Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

TTC22


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
55001 tetratricopeptide repeat domain 22 chr1 -55266441 - 55271941 55266941

Transcription Factor Binding Sites

 
Download all TFBS in the TTC22 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NF-kappaB_MA0061.1 JASPAR - 55264948 55264957 9.0E-06 GGGGATTCCC 10
SP3_C2H2_DBD_monomeric_11_1 SELEX + 55264862 55264872 7.0E-06 GCCACACCCCC 11
SOX10_HMG_full_dimeric_14_1 SELEX + 55264931 55264944 2.0E-06 TGGATGTTCACTCA 14
ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 55270396 55270414 4.0E-06 GGAGCTCAATTGGAGGTCA 19
ZNF713_C2H2_full_monomeric_17_1 SELEX - 55267457 55267473 4.0E-06 CAGAGAAATCCCAGGAA 17
KLF16_C2H2_DBD_monomeric_11_1 SELEX + 55264862 55264872 4.0E-06 GCCACACCCCC 11
Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 55269608 55269620 9.0E-06 TGGACGGGTTAAA 13
TBX5_TBX_DBD_dimeric_20_1 SELEX - 55270068 55270087 5.0E-06 AGGTGTGGATGTGCACACTC 20
SRY_HMG_DBD_dimeric_16_1 SELEX + 55264643 55264658 4.0E-06 AACCATCATTATTGTC 16
SRY_HMG_DBD_dimeric_16_1 SELEX - 55264643 55264658 4.0E-06 GACAATAATGATGGTT 16
EWSR1-FLI1_MA0149.1 JASPAR - 55265106 55265123 2.0E-06 GAAAGGGGTGCAGGAAGC 18
NFKB1_MA0105.1 JASPAR + 55264947 55264957 1.0E-06 GGGGAATCCCC 11
NFKB1_MA0105.1 JASPAR - 55264947 55264957 0.0E+00 GGGGATTCCCC 11
SOX8_HMG_DBD_dimeric_14_1 SELEX + 55264931 55264944 5.0E-06 TGGATGTTCACTCA 14
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 55264514 55264527 4.0E-06 CATAAACATTGATC 14
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 55264641 55264654 7.0E-06 GCAACCATCATTAT 14
NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 55264946 55264958 1.0E-06 TGGGGAATCCCCA 13
NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 55264946 55264958 1.0E-06 TGGGGATTCCCCA 13
JDP2_bZIP_full_dimeric_12_1 SELEX + 55264711 55264722 7.0E-06 CATGATGTCATC 12
JDP2_bZIP_full_dimeric_12_1 SELEX - 55264711 55264722 7.0E-06 GATGACATCATG 12
RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 55270396 55270413 0.0E+00 GAGCTCAATTGGAGGTCA 18
ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 55270396 55270413 7.0E-06 GAGCTCAATTGGAGGTCA 18
Foxq1_MA0040.1 JASPAR + 55264517 55264527 5.0E-06 CAATGTTTATG 11
Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 55270396 55270412 1.0E-06 AGCTCAATTGGAGGTCA 17
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 55264514 55264527 9.0E-06 GATCAATGTTTATG 14
RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 55270396 55270412 2.0E-06 AGCTCAATTGGAGGTCA 17
znf143_MA0088.1 JASPAR - 55270458 55270477 2.0E-06 TATCTCCCAGGCTGCTGTGA 20
ATF4_bZIP_DBD_dimeric_13_1 SELEX + 55264634 55264646 8.0E-06 AAGTGATGCAACC 13
Atf4_bZIP_DBD_dimeric_14_1 SELEX - 55264485 55264498 1.0E-05 GGGATTATGCAACA 14
Atf4_bZIP_DBD_dimeric_14_1 SELEX + 55264633 55264646 4.0E-06 AAAGTGATGCAACC 14
MGA_TBX_DBD_dimeric_18_2 SELEX - 55270069 55270086 1.0E-05 GGTGTGGATGTGCACACT 18
TBX4_TBX_DBD_dimeric_20_1 SELEX + 55270068 55270087 8.0E-06 GAGTGTGCACATCCACACCT 20
TBX4_TBX_DBD_dimeric_20_1 SELEX - 55270068 55270087 8.0E-06 AGGTGTGGATGTGCACACTC 20
SP1_C2H2_DBD_monomeric_11_1 SELEX + 55264862 55264872 8.0E-06 GCCACACCCCC 11
NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 55264946 55264958 1.0E-06 TGGGGATTCCCCA 13
Stat3_MA0144.1 JASPAR - 55269883 55269892 7.0E-06 TGCCAGGAAA 10
TBX2_TBX_full_dimeric_18_1 SELEX - 55270069 55270086 8.0E-06 GGTGTGGATGTGCACACT 18
IRF9_IRF_full_trimeric_15_1 SELEX + 55270502 55270516 6.0E-06 AATGAAACTGATAAT 15
FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 55264514 55264527 9.0E-06 CATAAACATTGATC 14
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 55267441 55267451 8.0E-06 CCTCATAAATA 11
RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 55270396 55270415 1.0E-06 AGGAGCTCAATTGGAGGTCA 20
IRF4_IRF_full_dimeric_15_1 SELEX + 55270503 55270517 8.0E-06 ATGAAACTGATAATG 15
RUNX1_MA0002.2 JASPAR - 55265134 55265144 2.0E-06 GGCTGTGGTTT 11
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 55270432 55270450 1.0E-06 ATTACCTAAATCAGGTCAT 19
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 55270432 55270450 0.0E+00 ATGACCTGATTTAGGTAAT 19
REST_MA0138.2 JASPAR - 55269636 55269656 0.0E+00 ATAAGCACATTGGAGAGCTCC 21
IRF3_IRF_full_trimeric_21_1 SELEX + 55270497 55270517 4.0E-06 TATAGAATGAAACTGATAATG 21
ETV6_ETS_full_dimeric_15_1 SELEX - 55267024 55267038 3.0E-06 GCGAAAGCGGAAACA 15
HNF1A_MA0046.1 JASPAR - 55264585 55264598 9.0E-06 TGTTATTATTTTGC 14
HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 55264497 55264506 8.0E-06 CCAATAAACC 10
V_NFKB_C_M00208 TRANSFAC - 55264946 55264957 5.0E-06 GGGGATTCCCCA 12
V_NFKB_C_M00208 TRANSFAC + 55264947 55264958 7.0E-06 GGGGAATCCCCA 12
V_KLF15_Q2_M01714 TRANSFAC + 55267214 55267227 4.0E-06 GAGCTGGGGCGTAC 14
V_AP1_Q2_M00173 TRANSFAC + 55269858 55269868 6.0E-06 GCTGACTCATT 11
V_ZSCAN4_03_M02838 TRANSFAC - 55270066 55270082 3.0E-06 TGGATGTGCACACTCTC 17
V_AML_Q6_M00769 TRANSFAC - 55265132 55265146 9.0E-06 TGGGCTGTGGTTTCT 15
V_MEQCJUN_02_M02048 TRANSFAC + 55270440 55270450 8.0E-06 AATCAGGTCAT 11
V_NF1A_Q6_M02103 TRANSFAC - 55265203 55265218 6.0E-06 TGGGCTAGGAGCCAGG 16
V_RORA1_01_M00156 TRANSFAC - 55270395 55270407 5.0E-06 AATTGGAGGTCAT 13
V_GM397_03_M02760 TRANSFAC - 55270066 55270082 2.0E-06 TGGATGTGCACACTCTC 17
V_GM397_03_M02760 TRANSFAC + 55270067 55270083 2.0E-06 AGAGTGTGCACATCCAC 17
V_FOXJ1_04_M02854 TRANSFAC + 55264588 55264602 4.0E-06 AAATAATAACAGAAC 15
V_GTF2IRD1_01_M01229 TRANSFAC - 55264490 55264498 3.0E-06 GGGATTATG 9
V_JUNDM2_03_M02772 TRANSFAC + 55264709 55264724 7.0E-06 AGCATGATGTCATCTA 16
V_JUNDM2_03_M02772 TRANSFAC - 55264709 55264724 8.0E-06 TAGATGACATCATGCT 16
V_PU1_Q4_M01172 TRANSFAC - 55267184 55267202 7.0E-06 CAAGTTCTCTTCCTCCTCT 19
V_HOXD13_01_M01404 TRANSFAC - 55270490 55270505 3.0E-06 CATTCTATAAAATGAA 16
V_HOXA13_03_M01430 TRANSFAC - 55267439 55267454 2.0E-06 AAGCCTCATAAATAAT 16
V_HOXC13_01_M01317 TRANSFAC - 55267439 55267454 3.0E-06 AAGCCTCATAAATAAT 16
V_HELIOSA_01_M01003 TRANSFAC - 55264492 55264502 7.0E-06 TATTGGGATTA 11
V_CEBPB_01_M00109 TRANSFAC - 55267062 55267075 4.0E-06 TGGTTGTGCAATGT 14
V_AP1_Q6_M00174 TRANSFAC + 55269858 55269868 2.0E-06 GCTGACTCATT 11
V_ZFP128_03_M02828 TRANSFAC + 55267216 55267232 2.0E-06 GCTGGGGCGTACCCAAG 17
V_FOXA2_02_M02853 TRANSFAC + 55264586 55264600 9.0E-06 CAAAATAATAACAGA 15
V_FOXA2_02_M02853 TRANSFAC + 55264589 55264603 5.0E-06 AATAATAACAGAACT 15
V_RUNX1_01_M02257 TRANSFAC - 55265134 55265144 2.0E-06 GGCTGTGGTTT 11
V_GFI1_01_M00250 TRANSFAC + 55265003 55265026 9.0E-06 TACCCCTGAATCACTGCTTTCCTG 24
V_GFI1_01_M00250 TRANSFAC + 55270432 55270455 3.0E-06 ATTACCTAAATCAGGTCATTTCAT 24
V_SOX1_04_M02906 TRANSFAC + 55264648 55264662 9.0E-06 TCATTATTGTCATCC 15
V_CEBPB_02_M00117 TRANSFAC + 55264484 55264497 2.0E-06 TTGTTGCATAATCC 14
V_FOXK1_04_M02856 TRANSFAC + 55264587 55264601 0.0E+00 AAAATAATAACAGAA 15
V_TATA_C_M00216 TRANSFAC - 55270493 55270502 3.0E-06 TCTATAAAAT 10
V_ASCL2_03_M02737 TRANSFAC - 55264814 55264830 2.0E-06 CCCAGCAGCTGCTCCAC 17
V_REST_01_M01256 TRANSFAC + 55269632 55269653 0.0E+00 CCAGGGAGCTCTCCAATGTGCT 22
V_SOX12_04_M02900 TRANSFAC + 55270523 55270538 2.0E-06 ACTCAGAGAAAGAAGT 16
V_NFKAPPAB50_01_M00051 TRANSFAC - 55264948 55264957 2.0E-06 GGGGATTCCC 10
V_ZIC3_05_M02941 TRANSFAC - 55270410 55270424 5.0E-06 GCACACAGCAGGAGC 15
V_AP1_C_M00199 TRANSFAC - 55269859 55269867 3.0E-06 ATGAGTCAG 9
V_MAFK_Q3_M02022 TRANSFAC - 55267307 55267317 1.0E-06 TGACTCAGCTC 11
V_MAFK_Q3_M02022 TRANSFAC - 55269856 55269866 2.0E-06 TGAGTCAGCTC 11
V_TCF1_07_M02919 TRANSFAC - 55264490 55264503 8.0E-06 TTATTGGGATTATG 14
V_ISGF3G_03_M02771 TRANSFAC + 55270498 55270512 6.0E-06 ATAGAATGAAACTGA 15
V_STAF_02_M00264 TRANSFAC - 55270456 55270476 8.0E-06 ATCTCCCAGGCTGCTGTGAGG 21
V_AP1_01_M00517 TRANSFAC - 55269857 55269869 2.0E-06 AAATGAGTCAGCT 13
V_STAT3_03_M01595 TRANSFAC - 55269879 55269894 6.0E-06 GCTGCCAGGAAAGCCA 16
V_ISGF4G_04_M02875 TRANSFAC + 55264591 55264604 4.0E-06 TAATAACAGAACTA 14
V_MAF_Q6_01_M00983 TRANSFAC + 55267308 55267318 5.0E-06 AGCTGAGTCAG 11
V_GATA4_Q3_M00632 TRANSFAC + 55270529 55270540 7.0E-06 AGAAAGAAGTGA 12
V_NEUROD_02_M01288 TRANSFAC + 55270411 55270422 2.0E-06 CTCCTGCTGTGT 12
V_PTF1BETA_Q6_M00657 TRANSFAC + 55265130 55265143 4.0E-06 GAAGAAACCACAGC 14
V_HFH8_01_M00294 TRANSFAC + 55264517 55264529 5.0E-06 CAATGTTTATGAA 13
V_VJUN_01_M00036 TRANSFAC - 55264709 55264724 6.0E-06 TAGATGACATCATGCT 16
V_ZIC2_05_M02940 TRANSFAC - 55270410 55270424 9.0E-06 GCACACAGCAGGAGC 15
V_AP4_01_M00005 TRANSFAC - 55267351 55267368 7.0E-06 TGGGACAGCGGCAGGAGT 18
V_CEBPA_01_M00116 TRANSFAC + 55267062 55267075 2.0E-06 ACATTGCACAACCA 14
V_SP4_04_M02914 TRANSFAC + 55267136 55267150 4.0E-06 AAAAGGCGTGTTTTT 15
V_FOXL1_02_M02857 TRANSFAC + 55264582 55264597 2.0E-06 ACAGCAAAATAATAAC 16
V_HEN1_02_M00058 TRANSFAC - 55265171 55265192 9.0E-06 TCTTGTCTCAGCTGCAACACTA 22
V_GFI1B_01_M01058 TRANSFAC + 55270438 55270449 3.0E-06 TAAATCAGGTCA 12
V_CPHX_01_M01478 TRANSFAC + 55264712 55264725 6.0E-06 ATGATGTCATCTAA 14
V_PARP_Q3_M01211 TRANSFAC - 55264672 55264681 8.0E-06 CAAGAAATAG 10
V_AIRE_01_M00999 TRANSFAC - 55264490 55264515 8.0E-06 TCAGCTCCAGGTTTATTGGGATTATG 26
V_PITX2_Q2_M00482 TRANSFAC + 55264490 55264500 6.0E-06 CATAATCCCAA 11
V_REST_02_M02256 TRANSFAC - 55269636 55269656 0.0E+00 ATAAGCACATTGGAGAGCTCC 21
V_PLZF_02_M01075 TRANSFAC + 55264489 55264517 7.0E-06 GCATAATCCCAATAAACCTGGAGCTGATC 29
V_IRF6_03_M02770 TRANSFAC + 55264611 55264627 9.0E-06 CAGAACGAAACCTCTGA 17
V_NFKAPPAB_01_M00054 TRANSFAC - 55264948 55264957 9.0E-06 GGGGATTCCC 10
V_EWSR1FLI1_01_M02252 TRANSFAC - 55265106 55265123 2.0E-06 GAAAGGGGTGCAGGAAGC 18
V_VMAF_01_M00035 TRANSFAC + 55267054 55267072 2.0E-06 AGACGCTGACATTGCACAA 19
V_NFE2_Q6_M02104 TRANSFAC - 55267304 55267319 5.0E-06 CCTGACTCAGCTCAAG 16
V_NFE2_Q6_M02104 TRANSFAC - 55269853 55269868 1.0E-06 AATGAGTCAGCTCTGC 16
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 55265134 55265141 1.0E-05 TGTGGTTT 8
V_FOXO1_04_M01969 TRANSFAC + 55270075 55270094 7.0E-06 CACATCCACACCTTGTTGAC 20
V_NFE2_01_M00037 TRANSFAC + 55269857 55269867 3.0E-06 AGCTGACTCAT 11
V_PIT1_Q6_M00802 TRANSFAC - 55264514 55264531 6.0E-06 GCTTCATAAACATTGATC 18
V_CEBP_Q2_01_M00912 TRANSFAC + 55267064 55267075 5.0E-06 ATTGCACAACCA 12
V_BRN3C_01_M01408 TRANSFAC + 55267438 55267453 4.0E-06 CATTATTTATGAGGCT 16
V_HOXD10_01_M01375 TRANSFAC - 55270489 55270505 2.0E-06 CATTCTATAAAATGAAA 17
V_HNF1A_01_M02162 TRANSFAC - 55264585 55264598 9.0E-06 TGTTATTATTTTGC 14
V_MIF1_01_M00279 TRANSFAC + 55267124 55267141 5.0E-06 TCGGTGCAAGGCAAAAGG 18
V_ZIC1_05_M02939 TRANSFAC - 55270410 55270424 5.0E-06 GCACACAGCAGGAGC 15
V_CEBPA_Q6_M01866 TRANSFAC - 55267063 55267075 4.0E-06 TGGTTGTGCAATG 13
V_OTX3_01_M01403 TRANSFAC - 55264487 55264503 1.0E-06 TTATTGGGATTATGCAA 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL