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RIF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55183 RAP1 interacting factor homolog (yeast) chr2 + 152261396 - 152267103 152266603 Transcription Factor Binding Sites   Download all TFBS in the RIF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR - 152266453 152266464 9.0E-06 TGTTTACTCACG 12 Sox1_HMG_DBD_dimeric_14_1 SELEX + 152265500 152265513 1.0E-06 TGAATTACAATGCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 152265500 152265513 1.0E-05 TGCATTGTAATTCA 14 FOXA1_MA0148.1 JASPAR - 152266454 152266464 5.0E-06 TGTTTACTCAC 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 152265393 152265409 1.0E-05 AGAAACGTCAGTAAACA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 152262151 152262162 1.0E-05 AATACAAACATT 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 152265564 152265575 6.0E-06 GTACATAACAAT 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 152266265 152266278 8.0E-06 CGTCACGCCCCTCT 14 SOX7_HMG_full_dimeric_17_2 SELEX - 152261970 152261986 8.0E-06 GATGAATTACTTTCCTG 17 SOX15_HMG_full_dimeric_15_3 SELEX - 152261971 152261985 4.0E-06 ATGAATTACTTTCCT 15 IRF5_IRF_full_monomeric_11_1 SELEX - 152267299 152267309 2.0E-06 AACCGAAACTT 11 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 152262153 152262166 8.0E-06 AGCTAATGTTTGTA 14 ZNF524_C2H2_full_dimeric_12_1 SELEX + 152265437 152265448 6.0E-06 ACCCTTCAACCC 12 GBX2_homeodomain_full_monomeric_10_1 SELEX + 152266196 152266205 8.0E-06 AGCAATTAAC 10 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 152266196 152266206 4.0E-06 AGCAATTAACT 11 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 152262153 152262166 6.0E-06 AGCTAATGTTTGTA 14 SOX8_HMG_full_dimeric_13_1 SELEX - 152261973 152261985 6.0E-06 ATGAATTACTTTC 13 SP1_MA0079.2 JASPAR - 152267182 152267191 7.0E-06 CCCCGCCCCC 10 FOXI1_MA0042.1 JASPAR - 152262152 152262163 4.0E-06 TAATGTTTGTAT 12 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 152261963 152261979 5.0E-06 TACTTTCCTGGATTTAC 17 TBX4_TBX_DBD_dimeric_20_1 SELEX - 152266038 152266057 9.0E-06 GGGCGCGGTGACTCACACCT 20 YY2_C2H2_full_monomeric_11_1 SELEX + 152266417 152266427 4.0E-06 GCCGCCATCTT 11 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 152265991 152266006 8.0E-06 GAGGTCAGGAGTTCGA 16 PRDM4_C2H2_full_monomeric_13_1 SELEX + 152266218 152266230 4.0E-06 TTTCAAGTCTCTC 13 ELK1_MA0028.1 JASPAR - 152266909 152266918 5.0E-06 GAACCGGAAG 10 Hltf_MA0109.1 JASPAR - 152267295 152267304 1.0E-05 AAACTTTTAA 10 Myf_MA0055.1 JASPAR - 152267222 152267233 4.0E-06 CAGCAGCAGCAG 12 SOX18_HMG_full_dimeric_15_3 SELEX - 152261971 152261985 6.0E-06 ATGAATTACTTTCCT 15 NR3C1_MA0113.1 JASPAR - 152266082 152266099 2.0E-06 AAGGAGATAACGTACTGT 18 Sox3_HMG_DBD_dimeric_17_3 SELEX - 152261970 152261986 5.0E-06 GATGAATTACTTTCCTG 17 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 152266196 152266206 5.0E-06 AGCAATTAACT 11 FOXO3_forkhead_full_dimeric_14_1 SELEX - 152262120 152262133 7.0E-06 TTCACCATGTTGAC 14 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 152265992 152266006 2.0E-06 GAGGTCAGGAGTTCG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 152266907 152266921 9.0E-06 CCCGAACCGGAAGAG 15 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 152266197 152266214 8.0E-06 GCAATTAACTCACATTTT 18 Sox2_MA0143.1 JASPAR + 152265562 152265576 2.0E-06 CCATTGTTATGTACG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 152262148 152262160 4.0E-06 AAAAATACAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 152262148 152262160 3.0E-06 AAAAATACAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 152265331 152265343 6.0E-06 AAAAAAAAAAAAA 13 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 152266196 152266206 2.0E-06 AGCAATTAACT 11 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 152265564 152265575 5.0E-06 GTACATAACAAT 12 V_RUSH1A_02_M01107 TRANSFAC - 152267295 152267304 1.0E-05 AAACTTTTAA 10 V_MEQ_01_M02049 TRANSFAC - 152267242 152267250 7.0E-06 AACACACAC 9 V_CDPCR1_01_M00104 TRANSFAC - 152266322 152266331 2.0E-06 TATCGATCGC 10 V_FREAC7_01_M00293 TRANSFAC + 152262149 152262164 6.0E-06 AAAATACAAACATTAG 16 V_TCF3_01_M01594 TRANSFAC - 152265333 152265345 5.0E-06 CCTTTTTTTTTTT 13 V_EBF_Q6_M00977 TRANSFAC - 152265407 152265417 1.0E-06 TTCCCTAGAGA 11 V_BCL6_01_M01183 TRANSFAC - 152261974 152261989 1.0E-06 TAAGATGAATTACTTT 16 V_IK_Q5_M01169 TRANSFAC + 152262065 152262074 3.0E-06 TTTGGGAGGC 10 V_IK_Q5_M01169 TRANSFAC - 152266014 152266023 3.0E-06 TTTGGGAGGC 10 V_IK_Q5_M01169 TRANSFAC + 152267104 152267113 5.0E-06 GTTGGGAGGG 10 V_GABP_B_M00341 TRANSFAC - 152266905 152266916 3.0E-06 ACCGGAAGAGGA 12 V_NKX25_Q6_M02108 TRANSFAC + 152262087 152262097 2.0E-06 ATCACTTGAAG 11 V_YY1_Q6_M00793 TRANSFAC + 152266420 152266428 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC - 152262148 152262165 5.0E-06 GCTAATGTTTGTATTTTT 18 V_FOXJ1_03_M02750 TRANSFAC - 152265387 152265402 3.0E-06 TCAGTAAACACAATGA 16 V_SP1_03_M02281 TRANSFAC - 152267182 152267191 7.0E-06 CCCCGCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 152262151 152262163 5.0E-06 TAATGTTTGTATT 13 V_PITX2_Q6_M02114 TRANSFAC + 152262051 152262060 1.0E-06 TGTAATCCCA 10 V_LYF1_01_M00141 TRANSFAC + 152262065 152262073 9.0E-06 TTTGGGAGG 9 V_LYF1_01_M00141 TRANSFAC - 152266015 152266023 9.0E-06 TTTGGGAGG 9 V_NR3C1_01_M02219 TRANSFAC - 152266082 152266099 2.0E-06 AAGGAGATAACGTACTGT 18 V_TCFAP2E_04_M02926 TRANSFAC + 152265326 152265339 1.0E-06 GTCTTAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 152265327 152265340 6.0E-06 TCTTAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 152265329 152265342 1.0E-06 TTAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 152265330 152265343 0.0E+00 TAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 152265331 152265344 4.0E-06 AAAAAAAAAAAAAG 14 V_DLX5_01_M01388 TRANSFAC + 152266194 152266209 9.0E-06 TGAGCAATTAACTCAC 16 V_OCT2_02_M01761 TRANSFAC + 152265358 152265367 1.0E-05 AGCATATTCA 10 V_OCT2_02_M01761 TRANSFAC - 152265358 152265367 6.0E-06 TGAATATGCT 10 V_PAX_Q6_M00808 TRANSFAC - 152267129 152267139 7.0E-06 CTAGAACTCAC 11 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 152265993 152266007 2.0E-06 TGAGGTCAGGAGTTC 15 V_BARBIE_01_M00238 TRANSFAC + 152265337 152265351 6.0E-06 AAAAAAAGGCGGGGG 15 V_BCL6_02_M01185 TRANSFAC - 152261966 152261979 1.0E-06 TACTTTCCTGGATT 14 V_RPC155_01_M01798 TRANSFAC - 152265987 152266002 0.0E+00 TCAGGAGTTCGAGACC 16 V_ELF4_04_M02850 TRANSFAC + 152265325 152265341 3.0E-06 CGTCTTAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 152265326 152265342 1.0E-06 GTCTTAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 152265327 152265343 0.0E+00 TCTTAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 152265328 152265344 2.0E-06 CTTAAAAAAAAAAAAAG 17 V_TST1_01_M00133 TRANSFAC + 152265498 152265512 4.0E-06 ACTGAATTACAATGC 15 V_MYF_01_M01302 TRANSFAC - 152267222 152267233 4.0E-06 CAGCAGCAGCAG 12 V_ZFP105_03_M02827 TRANSFAC + 152265327 152265341 9.0E-06 TCTTAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 152265328 152265342 1.0E-06 CTTAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 152265329 152265343 0.0E+00 TTAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 152265330 152265344 0.0E+00 TAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 152265331 152265345 2.0E-06 AAAAAAAAAAAAAGG 15 V_ZFP105_03_M02827 TRANSFAC + 152265332 152265346 9.0E-06 AAAAAAAAAAAAGGC 15 V_CART1_01_M00416 TRANSFAC + 152261975 152261992 8.0E-06 AAGTAATTCATCTTAGAA 18 V_SOX8_04_M02912 TRANSFAC - 152267117 152267130 8.0E-06 ACATTCATTCTACG 14 V_NKX61_01_M00424 TRANSFAC - 152265621 152265633 6.0E-06 CTTTTAATAGGTG 13 V_XFD3_01_M00269 TRANSFAC - 152265389 152265402 7.0E-06 TCAGTAAACACAAT 14 Hand1_Tcfe2a_MA0092.1 JASPAR - 152262104 152262113 9.0E-06 CGTCTGGAAT 10 V_AP1_Q4_M00188 TRANSFAC - 152266041 152266051 1.0E-05 GGTGACTCACA 11 V_HNF3A_01_M01261 TRANSFAC + 152266456 152266465 7.0E-06 GAGTAAACAG 10 V_HNF3_Q6_M00791 TRANSFAC + 152262150 152262162 1.0E-06 AAATACAAACATT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 152262150 152262160 3.0E-06 TGTTTGTATTT 11 V_NKX25_Q5_M01043 TRANSFAC + 152265613 152265622 6.0E-06 TCTCACTTCA 10 V_TATA_C_M00216 TRANSFAC - 152265638 152265647 3.0E-06 TCTATAAAAT 10 V_JUNDM2_04_M02876 TRANSFAC + 152266038 152266053 8.0E-06 AGGTGTGAGTCACCGC 16 V_YY1_Q6_02_M01035 TRANSFAC + 152266417 152266427 7.0E-06 GCCGCCATCTT 11 V_REX1_03_M01744 TRANSFAC - 152266416 152266427 1.0E-06 AAGATGGCGGCT 12 V_HMX1_02_M01481 TRANSFAC + 152266193 152266209 4.0E-06 CTGAGCAATTAACTCAC 17 V_GR_Q6_M00192 TRANSFAC + 152266165 152266183 9.0E-06 AGGGCCCACTATGTTCAGT 19 V_KLF7_03_M02773 TRANSFAC - 152265513 152265528 0.0E+00 TGGGCCCCGCCCATAT 16 V_TAXCREB_02_M00115 TRANSFAC + 152265544 152265558 3.0E-06 ATAACGAATATCCCC 15 V_HFH1_01_M00129 TRANSFAC - 152262152 152262163 2.0E-06 TAATGTTTGTAT 12 V_ATF1_04_M02842 TRANSFAC + 152265542 152265555 6.0E-06 TAATAACGAATATC 14 V_CTCF_01_M01200 TRANSFAC - 152266606 152266625 6.0E-06 CTCGCCGCGAGGGGGCGGAG 20 V_TFIII_Q6_M00706 TRANSFAC - 152266666 152266674 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC - 152267182 152267192 5.0E-06 CCCCCGCCCCC 11 V_HBP1_04_M02866 TRANSFAC + 152265631 152265647 7.0E-06 AAGCCCTATTTTATAGA 17 V_YY1_03_M02044 TRANSFAC + 152266417 152266428 1.0E-06 GCCGCCATCTTG 12 V_MYOD_01_M00001 TRANSFAC - 152266247 152266258 5.0E-06 CATCAGGTGGTG 12 V_MTF1_06_M02882 TRANSFAC + 152265327 152265340 5.0E-06 TCTTAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 152265330 152265343 4.0E-06 TAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 152265331 152265344 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 152265332 152265345 6.0E-06 AAAAAAAAAAAAGG 14 V_IRF5_03_M02769 TRANSFAC - 152267298 152267312 5.0E-06 TCCAACCGAAACTTT 15 V_OSR2_04_M02889 TRANSFAC + 152266098 152266113 1.0E-05 TTTTGCTAACTGATTT 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 152266600 152266608 8.0E-06 GAGGGTGGG 9 V_CAAT_C_M00200 TRANSFAC + 152265603 152265627 9.0E-06 TCCAACCTTTTCTCACTTCACCTAT 25 V_CAAT_C_M00200 TRANSFAC + 152266196 152266220 9.0E-06 AGCAATTAACTCACATTTTGAATTT 25 V_ESRRA_04_M02852 TRANSFAC + 152266943 152266959 1.0E-05 GGCCAGGGGTCAGAGCC 17 V_TCF7_04_M02921 TRANSFAC + 152265324 152265338 3.0E-06 CCGTCTTAAAAAAAA 15 V_SMAD3_03_M02794 TRANSFAC - 152266736 152266752 7.0E-06 CGACACCAGACACCTGA 17 V_BDP1_01_M01796 TRANSFAC + 152265987 152265998 2.0E-06 GGTCTCGAACTC 12 V_NRF2_01_M00108 TRANSFAC - 152266907 152266916 1.0E-06 ACCGGAAGAG 10 V_FPM315_01_M01587 TRANSFAC + 152265347 152265358 2.0E-06 GGGGGAGGAGCA 12 V_MTATA_B_M00320 TRANSFAC - 152265632 152265648 8.0E-06 CTCTATAAAATAGGGCT 17 V_FOXA2_03_M02260 TRANSFAC - 152266453 152266464 9.0E-06 TGTTTACTCACG 12 V_PITX2_Q2_M00482 TRANSFAC + 152262051 152262061 1.0E-06 TGTAATCCCAG 11 V_PITX2_Q2_M00482 TRANSFAC - 152266027 152266037 3.0E-06 TGTAATCCAAG 11 V_TBX5_Q5_M01044 TRANSFAC - 152266037 152266046 1.0E-06 CTCACACCTT 10 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 152265995 152266009 7.0E-06 TCTGAGGTCAGGAGT 15 V_SOX2_01_M02246 TRANSFAC + 152265562 152265576 2.0E-06 CCATTGTTATGTACG 15 V_SRF_06_M02916 TRANSFAC + 152265326 152265342 1.0E-06 GTCTTAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 152265327 152265343 0.0E+00 TCTTAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 152265328 152265344 0.0E+00 CTTAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 152265329 152265345 1.0E-06 TTAAAAAAAAAAAAAGG 17 V_SRF_06_M02916 TRANSFAC + 152265330 152265346 1.0E-06 TAAAAAAAAAAAAAGGC 17 V_SRF_06_M02916 TRANSFAC + 152265331 152265347 8.0E-06 AAAAAAAAAAAAAGGCG 17 V_HFH3_01_M00289 TRANSFAC - 152262151 152262163 4.0E-06 TAATGTTTGTATT 13 V_FOXJ2_01_M00422 TRANSFAC + 152262148 152262165 3.0E-06 AAAAATACAAACATTAGC 18 V_SATB1_01_M01232 TRANSFAC - 152266112 152266123 2.0E-06 TTTTAGCAACAA 12 V_SOX1_03_M02802 TRANSFAC - 152265494 152265509 1.0E-05 TTGTAATTCAGTAGAT 16 V_SOX1_03_M02802 TRANSFAC - 152266208 152266223 4.0E-06 TTGAAATTCAAAATGT 16 V_HOMEZ_01_M01429 TRANSFAC - 152265540 152265556 7.0E-06 GGATATTCGTTATTAAA 17 V_SOX2_Q6_M01272 TRANSFAC + 152265558 152265573 4.0E-06 CAGGCCATTGTTATGT 16 V_BARHL2_01_M01446 TRANSFAC + 152266192 152266207 8.0E-06 TCTGAGCAATTAACTC 16 V_MEF2_01_M00006 TRANSFAC - 152261989 152262004 7.0E-06 TTCTCACAATAATTCT 16 V_SP1_Q2_01_M00933 TRANSFAC - 152267182 152267191 4.0E-06 CCCCGCCCCC 10 V_ARP1_01_M00155 TRANSFAC + 152265992 152266007 3.0E-06 CGAACTCCTGACCTCA 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 152265344 152265357 2.0E-06 GGCGGGGGAGGAGC 14 V_HMX3_02_M01413 TRANSFAC + 152266193 152266209 9.0E-06 CTGAGCAATTAACTCAC 17 V_SP1_Q4_01_M00932 TRANSFAC + 152265514 152265526 8.0E-06 TATGGGCGGGGCC 13 V_SMAD1_01_M01590 TRANSFAC - 152265561 152265572 7.0E-06 CATAACAATGGC 12 V_T3RALPHA_Q6_M01724 TRANSFAC - 152265999 152266009 5.0E-06 TCTGAGGTCAG 11 V_HSF1_Q6_01_M02017 TRANSFAC - 152267133 152267146 8.0E-06 TAGACTTCTAGAAC 14

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