - 33081714 33076714

Transcription Factor Binding Sites

 
Download all TFBS in the SMU1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 33081215 33081232 3.0E-06 TATATAAATAAAGAAACA 18
CTCF_MA0139.1 JASPAR + 33081451 33081469 3.0E-06 AATCCAGCAGAGGGCAGGA 19
SOX21_HMG_DBD_dimeric_15_1 SELEX - 33081480 33081494 2.0E-06 TACAATGGTAGTTTT 15
EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 33076255 33076264 1.0E-05 GATAATTAGA 10
VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 33076256 33076263 5.0E-06 CTAATTAT 8
DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 33076255 33076264 6.0E-06 TCTAATTATC 10
IRF7_IRF_DBD_dimeric_14_1 SELEX - 33076586 33076599 9.0E-06 TCGAAATCGAATCT 14
ALX3_homeodomain_full_monomeric_10_1 SELEX - 33076255 33076264 6.0E-06 TCTAATTATC 10
SRY_HMG_DBD_dimeric_15_1 SELEX + 33081480 33081494 4.0E-06 AAAACTACCATTGTA 15
Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 33080860 33080872 3.0E-06 ATCAGGGGTTAAA 13
SOX2_HMG_full_dimeric_17_1 SELEX + 33081479 33081495 2.0E-06 AAAAACTACCATTGTAA 17
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 33081347 33081363 6.0E-06 GTGAACAAAAGTAACCC 17
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 33081215 33081226 6.0E-06 TATATAAATAAA 12
FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 33081215 33081226 0.0E+00 TATATAAATAAA 12
POU3F2_POU_DBD_monomeric_13_1 SELEX + 33081217 33081229 1.0E-05 TATAAATAAAGAA 13
FOXL1_forkhead_full_dimeric_13_1 SELEX + 33081213 33081225 4.0E-06 CATATATAAATAA 13
FOXL1_forkhead_full_dimeric_13_1 SELEX + 33081217 33081229 1.0E-06 TATAAATAAAGAA 13
SRY_HMG_DBD_dimeric_16_1 SELEX + 33081479 33081494 5.0E-06 AAAAACTACCATTGTA 16
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 33081215 33081225 1.0E-06 TATATAAATAA 11
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 33080968 33080979 8.0E-06 AAATTACAATCT 12
SOX8_HMG_full_dimeric_15_1 SELEX - 33081480 33081494 7.0E-06 TACAATGGTAGTTTT 15
Alx1_homeodomain_DBD_monomeric_10_1 SELEX - 33076255 33076264 1.0E-05 TCTAATTATC 10
STAT1_MA0137.2 JASPAR - 33081394 33081408 6.0E-06 CATTTACCGGAAAGC 15
Tp73_p53l_DBD_dimeric_18_1 SELEX + 33080705 33080722 5.0E-06 TTCAAGTCAGAACTTGTT 18
Tp73_p53l_DBD_dimeric_18_1 SELEX - 33080705 33080722 1.0E-06 AACAAGTTCTGACTTGAA 18
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 33081215 33081226 2.0E-06 TATATAAATAAA 12
Sox17_HMG_DBD_dimeric_15_1 SELEX + 33081480 33081494 9.0E-06 AAAACTACCATTGTA 15
IRF1_MA0050.1 JASPAR + 33080784 33080795 1.0E-05 AGAAATGAAACT 12
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 33081218 33081228 5.0E-06 ATAAATAAAGA 11
MEF2A_MA0052.1 JASPAR - 33081216 33081225 1.0E-05 TTATTTATAT 10
HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 33076255 33076264 7.0E-06 GATAATTAGA 10
SOX14_HMG_DBD_dimeric_13_1 SELEX + 33081481 33081493 9.0E-06 AAACTACCATTGT 13
SOX15_HMG_full_dimeric_15_1 SELEX + 33081480 33081494 1.0E-06 AAAACTACCATTGTA 15
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 33081218 33081228 2.0E-06 ATAAATAAAGA 11
SOX7_HMG_full_dimeric_17_1 SELEX - 33081479 33081495 3.0E-06 TTACAATGGTAGTTTTT 17
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 33081239 33081253 4.0E-06 CACACACACAGACAA 15
IRF9_IRF_full_trimeric_15_1 SELEX - 33076586 33076600 2.0E-06 ATCGAAATCGAATCT 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 33081580 33081594 4.0E-06 TAGAAGGGAAAGTCA 15
POU3F1_POU_DBD_monomeric_12_2 SELEX + 33081214 33081225 9.0E-06 ATATATAAATAA 12
POU3F1_POU_DBD_monomeric_12_2 SELEX + 33081218 33081229 7.0E-06 ATAAATAAAGAA 12
IRF4_IRF_full_dimeric_15_1 SELEX - 33076585 33076599 6.0E-06 TCGAAATCGAATCTT 15
ETV6_ETS_full_monomeric_10_1 SELEX - 33076695 33076704 1.0E-06 AGCGGAAGTG 10
ETV6_ETS_full_dimeric_15_1 SELEX - 33076695 33076709 6.0E-06 ACCCAAGCGGAAGTG 15
Sox3_HMG_DBD_dimeric_17_1 SELEX - 33081479 33081495 3.0E-06 TTACAATGGTAGTTTTT 17
ELF5_MA0136.1 JASPAR - 33081568 33081576 4.0E-06 TACTTCCTT 9
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 33081216 33081228 0.0E+00 ATATAAATAAAGA 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 33081220 33081232 2.0E-06 AAATAAAGAAACA 13
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 33081215 33081225 1.0E-06 TATATAAATAA 11
TP63_p53l_DBD_dimeric_18_1 SELEX + 33080705 33080722 3.0E-06 TTCAAGTCAGAACTTGTT 18
TP63_p53l_DBD_dimeric_18_1 SELEX - 33080705 33080722 0.0E+00 AACAAGTTCTGACTTGAA 18
IRF2_MA0051.1 JASPAR + 33080783 33080800 5.0E-06 GAGAAATGAAACTTTATC 18
SOX9_HMG_full_dimeric_17_1 SELEX - 33081479 33081495 3.0E-06 TTACAATGGTAGTTTTT 17
V_FOXP1_01_M00987 TRANSFAC - 33081206 33081225 9.0E-06 TTATTTATATATGGATGGAG 20
V_HNF3B_01_M00131 TRANSFAC - 33081215 33081229 5.0E-06 TTCTTTATTTATATA 15
V_KLF15_Q2_M01714 TRANSFAC + 33076748 33076761 9.0E-06 GAGTAGGGGCGAGG 14
V_STAT3_01_M00225 TRANSFAC + 33081391 33081411 2.0E-06 CCTGCTTTCCGGTAAATGGGC 21
V_FREAC7_01_M00293 TRANSFAC + 33081213 33081228 2.0E-06 CATATATAAATAAAGA 16
V_TCF3_01_M01594 TRANSFAC - 33077224 33077236 4.0E-06 CTTTTCTTTTTCA 13
V_SMAD3_Q6_01_M01888 TRANSFAC - 33080651 33080663 6.0E-06 ATGCAGACAGAGT 13
V_FOXA2_04_M02749 TRANSFAC + 33081213 33081229 1.0E-06 CATATATAAATAAAGAA 17
V_STAT3STAT3_Q3_M01220 TRANSFAC + 33081396 33081409 1.0E-05 TTTCCGGTAAATGG 14
V_HMGIY_Q3_M01010 TRANSFAC - 33080963 33080977 0.0E+00 ATTGTAATTTCTTAT 15
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 33076845 33076856 1.0E-05 ACTGTTTAAAAG 12
V_SPIB_02_M02041 TRANSFAC + 33081567 33081576 4.0E-06 AAAGGAAGTA 10
V_SATB1_Q3_M01723 TRANSFAC + 33081218 33081233 0.0E+00 ATAAATAAAGAAACAA 16
V_IRF_Q6_01_M00972 TRANSFAC + 33080784 33080794 7.0E-06 AGAAATGAAAC 11
V_IRF2_Q6_M01882 TRANSFAC + 33081579 33081594 8.0E-06 GTAGAAGGGAAAGTCA 16
V_GTF2IRD1_01_M01229 TRANSFAC - 33080678 33080686 3.0E-06 GGGATTATG 9
V_FOXO3A_Q1_M01137 TRANSFAC + 33081217 33081228 4.0E-06 TATAAATAAAGA 12
V_CEBP_Q2_M00190 TRANSFAC + 33076195 33076208 6.0E-06 ACATTGCATAAGCT 14
V_IRF3_05_M02767 TRANSFAC + 33080783 33080796 7.0E-06 GAGAAATGAAACTT 14
V_HNF3_Q6_01_M01012 TRANSFAC - 33081212 33081229 1.0E-06 TTCTTTATTTATATATGG 18
V_FOXJ1_03_M02750 TRANSFAC + 33081215 33081230 9.0E-06 TATATAAATAAAGAAA 16
V_HFH4_01_M00742 TRANSFAC - 33081215 33081227 9.0E-06 CTTTATTTATATA 13
V_DLX2_01_M01468 TRANSFAC + 33076253 33076268 9.0E-06 CAGATAATTAGACTGG 16
V_PITX2_Q6_M02114 TRANSFAC + 33076888 33076897 1.0E-06 TGTAATCCCA 10
V_AREB6_04_M00415 TRANSFAC + 33080701 33080709 8.0E-06 CTGTTTCAA 9
V_CEBPB_01_M00109 TRANSFAC - 33076195 33076208 2.0E-06 AGCTTATGCAATGT 14
V_MEF2A_Q6_M02024 TRANSFAC - 33081215 33081224 5.0E-06 TATTTATATA 10
V_RPC155_01_M01798 TRANSFAC + 33076934 33076949 0.0E+00 TCGTGAGTTCGAGACC 16
V_SPIC_01_M02042 TRANSFAC - 33076695 33076704 9.0E-06 AGCGGAAGTG 10
V_SPIC_01_M02042 TRANSFAC + 33081567 33081576 4.0E-06 AAAGGAAGTA 10
V_GC_01_M00255 TRANSFAC + 33076794 33076807 4.0E-06 AGAGGGCGGAGTTT 14
V_HELIOSA_02_M01004 TRANSFAC + 33081521 33081531 4.0E-06 TTAAGGAAAAG 11
V_FOXA2_02_M02853 TRANSFAC - 33080714 33080728 8.0E-06 GCAAATAACAAGTTC 15
V_ZFP105_03_M02827 TRANSFAC - 33080715 33080729 1.0E-06 AGCAAATAACAAGTT 15
V_TCFAP2C_03_M02821 TRANSFAC + 33081358 33081372 4.0E-06 TAACCCCGAGGGAAA 15
V_SREBP1_01_M00220 TRANSFAC + 33076922 33076932 8.0E-06 GATCACCTGAG 11
V_TEF_Q6_M00672 TRANSFAC + 33081214 33081225 2.0E-06 ATATATAAATAA 12
V_STAT1_01_M00224 TRANSFAC + 33081391 33081411 4.0E-06 CCTGCTTTCCGGTAAATGGGC 21
V_STAT1_01_M00224 TRANSFAC - 33081391 33081411 6.0E-06 GCCCATTTACCGGAAAGCAGG 21
V_P53_03_M01651 TRANSFAC + 33080704 33080723 8.0E-06 TTTCAAGTCAGAACTTGTTA 20
V_P53_03_M01651 TRANSFAC - 33080704 33080723 6.0E-06 TAACAAGTTCTGACTTGAAA 20
V_HOXB6_01_M01460 TRANSFAC + 33080962 33080977 8.0E-06 TATAAGAAATTACAAT 16
V_MAZ_Q6_01_M02023 TRANSFAC + 33080629 33080642 7.0E-06 GAGGGTGGGGAGTG 14
V_HNF3_Q6_M00791 TRANSFAC + 33081214 33081226 1.0E-06 ATATATAAATAAA 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC - 33081214 33081224 9.0E-06 TATTTATATAT 11
V_IRF_Q6_M00772 TRANSFAC - 33080784 33080798 0.0E+00 TAAAGTTTCATTTCT 15
V_LXR_DR4_Q3_M00766 TRANSFAC + 33081348 33081363 8.0E-06 TGAACAAAAGTAACCC 16
V_ISRE_01_M00258 TRANSFAC - 33080782 33080796 1.0E-06 AAGTTTCATTTCTCA 15
V_ELF5_01_M01197 TRANSFAC + 33081566 33081576 1.0E-06 TAAAGGAAGTA 11
V_XFD2_01_M00268 TRANSFAC + 33081215 33081228 0.0E+00 TATATAAATAAAGA 14
V_ISGF3G_03_M02771 TRANSFAC + 33080783 33080797 5.0E-06 GAGAAATGAAACTTT 15
V_BRACH_01_M00150 TRANSFAC - 33080858 33080881 8.0E-06 CGACTGTCAATCAGGGGTTAAAAA 24
V_TBP_06_M02814 TRANSFAC + 33081211 33081226 0.0E+00 TCCATATATAAATAAA 16
V_TBP_06_M02814 TRANSFAC - 33081211 33081226 1.0E-06 TTTATTTATATATGGA 16
V_TBP_06_M02814 TRANSFAC + 33081213 33081228 1.0E-06 CATATATAAATAAAGA 16
V_TBP_06_M02814 TRANSFAC - 33081213 33081228 0.0E+00 TCTTTATTTATATATG 16
V_TBP_06_M02814 TRANSFAC - 33081215 33081230 1.0E-05 TTTCTTTATTTATATA 16
V_CTCF_02_M01259 TRANSFAC + 33081448 33081467 3.0E-06 TTGAATCCAGCAGAGGGCAG 20
V_CTCF_01_M01200 TRANSFAC + 33081450 33081469 5.0E-06 GAATCCAGCAGAGGGCAGGA 20
V_BLIMP1_Q6_M01066 TRANSFAC + 33081579 33081594 2.0E-06 GTAGAAGGGAAAGTCA 16
V_IRF7_01_M00453 TRANSFAC - 33076583 33076600 4.0E-06 ATCGAAATCGAATCTTCG 18
V_NEUROD_02_M01288 TRANSFAC + 33080725 33080736 0.0E+00 TTGCTGCTGTGC 12
V_HBP1_04_M02866 TRANSFAC + 33081482 33081498 5.0E-06 AACTACCATTGTAAACC 17
V_HFH8_01_M00294 TRANSFAC - 33081215 33081227 1.0E-06 CTTTATTTATATA 13
V_CREBP1CJUN_01_M00041 TRANSFAC - 33076689 33076696 1.0E-05 TGACGTTA 8
V_MTF1_06_M02882 TRANSFAC + 33081214 33081227 4.0E-06 ATATATAAATAAAG 14
V_TBP_01_M00471 TRANSFAC + 33081217 33081224 4.0E-06 TATAAATA 8
V_POU6F1_02_M01462 TRANSFAC + 33076252 33076268 9.0E-06 GCAGATAATTAGACTGG 17
V_GABPBETA_Q3_M01876 TRANSFAC - 33076694 33076704 1.0E-06 AGCGGAAGTGA 11
V_TAL1_01_M01591 TRANSFAC - 33076215 33076227 1.0E-06 CTTGCTTCTCTCC 13
V_CEBPA_01_M00116 TRANSFAC + 33076195 33076208 2.0E-06 ACATTGCATAAGCT 14
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 33080629 33080637 8.0E-06 GAGGGTGGG 9
V_FOXL1_04_M02753 TRANSFAC + 33081213 33081229 0.0E+00 CATATATAAATAAAGAA 17
V_PLAG1_01_M01778 TRANSFAC + 33080620 33080635 6.0E-06 GGGGCAGTGGAGGGTG 16
V_NANOG_01_M01123 TRANSFAC - 33081402 33081413 1.0E-06 GGGCCCATTTAC 12
V_TCF7_04_M02921 TRANSFAC + 33080959 33080973 4.0E-06 ATGTATAAGAAATTA 15
V_BDP1_01_M01796 TRANSFAC - 33076938 33076949 2.0E-06 GGTCTCGAACTC 12
V_STAT1STAT1_Q3_M01212 TRANSFAC - 33081395 33081407 2.0E-06 ATTTACCGGAAAG 13
V_PITX2_Q2_M00482 TRANSFAC + 33076888 33076898 0.0E+00 TGTAATCCCAA 11
V_ZABC1_01_M01306 TRANSFAC + 33081040 33081047 1.0E-05 ATTCCAAC 8
V_CEBPB_Q6_M01896 TRANSFAC - 33076196 33076205 7.0E-06 TTATGCAATG 10
V_CHX10_01_M00437 TRANSFAC + 33076254 33076267 9.0E-06 AGATAATTAGACTG 14
V_IRF1_Q6_01_M01881 TRANSFAC - 33080783 33080796 8.0E-06 AAGTTTCATTTCTC 14
V_P63_01_M01656 TRANSFAC + 33080704 33080723 3.0E-06 TTTCAAGTCAGAACTTGTTA 20
V_TCFAP2A_03_M02819 TRANSFAC + 33081358 33081372 2.0E-06 TAACCCCGAGGGAAA 15
V_FOXJ2_01_M00422 TRANSFAC + 33081212 33081229 1.0E-06 CCATATATAAATAAAGAA 18
V_RFX3_05_M02892 TRANSFAC - 33080946 33080968 8.0E-06 TCTTATACATGGTAACAAAAACA 23
V_YY1_01_M00059 TRANSFAC + 33081207 33081223 9.0E-06 TCCATCCATATATAAAT 17
V_HNF3B_Q6_M02014 TRANSFAC + 33080721 33080729 1.0E-05 TTATTTGCT 9
V_RFX3_04_M02788 TRANSFAC - 33080946 33080968 8.0E-06 TCTTATACATGGTAACAAAAACA 23
V_PIT1_Q6_M00802 TRANSFAC + 33081209 33081226 4.0E-06 CATCCATATATAAATAAA 18
V_ELF5_04_M02241 TRANSFAC - 33081568 33081576 4.0E-06 TACTTCCTT 9
V_CEBP_Q2_01_M00912 TRANSFAC + 33076197 33076208 8.0E-06 ATTGCATAAGCT 12
V_CMAF_01_M01070 TRANSFAC - 33081425 33081443 9.0E-06 TAGATTGCTGATACATGGA 19
V_ZFP128_04_M02932 TRANSFAC - 33081213 33081226 6.0E-06 TTTATTTATATATG 14
V_ELK1_03_M01163 TRANSFAC - 33076695 33076705 1.0E-05 AAGCGGAAGTG 11
V_TCF3_05_M02920 TRANSFAC + 33081210 33081224 9.0E-06 ATCCATATATAAATA 15
V_GLIS2_04_M02863 TRANSFAC + 33081215 33081228 0.0E+00 TATATAAATAAAGA 14
V_FOXK1_03_M02752 TRANSFAC + 33081213 33081229 1.0E-06 CATATATAAATAAAGAA 17
V_PAX2_02_M00486 TRANSFAC - 33076802 33076810 5.0E-06 CATAAACTC 9
V_HOXA4_Q2_M00640 TRANSFAC + 33076256 33076263 5.0E-06 ATAATTAG 8
V_SPI1_02_M02043 TRANSFAC + 33081567 33081576 3.0E-06 AAAGGAAGTA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL