Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

AGGF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55109 angiogenic factor with G patch and FHA domains 1 chr5 + 76321209 - 76326709 76326209 Transcription Factor Binding Sites   Download all TFBS in the AGGF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 76327012 76327028 5.0E-06 AAGTTCAATTCACGCCA 17 STAT1_MA0137.2 JASPAR - 76326335 76326349 1.0E-06 ACTTTCCTGGAAACT 15 ELK1_MA0028.1 JASPAR - 76326236 76326245 5.0E-06 GAGCCGGAAA 10 ELK1_MA0028.1 JASPAR - 76326350 76326359 1.0E-06 AAACCGGAAA 10 Stat3_MA0144.1 JASPAR - 76326337 76326346 4.0E-06 TTCCTGGAAA 10 Stat3_MA0144.1 JASPAR + 76326338 76326347 1.0E-06 TTCCAGGAAA 10 ETV6_ETS_full_dimeric_15_1 SELEX - 76326192 76326206 2.0E-06 ACGGAACAGGAAGCG 15 V_LEF1_04_M02774 TRANSFAC - 76326018 76326034 9.0E-06 ATGTTCTTTGAACAAAC 17 V_BCL6B_03_M02740 TRANSFAC - 76326334 76326349 5.0E-06 ACTTTCCTGGAAACTA 16 V_BCL6_01_M01183 TRANSFAC + 76326337 76326352 1.0E-06 TTTCCAGGAAAGTTTT 16 V_NKX25_Q6_M02108 TRANSFAC - 76326427 76326437 1.0E-05 CTCACTTGTAG 11 V_AP2_Q6_01_M00915 TRANSFAC + 76326137 76326149 1.0E-05 CCCTCCGCAGGCC 13 V_STAT5B_01_M00459 TRANSFAC - 76326335 76326349 3.0E-06 ACTTTCCTGGAAACT 15 V_E2A_Q2_M00804 TRANSFAC - 76326708 76326721 7.0E-06 GCACCTGCCGCTTG 14 V_PAX_Q6_M00808 TRANSFAC - 76326433 76326443 6.0E-06 CTGAAACTCAC 11 V_AR_03_M00956 TRANSFAC + 76325954 76325980 0.0E+00 ATTTCTGGGATACTCTGTTCTTATTTG 27 V_HNF6_Q6_M00639 TRANSFAC + 76326992 76327003 1.0E-06 TTAAATCAATGT 12 V_TCF3_04_M02816 TRANSFAC + 76326018 76326034 3.0E-06 GTTTGTTCAAAGAACAT 17 V_PR_01_M00954 TRANSFAC + 76325954 76325980 2.0E-06 ATTTCTGGGATACTCTGTTCTTATTTG 27 V_ZFP105_03_M02827 TRANSFAC - 76325968 76325982 8.0E-06 TACAAATAAGAACAG 15 V_AP2BETA_Q3_M01858 TRANSFAC - 76326139 76326154 4.0E-06 GTCTCGGCCTGCGGAG 16 V_AP2BETA_Q3_M01858 TRANSFAC - 76326812 76326827 3.0E-06 GCGCGGGGCTGAGGAG 16 V_AHR_01_M00139 TRANSFAC + 76327004 76327021 1.0E-06 CTCGCGGCTGGCGTGAAT 18 V_GR_01_M00955 TRANSFAC + 76325954 76325980 0.0E+00 ATTTCTGGGATACTCTGTTCTTATTTG 27 V_TCF7_03_M02817 TRANSFAC + 76326018 76326034 2.0E-06 GTTTGTTCAAAGAACAT 17 V_STAT4_Q5_M02117 TRANSFAC + 76326338 76326347 7.0E-06 TTCCAGGAAA 10 V_TFIII_Q6_M00706 TRANSFAC - 76326305 76326313 6.0E-06 AGAGGGAGG 9 V_MYOD_Q6_01_M00929 TRANSFAC + 76326709 76326726 8.0E-06 AAGCGGCAGGTGCGGGAG 18 V_TCF7_04_M02921 TRANSFAC - 76325974 76325988 1.0E-06 TTGTTTTACAAATAA 15 V_FPM315_01_M01587 TRANSFAC - 76326301 76326312 3.0E-06 GAGGGAGGAGCG 12 V_STAT1STAT1_Q3_M01212 TRANSFAC + 76326336 76326348 1.0E-06 GTTTCCAGGAAAG 13 V_STAT5A_01_M00457 TRANSFAC - 76326335 76326349 6.0E-06 ACTTTCCTGGAAACT 15 V_SATB1_01_M01232 TRANSFAC - 76325974 76325985 9.0E-06 TTTTACAAATAA 12 V_PR_02_M00957 TRANSFAC + 76325954 76325980 1.0E-06 ATTTCTGGGATACTCTGTTCTTATTTG 27 V_CTF1_01_M01196 TRANSFAC - 76326450 76326463 8.0E-06 TGGCCCCTGGCCAT 14 V_EHF_07_M02849 TRANSFAC - 76325990 76326005 5.0E-06 ATGCATTTCCTATCTC 16 TLX1_NFIC_MA0119.1 JASPAR - 76326450 76326463 8.0E-06 TGGCCCCTGGCCAT 14 V_STAT1_Q6_M01823 TRANSFAC + 76326338 76326347 2.0E-06 TTCCAGGAAA 10 V_ATATA_B_M00311 TRANSFAC - 76327025 76327034 5.0E-06 GTACTTAAGT 10 V_STAT1_05_M01260 TRANSFAC - 76326328 76326349 4.0E-06 ACTTTCCTGGAAACTACCTTCT 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.