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C20orf27 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54976 chromosome 20 open reading frame 27 chr20 - 3747952 - 3753452 3748452 Transcription Factor Binding Sites   Download all TFBS in the C20orf27 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 3749590 3749600 8.0E-06 GGTGACTCATG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 3749590 3749600 6.0E-06 CATGAGTCACC 11 ZNF713_C2H2_full_monomeric_17_1 SELEX - 3749851 3749867 8.0E-06 ATTTCAAAAGCCACGAA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 3748680 3748690 1.0E-05 GCCCCGCCCCC 11 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 3748537 3748546 6.0E-06 GGCACGTGAC 10 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 3750641 3750654 1.0E-05 CACCACACACAAAG 14 NFYA_MA0060.1 JASPAR - 3748444 3748459 1.0E-06 ATCAACCAATGGGCGG 16 NFYA_MA0060.1 JASPAR + 3748485 3748500 8.0E-06 CCGGACCAATGAGCGG 16 GCM1_GCM_full_dimeric_16_1 SELEX + 3749167 3749182 3.0E-06 ATGTGGGCGCCTGCAA 16 Pax4_MA0068.1 JASPAR + 3752451 3752480 7.0E-06 CAAAAAAAGAGAAAACACACACACACACAC 30 Pax4_MA0068.1 JASPAR + 3752453 3752482 4.0E-06 AAAAAAGAGAAAACACACACACACACACAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 3744386 3744399 8.0E-06 CAGAAGAGGAACTA 14 Klf4_MA0039.2 JASPAR + 3748465 3748474 1.0E-05 AGGGTGGGGC 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 3749120 3749135 5.0E-06 CGCTGCCATGGCGACC 16 HES7_bHLH_DBD_dimeric_12_1 SELEX - 3748536 3748547 6.0E-06 TGGCACGTGACG 12 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 3748537 3748546 5.0E-06 GGCACGTGAC 10 SP1_MA0079.2 JASPAR - 3747744 3747753 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 3748681 3748690 7.0E-06 CCCCGCCCCC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 3748537 3748546 8.0E-06 GGCACGTGAC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 3748677 3748693 2.0E-06 TAGGCCCCGCCCCCGCT 17 Lhx3_MA0135.1 JASPAR - 3749484 3749496 4.0E-06 AGATTAATTTGCC 13 Lhx3_MA0135.1 JASPAR + 3749487 3749499 2.0E-06 AAATTAATCTTTC 13 MZF1_5-13_MA0057.1 JASPAR - 3749804 3749813 4.0E-06 GGAGGGGGAA 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 3749120 3749135 7.0E-06 GGTCGCCATGGCAGCG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 3749120 3749135 6.0E-06 CGCTGCCATGGCGACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 3749120 3749135 8.0E-06 GGTCGCCATGGCAGCG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 3749120 3749135 5.0E-06 CGCTGCCATGGCGACC 16 JDP2_bZIP_full_dimeric_9_1 SELEX - 3749591 3749599 1.0E-05 ATGAGTCAC 9 Pou5f1_MA0142.1 JASPAR + 3749639 3749653 8.0E-06 TTTTCACATTCTGAT 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 3750682 3750692 7.0E-06 GTTCCTCACAC 11 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 3752461 3752473 1.0E-05 GAAAACACACACA 13 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 3748537 3748546 4.0E-06 GGCACGTGAC 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX - 3748537 3748546 6.0E-06 GGCACGTGAC 10 V_MEQ_01_M02049 TRANSFAC + 3752464 3752472 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 3752455 3752474 3.0E-06 GTGTGTGTGTTTTCTCTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 3752463 3752482 5.0E-06 GTGTGTGTGTGTGTGTGTTT 20 V_SPI1_01_M01203 TRANSFAC + 3744386 3744402 7.0E-06 CAGAAGAGGAACTACAG 17 V_OBOX5_05_M03066 TRANSFAC - 3749485 3749501 7.0E-06 CAGAAAGATTAATTTGC 17 V_BACH2_01_M00490 TRANSFAC - 3749590 3749600 2.0E-06 CATGAGTCACC 11 V_NRSF_Q4_M01028 TRANSFAC - 3749149 3749167 1.0E-06 TCCCACCCCGCGGTGCTGA 19 V_NKX29_01_M01352 TRANSFAC + 3749922 3749938 2.0E-06 TTAAGAGCACATAAATT 17 V_LRH1_Q5_01_M02098 TRANSFAC - 3748722 3748732 2.0E-06 GTTCAAGGCTA 11 V_FOXO4_02_M00476 TRANSFAC + 3749504 3749517 1.0E-05 CTCTTGTTTTCATC 14 V_POU5F1_02_M02245 TRANSFAC + 3749639 3749653 8.0E-06 TTTTCACATTCTGAT 15 V_CBF_02_M01080 TRANSFAC + 3750653 3750668 3.0E-06 AGAACTGTGGTCTCCT 16 V_SP1_Q6_01_M00931 TRANSFAC - 3748680 3748689 4.0E-06 GGGGCGGGGC 10 V_IRF_Q6_01_M00972 TRANSFAC + 3752455 3752465 3.0E-06 AAAAGAGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 3752453 3752468 7.0E-06 AAAAAAGAGAAAACAC 16 V_OTX_Q1_M01117 TRANSFAC - 3749488 3749495 5.0E-06 GATTAATT 8 V_FOXO3A_Q1_M01137 TRANSFAC - 3749504 3749515 6.0E-06 TGAAAACAAGAG 12 V_GABPA_04_M02858 TRANSFAC + 3748694 3748709 4.0E-06 CCTTCTTCCGCCTGGG 16 V_GABPA_04_M02858 TRANSFAC + 3748931 3748946 9.0E-06 ACCTCTTCCCCTTCCA 16 V_SP1_03_M02281 TRANSFAC - 3747744 3747753 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 3748681 3748690 7.0E-06 CCCCGCCCCC 10 V_AP2_Q6_M00189 TRANSFAC - 3748702 3748713 4.0E-06 ATCCCCCAGGCG 12 V_GKLF_02_M01588 TRANSFAC - 3748463 3748474 5.0E-06 GCCCCACCCTCC 12 V_PU1_Q4_M01172 TRANSFAC - 3744387 3744405 1.0E-06 ACCCTGTAGTTCCTCTTCT 19 V_NFY_Q6_01_M00775 TRANSFAC - 3748448 3748460 8.0E-06 GATCAACCAATGG 13 V_LDSPOLYA_B_M00317 TRANSFAC - 3752456 3752471 0.0E+00 TGTGTGTTTTCTCTTT 16 V_LDSPOLYA_B_M00317 TRANSFAC - 3752458 3752473 2.0E-06 TGTGTGTGTTTTCTCT 16 V_CEBPB_01_M00109 TRANSFAC + 3749856 3749869 4.0E-06 GGCTTTTGAAATAT 14 V_WT1_Q6_01_M02036 TRANSFAC + 3748433 3748442 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC - 3748678 3748691 5.0E-06 CGGGGGCGGGGCCT 14 V_OBOX5_02_M01480 TRANSFAC - 3749485 3749501 7.0E-06 CAGAAAGATTAATTTGC 17 V_CEBPE_Q6_M01868 TRANSFAC - 3749858 3749871 6.0E-06 TGATATTTCAAAAG 14 V_KROX_Q6_M00982 TRANSFAC + 3748682 3748695 0.0E+00 CCCGCCCCCGCTCC 14 V_SP1_Q6_M00196 TRANSFAC - 3748679 3748691 1.0E-06 CGGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 3747744 3747757 1.0E-05 GGGGGAGGGGGGAA 14 V_EGR1_Q6_M01873 TRANSFAC - 3748683 3748692 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC - 3752455 3752469 5.0E-06 TGTGTTTTCTCTTTT 15 V_PAX4_05_M01385 TRANSFAC - 3749481 3749497 9.0E-06 AAGATTAATTTGCCAAC 17 V_SOX_Q6_M01014 TRANSFAC - 3749028 3749040 1.0E-06 TTCTTTGTTCTGA 13 V_SOX12_04_M02900 TRANSFAC + 3750643 3750658 1.0E-06 CCACACACAAAGAACT 16 V_OCT4_02_M01124 TRANSFAC + 3749640 3749654 3.0E-06 TTTCACATTCTGATC 15 V_SOX11_03_M02795 TRANSFAC + 3749027 3749043 1.0E-06 ATCAGAACAAAGAAGGC 17 V_SP4_Q5_M01273 TRANSFAC + 3748680 3748690 1.0E-06 GCCCCGCCCCC 11 V_LRH1_Q5_M01142 TRANSFAC + 3748721 3748732 1.0E-06 CTAGCCTTGAAC 12 V_STRA13_01_M00985 TRANSFAC - 3748535 3748548 5.0E-06 CTGGCACGTGACGT 14 V_SP4_04_M02914 TRANSFAC + 3749196 3749210 8.0E-06 GAGAGGCGTGGCCCT 15 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 3748464 3748472 8.0E-06 GAGGGTGGG 9 V_T3R_Q6_M00963 TRANSFAC + 3750666 3750674 7.0E-06 CCTGTCCTT 9 V_SMAD3_03_M02794 TRANSFAC + 3747886 3747902 6.0E-06 CACTCCCAGACATCACT 17 V_NFY_01_M00287 TRANSFAC - 3748444 3748459 1.0E-06 ATCAACCAATGGGCGG 16 V_NFY_01_M00287 TRANSFAC + 3748485 3748500 6.0E-06 CCGGACCAATGAGCGG 16 V_FPM315_01_M01587 TRANSFAC - 3747602 3747613 4.0E-06 GAAGGAGGAGGG 12 V_PADS_C_M00211 TRANSFAC + 3750658 3750666 4.0E-06 TGTGGTCTC 9 V_FOXO3_01_M00477 TRANSFAC + 3749504 3749517 5.0E-06 CTCTTGTTTTCATC 14 V_OTX2_01_M01387 TRANSFAC - 3749485 3749501 7.0E-06 CAGAAAGATTAATTTGC 17 V_ZFP281_01_M01597 TRANSFAC + 3747743 3747753 3.0E-06 AGGGGGAGGGG 11 V_EGR1_06_M02744 TRANSFAC + 3748682 3748695 4.0E-06 CCCGCCCCCGCTCC 14 V_IRF1_Q6_01_M01881 TRANSFAC - 3752454 3752467 2.0E-06 TGTTTTCTCTTTTT 14 V_E4F1_Q6_M00694 TRANSFAC + 3748532 3748541 5.0E-06 CCTACGTCAC 10 V_PITX2_01_M01447 TRANSFAC - 3749485 3749501 6.0E-06 CAGAAAGATTAATTTGC 17 V_SOX12_03_M02796 TRANSFAC - 3749026 3749039 9.0E-06 TCTTTGTTCTGATG 14 V_SP1_Q2_01_M00933 TRANSFAC + 3748681 3748690 4.0E-06 CCCCGCCCCC 10 V_NFYA_Q5_M02106 TRANSFAC - 3748444 3748457 1.0E-05 CAACCAATGGGCGG 14 V_SP1_Q4_01_M00932 TRANSFAC - 3748679 3748691 1.0E-06 CGGGGGCGGGGCC 13 V_OBOX5_01_M01381 TRANSFAC - 3749485 3749501 4.0E-06 CAGAAAGATTAATTTGC 17 V_OBOX6_06_M03067 TRANSFAC + 3749485 3749501 4.0E-06 GCAAATTAATCTTTCTG 17 V_SMAD1_01_M01590 TRANSFAC + 3749029 3749040 2.0E-06 CAGAACAAAGAA 12 V_NANOG_02_M01247 TRANSFAC + 3749025 3749044 8.0E-06 GCATCAGAACAAAGAAGGCA 20 V_NANOG_02_M01247 TRANSFAC + 3752452 3752471 6.0E-06 AAAAAAAGAGAAAACACACA 20 V_OCT4_01_M01125 TRANSFAC + 3749639 3749653 9.0E-06 TTTTCACATTCTGAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.