Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NUDT11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55190 nudix (nucleoside diphosphate linked moiety X)-type motif 11 chrX - 51238959 - 51244459 51239459 Transcription Factor Binding Sites   Download all TFBS in the NUDT11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX + 51237418 51237433 1.0E-06 AAAATATTTCAGTGTT 16 Zfp423_MA0116.1 JASPAR + 51239808 51239822 6.0E-06 GCACCCCTGGGGGCC 15 Zfp423_MA0116.1 JASPAR - 51239808 51239822 1.0E-06 GGCCCCCAGGGGTGC 15 SOX8_HMG_DBD_dimeric_16_1 SELEX + 51237418 51237433 5.0E-06 AAAATATTTCAGTGTT 16 SOX8_HMG_full_dimeric_15_1 SELEX + 51237419 51237433 1.0E-06 AAATATTTCAGTGTT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX + 51237419 51237433 5.0E-06 AAATATTTCAGTGTT 15 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 51240139 51240151 5.0E-06 CTTCAACAGGTTC 13 SP1_MA0079.2 JASPAR - 51239745 51239754 7.0E-06 CCCCGCCCCC 10 SOX7_HMG_full_dimeric_17_1 SELEX + 51237418 51237434 2.0E-06 AAAATATTTCAGTGTTT 17 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 51240139 51240153 8.0E-06 CTTCAACAGGTTCCC 15 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 51239974 51239987 6.0E-06 TTTACACACGACAG 14 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 51240117 51240126 8.0E-06 GTCACATGAT 10 Sox11_HMG_DBD_dimeric_15_1 SELEX + 51237419 51237433 1.0E-06 AAATATTTCAGTGTT 15 RUNX1_MA0002.2 JASPAR + 51237758 51237768 8.0E-06 TCCTGTGGTTA 11 Sox3_HMG_DBD_dimeric_17_1 SELEX + 51237418 51237434 6.0E-06 AAAATATTTCAGTGTTT 17 NFE2L2_MA0150.1 JASPAR - 51240111 51240121 1.0E-06 GTGACTCAGCA 11 SOX9_HMG_full_dimeric_17_1 SELEX + 51237418 51237434 0.0E+00 AAAATATTTCAGTGTTT 17 V_XVENT1_01_M00445 TRANSFAC - 51238764 51238776 2.0E-06 CTTCTATTTGTCT 13 V_DEC2_Q2_M01843 TRANSFAC + 51239710 51239719 1.0E-06 GTTCACGTGC 10 V_AML_Q6_M00769 TRANSFAC + 51237756 51237770 7.0E-06 ATTCCTGTGGTTACT 15 V_HMGIY_Q3_M01010 TRANSFAC - 51237744 51237758 1.0E-05 AATGGAATCTTTTAT 15 V_HOXA13_02_M01297 TRANSFAC - 51240130 51240138 1.0E-06 AAATAAAAC 9 V_SP1_03_M02281 TRANSFAC - 51239745 51239754 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 51239479 51239490 5.0E-06 GCCCCGCCCAGC 12 V_SP1_02_M01303 TRANSFAC + 51239740 51239750 8.0E-06 GGGGCGGGGGC 11 V_CDX_Q5_M00991 TRANSFAC - 51240132 51240149 1.0E-05 ACCTGTTGAAGAAATAAA 18 V_WT1_Q6_01_M02036 TRANSFAC - 51239742 51239751 4.0E-06 CGCCCCCGCC 10 V_SREBP1_01_M00220 TRANSFAC - 51240117 51240127 1.0E-05 CATCATGTGAC 11 V_RUNX1_01_M02257 TRANSFAC + 51237758 51237768 8.0E-06 TCCTGTGGTTA 11 V_KROX_Q6_M00982 TRANSFAC - 51239740 51239753 0.0E+00 CCCGCCCCCGCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 51240011 51240020 2.0E-06 TCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC + 51239738 51239750 9.0E-06 GAGGGGCGGGGGC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 51239642 51239655 3.0E-06 GGCGGAGGGAGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 51239935 51239948 6.0E-06 CGCGGTGGGGAGGG 14 V_EGR1_Q6_M01873 TRANSFAC + 51239743 51239752 4.0E-06 GCGGGGGCGG 10 V_TATA_C_M00216 TRANSFAC + 51237741 51237750 9.0E-06 ACCATAAAAG 10 V_ISRE_01_M00258 TRANSFAC + 51240128 51240142 1.0E-05 CAGTTTTATTTCTTC 15 V_IRF3_06_M02871 TRANSFAC + 51239397 51239410 1.0E-06 AGAGAAAGGGCCGA 14 V_PEBP_Q6_M00984 TRANSFAC - 51237756 51237770 4.0E-06 AGTAACCACAGGAAT 15 V_HB24_01_M01399 TRANSFAC - 51237802 51237816 7.0E-06 CCATATTTGAATGTA 15 V_MAFK_Q3_M02022 TRANSFAC - 51240110 51240120 2.0E-06 TGACTCAGCAA 11 V_SMAD4_Q6_M00733 TRANSFAC + 51238757 51238771 9.0E-06 GCGAGGCAGACAAAT 15 V_STAT3_03_M01595 TRANSFAC + 51239387 51239402 7.0E-06 GGTGCTGGGAAGAGAA 16 V_MAF_Q6_01_M00983 TRANSFAC + 51240111 51240121 7.0E-06 TGCTGAGTCAC 11 V_SP4_Q5_M01273 TRANSFAC - 51239745 51239755 5.0E-06 CCCCCGCCCCC 11 V_TFEB_01_M01768 TRANSFAC + 51240117 51240126 7.0E-06 GTCACATGAT 10 V_TFEB_01_M01768 TRANSFAC - 51240117 51240126 7.0E-06 ATCATGTGAC 10 V_ZFP206_01_M01742 TRANSFAC + 51239794 51239804 1.0E-06 TGCGCAGGCGC 11 V_FPM315_01_M01587 TRANSFAC - 51238697 51238708 2.0E-06 CGGGGAGGAGGG 12 V_NRF2_Q4_M00821 TRANSFAC + 51240110 51240122 3.0E-06 TTGCTGAGTCACA 13 V_OCT1_06_M00162 TRANSFAC - 51237802 51237815 5.0E-06 CATATTTGAATGTA 14 V_SMAD3_Q6_M00701 TRANSFAC - 51238760 51238768 1.0E-05 TGTCTGCCT 9 V_NFE2_01_M00037 TRANSFAC + 51240111 51240121 0.0E+00 TGCTGAGTCAC 11 V_SP1_Q2_01_M00933 TRANSFAC - 51239415 51239424 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 51239739 51239748 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 51239745 51239754 4.0E-06 CCCCGCCCCC 10 V_NFE2L2_01_M02263 TRANSFAC - 51240111 51240121 1.0E-06 GTGACTCAGCA 11 V_TFE_Q6_M01029 TRANSFAC - 51240118 51240125 1.0E-05 TCATGTGA 8 V_MAFK_04_M02880 TRANSFAC - 51240123 51240137 7.0E-06 AATAAAACTGCATCA 15 V_TCF11MAFG_01_M00284 TRANSFAC - 51240105 51240126 0.0E+00 ATCATGTGACTCAGCAAGGATG 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.