Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CXorf57 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 55086 chromosome X open reading frame 57 chrX + 105850159 - 105855659 105855159 Transcription Factor Binding Sites   Download all TFBS in the CXorf57 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NEUROD2_bHLH_full_dimeric_10_1 SELEX + 105854804 105854813 3.0E-06 AACATATGTT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 105854804 105854813 3.0E-06 AACATATGTT 10 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 105854801 105854809 5.0E-06 TATGTTAAT 9 ZBTB7B_C2H2_full_monomeric_12_1 SELEX + 105854982 105854993 5.0E-06 ACAACCACCGAT 12 POU2F3_POU_DBD_monomeric_9_1 SELEX - 105854801 105854809 6.0E-06 TATGTTAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 105854798 105854811 8.0E-06 CATATGTTAATGTT 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 105854800 105854810 3.0E-06 ATATGTTAATG 11 E2F2_E2F_DBD_dimeric_16_1 SELEX - 105855228 105855243 7.0E-06 AAAACCGCGCGCTTTG 16 POU3F4_POU_DBD_monomeric_9_1 SELEX - 105854801 105854809 5.0E-06 TATGTTAAT 9 POU3F3_POU_DBD_monomeric_13_1 SELEX - 105854799 105854811 6.0E-06 CATATGTTAATGT 13 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 105854804 105854813 0.0E+00 AACATATGTT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 105854804 105854813 0.0E+00 AACATATGTT 10 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 105854803 105854814 0.0E+00 TAACATATGTTA 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 105854803 105854814 0.0E+00 TAACATATGTTA 12 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 105854804 105854813 0.0E+00 AACATATGTT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 105854804 105854813 0.0E+00 AACATATGTT 10 MZF1_5-13_MA0057.1 JASPAR - 105854993 105855002 4.0E-06 GGAGGGGGAA 10 GMEB2_SAND_DBD_dimer-of-dimers_15_1 SELEX + 105855064 105855078 4.0E-06 TACGTAACTCGCGCG 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 105854799 105854810 1.0E-06 ATATGTTAATGT 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 105854898 105854912 1.0E-06 GAAAAGAGAAAGTGG 15 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 105854804 105854813 0.0E+00 AACATATGTT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 105854804 105854813 0.0E+00 AACATATGTT 10 ZBTB7C_C2H2_full_monomeric_12_1 SELEX + 105854982 105854993 4.0E-06 ACAACCACCGAT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 105854800 105854811 5.0E-06 CATATGTTAATG 12 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 105854804 105854813 1.0E-06 AACATATGTT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 105854804 105854813 1.0E-06 AACATATGTT 10 SPI1_ETS_full_monomeric_14_1 SELEX - 105854899 105854912 8.0E-06 GAAAAGAGAAAGTG 14 POU3F2_POU_DBD_monomeric_12_1 SELEX - 105854799 105854810 2.0E-06 ATATGTTAATGT 12 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 105854804 105854813 2.0E-06 AACATATGTT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 105854804 105854813 2.0E-06 AACATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX + 105854804 105854813 1.0E-06 AACATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 105854804 105854813 1.0E-06 AACATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 105854804 105854813 1.0E-06 AACATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 105854804 105854813 1.0E-06 AACATATGTT 10 TAL1_TCF3_MA0091.1 JASPAR + 105854802 105854813 5.0E-06 TTAACATATGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 105854804 105854815 5.0E-06 TTAACATATGTT 12 V_NF1A_Q6_M02103 TRANSFAC - 105854839 105854854 9.0E-06 TGGGCTTTGGGCCAGG 16 V_HOXA13_02_M01297 TRANSFAC - 105855239 105855247 1.0E-06 AAATAAAAC 9 V_AR_Q6_01_M01996 TRANSFAC + 105854827 105854841 3.0E-06 TTACTTTCTGTTCCT 15 V_SP1_Q6_01_M00931 TRANSFAC + 105855126 105855135 7.0E-06 GGGGCGGGGT 10 V_IRF_Q6_01_M00972 TRANSFAC - 105854901 105854911 2.0E-06 AAAAGAGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 105854898 105854913 2.0E-06 GGAAAAGAGAAAGTGG 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 105854868 105854880 3.0E-06 CTGAGCTTTGACT 13 V_OCT1_01_M00135 TRANSFAC - 105854796 105854814 3.0E-06 TAACATATGTTAATGTTAT 19 V_POU3F2_02_M00464 TRANSFAC - 105854801 105854810 1.0E-06 ATATGTTAAT 10 V_EAR2_Q2_M01728 TRANSFAC + 105854869 105854882 1.0E-05 TGAGCTTTGACTCT 14 V_SP1_02_M01303 TRANSFAC + 105855126 105855136 3.0E-06 GGGGCGGGGTG 11 V_FKLF_Q5_M01837 TRANSFAC + 105855131 105855140 2.0E-06 GGGGTGGGAG 10 V_POLY_C_M00212 TRANSFAC - 105855230 105855247 6.0E-06 AAATAAAACCGCGCGCTT 18 V_IRF2_01_M00063 TRANSFAC - 105854900 105854912 1.0E-06 GAAAAGAGAAAGT 13 V_ZBP89_Q4_M01816 TRANSFAC + 105855017 105855026 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC + 105855124 105855136 4.0E-06 GAGGGGCGGGGTG 13 V_IRF_Q6_M00772 TRANSFAC + 105854897 105854911 1.0E-06 GCCACTTTCTCTTTT 15 V_ISRE_01_M00258 TRANSFAC + 105854899 105854913 4.0E-06 CACTTTCTCTTTTCC 15 V_OCT1_04_M00138 TRANSFAC - 105854794 105854816 3.0E-06 GTTAACATATGTTAATGTTATAA 23 V_BBX_04_M02843 TRANSFAC - 105854805 105854821 4.0E-06 AGTTGGTTAACATATGT 17 V_HNF4_DR1_Q3_M00764 TRANSFAC + 105854869 105854881 3.0E-06 TGAGCTTTGACTC 13 V_SP1_01_M00008 TRANSFAC + 105855126 105855135 3.0E-06 GGGGCGGGGT 10 V_MZF1_02_M00084 TRANSFAC - 105854993 105855005 6.0E-06 AGGGGAGGGGGAA 13 V_ICSBP_Q6_M00699 TRANSFAC - 105854828 105854839 6.0E-06 GAACAGAAAGTA 12 V_ICSBP_Q6_M00699 TRANSFAC - 105854899 105854910 2.0E-06 AAAGAGAAAGTG 12 V_MAF_Q6_01_M00983 TRANSFAC - 105854875 105854885 6.0E-06 TGCAGAGTCAA 11 V_TFIII_Q6_M00706 TRANSFAC - 105854961 105854969 6.0E-06 AGAGGGAGG 9 V_AP3_Q6_M00690 TRANSFAC + 105854821 105854828 5.0E-06 TCTAAATT 8 V_FOXL1_02_M02857 TRANSFAC + 105854791 105854806 4.0E-06 ATGTTATAACATTAAC 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 105854801 105854816 6.0E-06 ATTAACATATGTTAAC 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 105854801 105854816 8.0E-06 GTTAACATATGTTAAT 16 NR1H2_RXRA_MA0115.1 JASPAR - 105854867 105854883 7.0E-06 CAGAGTCAAAGCTCAGG 17 V_HNF1B_01_M01425 TRANSFAC + 105854807 105854823 1.0E-06 ATATGTTAACCAACTCT 17 V_PLZF_02_M01075 TRANSFAC + 105854811 105854839 1.0E-06 GTTAACCAACTCTAAATTACTTTCTGTTC 29 V_ZFP281_01_M01597 TRANSFAC - 105855016 105855026 9.0E-06 TGGGGGAGGGA 11 V_IRF1_Q6_01_M01881 TRANSFAC + 105854899 105854912 0.0E+00 CACTTTCTCTTTTC 14 V_FOXO1_04_M01969 TRANSFAC - 105851437 105851456 4.0E-06 CCAAACATCACCACGGTAAC 20 V_IRF1_01_M00062 TRANSFAC - 105854900 105854912 8.0E-06 GAAAAGAGAAAGT 13 V_SP1_Q2_01_M00933 TRANSFAC - 105855125 105855134 7.0E-06 CCCCGCCCCT 10 V_LPOLYA_B_M00318 TRANSFAC - 105855584 105855591 7.0E-06 CAATAAAG 8 V_RFX1_02_M00281 TRANSFAC - 105851435 105851452 6.0E-06 ACATCACCACGGTAACAA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.