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RPRD1A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55197 regulation of nuclear pre-mRNA domain containing 1A chr18 - 33646873 - 33652373 33647373 Transcription Factor Binding Sites   Download all TFBS in the RPRD1A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYBL2_MYB_DBD_dimeric_16_1 SELEX - 33646308 33646323 2.0E-06 AAGGTTTTAACCGTTA 16 MYBL2_MYB_DBD_dimeric_16_1 SELEX + 33646310 33646325 1.0E-06 ACGGTTAAAACCTTTA 16 IRF7_IRF_DBD_dimeric_14_1 SELEX + 33646115 33646128 8.0E-06 CATAAACTGAAAAA 14 TBR1_TBX_DBD_monomeric_10_1 SELEX - 33646322 33646331 7.0E-06 AAGTGTTAAA 10 FOXF2_MA0030.1 JASPAR - 33647259 33647272 3.0E-06 CCACCGTAAACACT 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 33647811 33647821 8.0E-06 TCATGCAAATA 11 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 33647537 33647548 5.0E-06 AGTGACGTCACA 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 33647537 33647548 6.0E-06 TGTGACGTCACT 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 33646301 33646316 9.0E-06 TAACCGTTATTAATCA 16 JDP2_bZIP_full_dimeric_12_1 SELEX + 33647537 33647548 8.0E-06 AGTGACGTCACA 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 33647537 33647548 9.0E-06 TGTGACGTCACT 12 RUNX3_RUNX_full_monomeric_10_1 SELEX + 33646174 33646183 2.0E-06 TAACCACAAA 10 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 33646174 33646182 1.0E-05 TAACCACAA 9 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 33646174 33646189 7.0E-06 TAACCACAAACAATAT 16 MYBL2_MYB_DBD_monomeric_11_1 SELEX - 33646307 33646317 1.0E-06 TTAACCGTTAT 11 ONECUT1_CUT_full_monomeric_14_1 SELEX + 33646135 33646148 9.0E-06 TGTAAATCAATTTC 14 ELF3_ETS_full_monomeric_13_1 SELEX + 33646821 33646833 7.0E-06 ATGACGGAAGTAA 13 PAX3_PAX_DBD_dimeric_10_1 SELEX + 33646138 33646147 6.0E-06 AAATCAATTT 10 PAX3_PAX_DBD_dimeric_10_1 SELEX - 33646138 33646147 6.0E-06 AAATTGATTT 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 33647536 33647549 4.0E-06 CTGTGACGTCACTG 14 CREB3_bZIP_full_dimeric_14_1 SELEX + 33647536 33647549 2.0E-06 CAGTGACGTCACAG 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 33647536 33647549 4.0E-06 CTGTGACGTCACTG 14 MYBL1_MYB_DBD_dimeric_17_1 SELEX - 33646308 33646324 1.0E-06 AAAGGTTTTAACCGTTA 17 MYBL1_MYB_DBD_dimeric_17_1 SELEX + 33646309 33646325 8.0E-06 AACGGTTAAAACCTTTA 17 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 33646101 33646115 8.0E-06 CACACATACTTACAC 15 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 33647685 33647700 2.0E-06 CTCCCACCATGCCTCT 16 Pou5f1_MA0142.1 JASPAR - 33647812 33647826 2.0E-06 ATTGGTCATGCAAAT 15 SOX21_HMG_DBD_dimeric_16_1 SELEX + 33646369 33646384 9.0E-06 AATAATGAAGAGTGTC 16 MYBL1_MYB_DBD_monomeric_11_1 SELEX - 33646307 33646317 2.0E-06 TTAACCGTTAT 11 NR3C1_MA0113.1 JASPAR - 33646191 33646208 6.0E-06 GGAGACAATCTGTCCTTG 18 RUNX1_MA0002.2 JASPAR - 33646174 33646184 2.0E-06 GTTTGTGGTTA 11 Nobox_MA0125.1 JASPAR - 33647821 33647828 7.0E-06 TAATTGGT 8 E2F2_E2F_DBD_dimeric_18_1 SELEX - 33646224 33646241 2.0E-06 AAAATGTGAGCCAAAATG 18 PAX7_PAX_full_dimeric_10_1 SELEX + 33646138 33646147 7.0E-06 AAATCAATTT 10 PAX7_PAX_full_dimeric_10_1 SELEX - 33646138 33646147 1.0E-05 AAATTGATTT 10 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 33646163 33646176 5.0E-06 TGACGTTTTCATAA 14 V_SPI1_01_M01203 TRANSFAC + 33646819 33646835 1.0E-05 AAATGACGGAAGTAACT 17 V_DBX1_01_M01483 TRANSFAC - 33646294 33646310 8.0E-06 TTATTAATCAAAATAGA 17 V_FREAC7_01_M00293 TRANSFAC + 33646174 33646189 5.0E-06 TAACCACAAACAATAT 16 V_ATF_01_M00017 TRANSFAC - 33647536 33647549 2.0E-06 CTGTGACGTCACTG 14 V_OSF2_Q6_M00731 TRANSFAC + 33646176 33646183 1.0E-05 ACCACAAA 8 V_BACH2_01_M00490 TRANSFAC - 33647207 33647217 9.0E-06 GGTGAGTCAAC 11 V_RHOX11_01_M01347 TRANSFAC + 33646128 33646144 4.0E-06 ACAAGGCTGTAAATCAA 17 V_HMGIY_Q3_M01010 TRANSFAC + 33646138 33646152 5.0E-06 AAATCAATTTCTTCT 15 V_DEAF1_02_M01002 TRANSFAC - 33646810 33646834 9.0E-06 GTTACTTCCGTCATTTCTGTAACGC 25 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 33647779 33647790 3.0E-06 AATTTATACCAG 12 V_AML3_Q6_M01856 TRANSFAC + 33646175 33646182 1.0E-05 AACCACAA 8 V_POU5F1_02_M02245 TRANSFAC - 33647812 33647826 2.0E-06 ATTGGTCATGCAAAT 15 V_SATB1_Q3_M01723 TRANSFAC + 33646303 33646318 1.0E-05 ATTAATAACGGTTAAA 16 V_SOX5_01_M00042 TRANSFAC + 33646180 33646189 7.0E-06 CAAACAATAT 10 V_SP1_Q6_01_M00931 TRANSFAC - 33647558 33647567 4.0E-06 GGGGCGGGGC 10 V_CREB_Q4_01_M00917 TRANSFAC + 33647536 33647546 7.0E-06 CAGTGACGTCA 11 V_CREB_Q4_01_M00917 TRANSFAC - 33647539 33647549 7.0E-06 CTGTGACGTCA 11 V_ZTA_Q2_M00711 TRANSFAC - 33647277 33647289 9.0E-06 TCCCTGTGGCTCA 13 V_YY1_Q6_M00793 TRANSFAC - 33647517 33647525 7.0E-06 GCCATCTTG 9 V_MYB_05_M02779 TRANSFAC + 33646304 33646320 2.0E-06 TTAATAACGGTTAAAAC 17 V_MYB_05_M02779 TRANSFAC - 33646304 33646320 0.0E+00 GTTTTAACCGTTATTAA 17 V_JUNDM2_03_M02772 TRANSFAC + 33647535 33647550 9.0E-06 GCAGTGACGTCACAGG 16 V_JUNDM2_03_M02772 TRANSFAC - 33647535 33647550 3.0E-06 CCTGTGACGTCACTGC 16 V_GKLF_02_M01588 TRANSFAC + 33647454 33647465 8.0E-06 ACCCCACCCTTC 12 V_LHX3_01_M01471 TRANSFAC - 33646295 33646311 2.0E-06 GTTATTAATCAAAATAG 17 V_NR3C1_01_M02219 TRANSFAC - 33646191 33646208 6.0E-06 GGAGACAATCTGTCCTTG 18 V_TCFAP2E_04_M02926 TRANSFAC + 33646327 33646340 4.0E-06 CACTTGATAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC - 33647831 33647840 1.0E-06 TATTTTTAAC 10 V_RHOX11_02_M01384 TRANSFAC + 33646128 33646144 4.0E-06 ACAAGGCTGTAAATCAA 17 V_SOX13_03_M02797 TRANSFAC + 33646361 33646376 3.0E-06 TTTGCAACAATAATGA 16 V_GC_01_M00255 TRANSFAC - 33647556 33647569 6.0E-06 GAGGGGCGGGGCGT 14 V_GC_01_M00255 TRANSFAC + 33647622 33647635 3.0E-06 AAGGGGCGGAGTCG 14 V_RUNX1_01_M02257 TRANSFAC - 33646174 33646184 2.0E-06 GTTTGTGGTTA 11 V_AML2_01_M01759 TRANSFAC + 33646175 33646182 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC + 33647443 33647456 6.0E-06 CTCGCCCCCTCACC 14 V_SP1_Q6_M00196 TRANSFAC - 33647557 33647569 2.0E-06 GAGGGGCGGGGCG 13 V_MYBL1_03_M02780 TRANSFAC + 33646304 33646320 1.0E-06 TTAATAACGGTTAAAAC 17 V_MYBL1_03_M02780 TRANSFAC - 33646304 33646320 0.0E+00 GTTTTAACCGTTATTAA 17 V_HNF1_Q6_01_M01011 TRANSFAC + 33647827 33647847 3.0E-06 TACGGTTAAAAATACACCTTC 21 V_SREBP_Q6_M01168 TRANSFAC + 33647448 33647462 6.0E-06 CCCCTCACCCCACCC 15 V_SOX18_03_M02801 TRANSFAC - 33646360 33646375 4.0E-06 CATTATTGTTGCAAAC 16 V_PBX1_01_M00096 TRANSFAC - 33646300 33646308 4.0E-06 ATTAATCAA 9 V_CREBATF_Q6_M00981 TRANSFAC + 33647538 33647546 9.0E-06 GTGACGTCA 9 V_CREBATF_Q6_M00981 TRANSFAC - 33647539 33647547 9.0E-06 GTGACGTCA 9 V_REX1_03_M01744 TRANSFAC + 33647518 33647529 8.0E-06 AAGATGGCGTCC 12 V_GR_Q6_M00192 TRANSFAC - 33646191 33646209 0.0E+00 TGGAGACAATCTGTCCTTG 19 V_MEF2_04_M00233 TRANSFAC - 33646290 33646311 4.0E-06 GTTATTAATCAAAATAGACGCT 22 V_PEBP_Q6_M00984 TRANSFAC + 33646172 33646186 7.0E-06 CATAACCACAAACAA 15 V_ATF3_Q6_M00513 TRANSFAC - 33647536 33647549 1.0E-06 CTGTGACGTCACTG 14 V_ARID3A_04_M02735 TRANSFAC - 33646295 33646311 0.0E+00 GTTATTAATCAAAATAG 17 V_ARID3A_04_M02735 TRANSFAC + 33646296 33646312 5.0E-06 TATTTTGATTAATAACG 17 V_OCT1_B_M00342 TRANSFAC - 33647811 33647820 3.0E-06 CATGCAAATA 10 V_FOXO1_Q5_M01216 TRANSFAC + 33646124 33646132 8.0E-06 AAAAACAAG 9 V_GR_Q6_02_M01836 TRANSFAC - 33646191 33646203 4.0E-06 CAATCTGTCCTTG 13 V_SP4_Q5_M01273 TRANSFAC + 33647558 33647568 8.0E-06 GCCCCGCCCCT 11 V_FREAC2_01_M00290 TRANSFAC - 33647257 33647272 3.0E-06 CCACCGTAAACACTCG 16 V_HBP1_04_M02866 TRANSFAC + 33646202 33646218 6.0E-06 TGTCTCCATTATATACA 17 V_CREM_Q6_M01820 TRANSFAC - 33647536 33647546 3.0E-06 TGACGTCACTG 11 V_YY1_03_M02044 TRANSFAC - 33647517 33647528 2.0E-06 GACGCCATCTTG 12 V_VJUN_01_M00036 TRANSFAC - 33647535 33647550 2.0E-06 CCTGTGACGTCACTGC 16 V_GFI1_Q6_M01067 TRANSFAC - 33647744 33647756 9.0E-06 TGTAATCACTGCT 13 V_ATF1_Q6_M00691 TRANSFAC - 33647539 33647549 2.0E-06 CTGTGACGTCA 11 V_ZFP187_04_M02934 TRANSFAC - 33647283 33647298 2.0E-06 CAGACCTTGTCCCTGT 16 V_TBP_01_M00471 TRANSFAC + 33647783 33647790 8.0E-06 TATAAATT 8 V_POU5F1_01_M01307 TRANSFAC - 33647811 33647820 6.0E-06 CATGCAAATA 10 V_CREBP1_Q2_M00179 TRANSFAC + 33647537 33647548 3.0E-06 AGTGACGTCACA 12 V_EHF_06_M02745 TRANSFAC + 33646819 33646833 7.0E-06 AAATGACGGAAGTAA 15 V_AREB6_02_M00413 TRANSFAC + 33647211 33647222 1.0E-05 ACTCACCTTTCC 12 V_MSX2_01_M01393 TRANSFAC + 33647817 33647833 5.0E-06 CATGACCAATTACGGTT 17 V_ATF1_03_M02738 TRANSFAC + 33647535 33647550 2.0E-06 GCAGTGACGTCACAGG 16 V_ATF1_03_M02738 TRANSFAC - 33647535 33647550 3.0E-06 CCTGTGACGTCACTGC 16 V_RHOX11_05_M03099 TRANSFAC + 33646128 33646144 4.0E-06 ACAAGGCTGTAAATCAA 17 V_MSX1_01_M00394 TRANSFAC - 33647823 33647831 7.0E-06 CCGTAATTG 9 V_ASCL2_04_M02841 TRANSFAC + 33647451 33647466 8.0E-06 CTCACCCCACCCTTCC 16 V_SRF_06_M02916 TRANSFAC + 33646329 33646345 7.0E-06 CTTGATAAAAAACCATC 17 V_FOXJ2_01_M00422 TRANSFAC + 33646173 33646190 4.0E-06 ATAACCACAAACAATATA 18 V_SOX12_03_M02796 TRANSFAC - 33646360 33646373 4.0E-06 TTATTGTTGCAAAC 14 V_PIT1_Q6_M00802 TRANSFAC - 33646362 33646379 1.0E-06 TCTTCATTATTGTTGCAA 18 V_MEF2_01_M00006 TRANSFAC + 33647830 33647845 4.0E-06 GGTTAAAAATACACCT 16 V_GMEB1_04_M02865 TRANSFAC + 33646159 33646174 1.0E-05 TGGGTGACGTTTTCAT 16 V_SP1_Q2_01_M00933 TRANSFAC + 33647559 33647568 7.0E-06 CCCCGCCCCT 10 V_HMEF2_Q6_M00406 TRANSFAC + 33647830 33647845 1.0E-06 GGTTAAAAATACACCT 16 V_LHX5_01_M01353 TRANSFAC - 33646295 33646311 7.0E-06 GTTATTAATCAAAATAG 17 V_SOX5_07_M02909 TRANSFAC - 33646135 33646151 8.0E-06 GAAGAAATTGATTTACA 17 V_ZFP128_04_M02932 TRANSFAC - 33647831 33647844 1.0E-05 GGTGTATTTTTAAC 14 V_SP1_Q4_01_M00932 TRANSFAC - 33647557 33647569 4.0E-06 GAGGGGCGGGGCG 13 V_SREBP1_Q5_M01173 TRANSFAC + 33647448 33647462 2.0E-06 CCCCTCACCCCACCC 15 V_ATF_B_M00338 TRANSFAC - 33647536 33647547 4.0E-06 GTGACGTCACTG 12 V_PBX1_04_M01357 TRANSFAC - 33646294 33646310 2.0E-06 TTATTAATCAAAATAGA 17 V_RHOX11_06_M03100 TRANSFAC + 33646128 33646144 4.0E-06 ACAAGGCTGTAAATCAA 17 V_AP2_Q3_M00800 TRANSFAC + 33647610 33647625 8.0E-06 ACCGCCAGGCGGAAGG 16 V_OCT4_01_M01125 TRANSFAC - 33647812 33647826 2.0E-06 ATTGGTCATGCAAAT 15

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