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BBS7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55212 Bardet-Biedl syndrome 7 chr4 - 122791152 - 122796652 122791652 Transcription Factor Binding Sites   Download all TFBS in the BBS7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX - 122791846 122791861 8.0E-06 AAAGAAGTCCAGTATT 16 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 122794900 122794911 7.0E-06 TCACAGCTGTCT 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 122794961 122794978 7.0E-06 CTGGGTCACTATGGGTCA 18 ESR2_MA0258.1 JASPAR - 122791908 122791925 5.0E-06 CAATGTCAGAGTGAAATC 18 SOX9_HMG_full_dimeric_17_3 SELEX - 122794998 122795014 9.0E-06 GATGAAAGTGAGTCAAA 17 TBX19_TBX_DBD_dimeric_20_1 SELEX + 122794861 122794880 2.0E-06 AATCACAACTTAGTGTTATG 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 122794861 122794880 2.0E-06 CATAACACTAAGTTGTGATT 20 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 122794961 122794978 3.0E-06 CTGGGTCACTATGGGTCA 18 SOX9_HMG_DBD_monomeric_9_1 SELEX - 122794813 122794821 9.0E-06 AAACAATGG 9 EBF1_MA0154.1 JASPAR - 122791419 122791428 1.0E-06 ACCCAAGGGA 10 IRF5_IRF_full_monomeric_11_1 SELEX - 122794816 122794826 9.0E-06 TACCGAAACAA 11 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 122791437 122791445 8.0E-06 AGATAATCC 9 JDP2_bZIP_full_dimeric_12_1 SELEX - 122791644 122791655 1.0E-05 ACTGACGTCACG 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 122794900 122794911 7.0E-06 AGACAGCTGTGA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 122794900 122794911 8.0E-06 TCACAGCTGTCT 12 RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 122795090 122795098 8.0E-06 AAACCACAA 9 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 122794961 122794977 1.0E-06 TGGGTCACTATGGGTCA 17 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 122794961 122794977 3.0E-06 TGGGTCACTATGGGTCA 17 SOX14_HMG_DBD_dimeric_12_1 SELEX + 122791914 122791925 8.0E-06 ACTCTGACATTG 12 T_TBX_full_dimeric_16_1 SELEX + 122794863 122794878 2.0E-06 TCACAACTTAGTGTTA 16 T_TBX_full_dimeric_16_1 SELEX - 122794863 122794878 1.0E-06 TAACACTAAGTTGTGA 16 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 122792009 122792019 5.0E-06 TCTTGTAAATA 11 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 122794900 122794911 7.0E-06 AGACAGCTGTGA 12 Sox3_HMG_DBD_dimeric_17_3 SELEX - 122794998 122795014 9.0E-06 GATGAAAGTGAGTCAAA 17 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 122794832 122794849 2.0E-06 AGTGCAAATGTCAGCAGA 18 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 122794832 122794849 1.0E-06 TCTGCTGACATTTGCACT 18 SOX9_MA0077.1 JASPAR - 122794813 122794821 2.0E-06 AAACAATGG 9 RUNX1_MA0002.2 JASPAR + 122795088 122795098 3.0E-06 TCTTGTGGTTT 11 FOXB1_forkhead_full_monomeric_9_1 SELEX - 122792008 122792016 4.0E-06 TGTAAATAA 9 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 122791436 122791446 6.0E-06 CAGATAATCCA 11 DPRX_homeodomain_DBD_monomeric_10_1 SELEX - 122791438 122791447 6.0E-06 ATGGATTATC 10 V_DMRT4_01_M01149 TRANSFAC + 122794884 122794896 9.0E-06 ATAGTTTCAAAAT 13 V_FOXP1_01_M00987 TRANSFAC + 122795084 122795103 6.0E-06 TGATTCTTGTGGTTTTTCTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC + 122790983 122790993 6.0E-06 TGCCCCCGGCC 11 V_XFD1_01_M00267 TRANSFAC - 122792005 122792018 2.0E-06 CTTGTAAATAAGTC 14 V_DMRT3_01_M01148 TRANSFAC - 122794882 122794896 5.0E-06 ATTTTGAAACTATTT 15 V_EVI1_04_M00081 TRANSFAC + 122791874 122791888 1.0E-06 AGAAAAAACTAGATA 15 V_BCL6_01_M01183 TRANSFAC + 122795089 122795104 3.0E-06 CTTGTGGTTTTTCTTT 16 V_AML3_Q6_M01856 TRANSFAC - 122795090 122795097 1.0E-05 AACCACAA 8 V_MMEF2_Q6_M00405 TRANSFAC + 122791449 122791464 1.0E-05 CGGTTTAAAATCAGAT 16 V_AR_Q6_01_M01996 TRANSFAC - 122791503 122791517 8.0E-06 GTCCCTCCTGTTCTT 15 V_DR4_Q2_M00965 TRANSFAC + 122794961 122794977 2.0E-06 TGACCCATAGTGACCCA 17 V_FOXO3A_Q1_M01137 TRANSFAC - 122792005 122792016 5.0E-06 TGTAAATAAGTC 12 V_AP2_Q6_01_M00915 TRANSFAC + 122791527 122791539 9.0E-06 GGGCCCGCAGGCC 13 V_LDSPOLYA_B_M00317 TRANSFAC + 122795089 122795104 8.0E-06 CTTGTGGTTTTTCTTT 16 V_TAL1_GATA1_01_M02243 TRANSFAC + 122795046 122795063 2.0E-06 TGGGGAAATACAGATAAG 18 V_E2_Q6_M00181 TRANSFAC - 122791952 122791967 3.0E-06 GCACCTATAACGGTGG 16 V_GC_01_M00255 TRANSFAC - 122791707 122791720 9.0E-06 AGTGGGCGGTGCTT 14 V_MEIS2_01_M01488 TRANSFAC + 122794983 122794998 1.0E-05 TAAGAGCTGACATTCT 16 V_TGIF_02_M01346 TRANSFAC - 122794983 122794999 6.0E-06 AAGAATGTCAGCTCTTA 17 V_RUNX1_01_M02257 TRANSFAC + 122795088 122795098 3.0E-06 TCTTGTGGTTT 11 V_HIC1_03_M01073 TRANSFAC + 122791553 122791570 8.0E-06 GAAGGCTGCCCGCGCCCC 18 V_AML2_01_M01759 TRANSFAC - 122795090 122795097 1.0E-05 AACCACAA 8 V_EVI1_01_M00078 TRANSFAC + 122791874 122791889 4.0E-06 AGAAAAAACTAGATAA 16 V_EVI1_01_M00078 TRANSFAC + 122795057 122795072 5.0E-06 AGATAAGTTCAGATAC 16 V_AP2BETA_Q3_M01858 TRANSFAC - 122791108 122791123 3.0E-06 GTGGCTGCCTGAGGGC 16 V_LXR_DR4_Q3_M00766 TRANSFAC + 122794961 122794976 0.0E+00 TGACCCATAGTGACCC 16 V_CREBATF_Q6_M00981 TRANSFAC + 122791645 122791653 9.0E-06 GTGACGTCA 9 V_OCT1_04_M00138 TRANSFAC + 122794870 122794892 1.0E-06 TTAGTGTTATGAAAATAGTTTCA 23 Tal1_Gata1_MA0140.1 JASPAR + 122795046 122795063 2.0E-06 TGGGGAAATACAGATAAG 18 V_EBF1_01_M02267 TRANSFAC - 122791419 122791428 1.0E-06 ACCCAAGGGA 10 V_CREB_Q2_01_M00916 TRANSFAC + 122791644 122791657 5.0E-06 CGTGACGTCAGTAC 14 V_BRACH_01_M00150 TRANSFAC - 122794859 122794882 2.0E-06 TTCATAACACTAAGTTGTGATTTG 24 V_TGIF1_01_M03111 TRANSFAC - 122794983 122794999 6.0E-06 AAGAATGTCAGCTCTTA 17 V_SOX11_03_M02795 TRANSFAC + 122791746 122791762 1.0E-05 AGAGGAACAAAAGAGGC 17 V_OCT1_B_M00342 TRANSFAC + 122794877 122794886 9.0E-06 TATGAAAATA 10 V_EVI1_06_M00011 TRANSFAC + 122791881 122791889 7.0E-06 ACTAGATAA 9 V_CREM_Q6_M01820 TRANSFAC + 122791646 122791656 2.0E-06 TGACGTCAGTA 11 V_MYOD_Q6_02_M02100 TRANSFAC - 122794900 122794908 8.0E-06 CAGCTGTCT 9 V_CREBP1_Q2_M00179 TRANSFAC + 122791644 122791655 3.0E-06 CGTGACGTCAGT 12 V_GFI1B_01_M01058 TRANSFAC + 122794859 122794870 7.0E-06 CAAATCACAACT 12 V_E2_Q6_01_M00928 TRANSFAC + 122791951 122791966 3.0E-06 TCCACCGTTATAGGTG 16 V_DMRT2_01_M01147 TRANSFAC - 122794882 122794897 4.0E-06 AATTTTGAAACTATTT 16 V_RFX3_05_M02892 TRANSFAC + 122794959 122794981 4.0E-06 ACTGACCCATAGTGACCCAGGAT 23 V_GATA6_04_M02757 TRANSFAC + 122791879 122791895 9.0E-06 AAACTAGATAAGCCTGC 17 V_TAACC_B_M00331 TRANSFAC - 122795088 122795110 5.0E-06 AAAGAAAAAGAAAAACCACAAGA 23 V_DMRT5_01_M01150 TRANSFAC - 122794881 122794895 2.0E-06 TTTTGAAACTATTTT 15 V_ESR2_01_M02377 TRANSFAC - 122791908 122791925 5.0E-06 CAATGTCAGAGTGAAATC 18 V_OCT4_01_M01125 TRANSFAC + 122794871 122794885 3.0E-06 TAGTGTTATGAAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.