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FOCAD Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54914 focadhesin chr9 + 20653308 - 20658808 20658308 Transcription Factor Binding Sites   Download all TFBS in the FOCAD promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 20658820 20658837 6.0E-06 AGAATCACCTACCAATTA 18 SPIC_ETS_full_monomeric_14_1 SELEX + 20659479 20659492 3.0E-06 AAGAAGAGGAAGTT 14 EWSR1-FLI1_MA0149.1 JASPAR + 20661168 20661185 1.0E-05 AGAAGTACGGAAGCAAAG 18 MSX1_homeodomain_full_monomeric_8_1 SELEX - 20658819 20658826 7.0E-06 CCAATTAA 8 Pax4_MA0068.1 JASPAR - 20658827 20658856 9.0E-06 GAAAACAATTCAACCCATAAGAATCACCTA 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 20659479 20659492 1.0E-06 AAGAAGAGGAAGTT 14 MSX2_homeodomain_DBD_monomeric_8_1 SELEX - 20658819 20658826 7.0E-06 CCAATTAA 8 GBX2_homeodomain_full_monomeric_10_1 SELEX - 20658818 20658827 5.0E-06 ACCAATTAAG 10 HMX3_homeodomain_DBD_monomeric_11_1 SELEX - 20658817 20658827 3.0E-06 ACCAATTAAGA 11 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 20659823 20659835 0.0E+00 GACTGATGCAATA 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 20659823 20659836 1.0E-06 AGACTGATGCAATA 14 BSX_homeodomain_DBD_monomeric_8_1 SELEX - 20658819 20658826 7.0E-06 CCAATTAA 8 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 20658820 20658837 3.0E-06 AGAATCACCTACCAATTA 18 Msx3_homeodomain_DBD_monomeric_8_1 SELEX - 20658819 20658826 7.0E-06 CCAATTAA 8 Pou5f1_MA0142.1 JASPAR - 20659564 20659578 1.0E-06 CCTTGACATGCAGAT 15 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 20658817 20658827 1.0E-06 ACCAATTAAGA 11 LBX2_homeodomain_DBD_monomeric_10_1 SELEX - 20658818 20658827 1.0E-05 ACCAATTAAG 10 SPI1_ETS_full_monomeric_14_1 SELEX + 20659479 20659492 1.0E-06 AAGAAGAGGAAGTT 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 20658820 20658837 5.0E-06 AGAATCACCTACCAATTA 18 Nobox_MA0125.1 JASPAR + 20658820 20658827 7.0E-06 TAATTGGT 8 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 20658817 20658827 2.0E-06 ACCAATTAAGA 11 V_FOXP1_01_M00987 TRANSFAC - 20659233 20659252 3.0E-06 CTTTTTAAATTTTTTTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 20659235 20659254 5.0E-06 TTCTTTTTAAATTTTTTTGT 20 V_SPI1_01_M01203 TRANSFAC + 20659479 20659495 2.0E-06 AAGAAGAGGAAGTTTGG 17 V_MSX3_01_M01341 TRANSFAC - 20658816 20658831 4.0E-06 ACCTACCAATTAAGAA 16 V_DBX1_01_M01483 TRANSFAC + 20659237 20659253 3.0E-06 AAAAAAATTTAAAAAGA 17 V_DBX1_01_M01483 TRANSFAC + 20659238 20659254 4.0E-06 AAAAAATTTAAAAAGAA 17 V_FOXP3_Q4_M00992 TRANSFAC + 20659735 20659751 8.0E-06 AAAGATTTTATGCAGGG 17 V_CHOP_01_M00249 TRANSFAC - 20659820 20659832 6.0E-06 TGATGCAATATCC 13 V_YY1_02_M00069 TRANSFAC + 20658779 20658798 0.0E+00 ATTCGGCCATCTTTGCTCCT 20 V_CEBP_Q3_M00770 TRANSFAC + 20661108 20661119 3.0E-06 ATGTTTGGCAAT 12 V_HMGIY_Q3_M01010 TRANSFAC - 20659236 20659250 4.0E-06 TTTTAAATTTTTTTG 15 V_HMGIY_Q3_M01010 TRANSFAC - 20659237 20659251 3.0E-06 TTTTTAAATTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 20659241 20659255 3.0E-06 AAATTTAAAAAGAAA 15 V_BCL6_01_M01183 TRANSFAC - 20659237 20659252 0.0E+00 CTTTTTAAATTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 20659238 20659253 4.0E-06 TCTTTTTAAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 20659239 20659254 8.0E-06 TTCTTTTTAAATTTTT 16 V_BCL6_01_M01183 TRANSFAC - 20659240 20659255 1.0E-06 TTTCTTTTTAAATTTT 16 V_BCL6_01_M01183 TRANSFAC - 20661182 20661197 9.0E-06 TTTTTCAGATAACTTT 16 V_GATA3_03_M00351 TRANSFAC + 20659735 20659744 3.0E-06 AAAGATTTTA 10 V_SPIB_02_M02041 TRANSFAC + 20659483 20659492 8.0E-06 AGAGGAAGTT 10 V_POU5F1_02_M02245 TRANSFAC - 20659564 20659578 1.0E-06 CCTTGACATGCAGAT 15 V_NFMUE1_Q6_M00651 TRANSFAC + 20658782 20658790 6.0E-06 CGGCCATCT 9 V_ISL2_01_M01328 TRANSFAC - 20658816 20658831 3.0E-06 ACCTACCAATTAAGAA 16 V_IRF2_Q6_M01882 TRANSFAC + 20659244 20659259 7.0E-06 TTTAAAAAGAAAGTTA 16 V_CEBP_C_M00201 TRANSFAC - 20659819 20659836 2.0E-06 AGACTGATGCAATATCCT 18 V_AP4_Q6_M00176 TRANSFAC + 20661078 20661087 5.0E-06 CACAGCTGGA 10 V_CEBP_Q2_M00190 TRANSFAC + 20659822 20659835 7.0E-06 ATATTGCATCAGTC 14 V_YY1_Q6_M00793 TRANSFAC + 20658784 20658792 7.0E-06 GCCATCTTT 9 V_PAX7_01_M01339 TRANSFAC - 20658814 20658830 6.0E-06 CCTACCAATTAAGAATG 17 V_CEBPB_01_M00109 TRANSFAC + 20661108 20661121 8.0E-06 ATGTTTGGCAATGG 14 V_PAX_Q6_M00808 TRANSFAC + 20658801 20658811 1.0E-05 CTGCAACTAAC 11 V_COMP1_01_M00057 TRANSFAC + 20660968 20660991 2.0E-06 CATGTTCATAGACCACGGGAAAGG 24 V_POU3F2_01_M00463 TRANSFAC - 20659736 20659749 7.0E-06 CTGCATAAAATCTT 14 V_SPI1_03_M02078 TRANSFAC + 20659483 20659492 2.0E-06 AGAGGAAGTT 10 V_SOX7_04_M02911 TRANSFAC + 20659719 20659740 5.0E-06 GTAGTAATAGTCATTGAAAGAT 22 V_NKX61_01_M00424 TRANSFAC + 20658816 20658828 1.0E-06 TTCTTAATTGGTA 13 V_CEBPD_Q6_M00621 TRANSFAC - 20659880 20659891 7.0E-06 CATTGCACCACT 12 V_NKX25_02_M00241 TRANSFAC + 20658818 20658825 7.0E-06 CTTAATTG 8 V_PMX2A_01_M01444 TRANSFAC + 20658814 20658829 1.0E-05 CATTCTTAATTGGTAG 16 V_HNF1_Q6_01_M01011 TRANSFAC + 20659240 20659260 6.0E-06 AAAATTTAAAAAGAAAGTTAG 21 V_ELF5_01_M01197 TRANSFAC + 20659482 20659492 1.0E-05 AAGAGGAAGTT 11 V_OCT1_04_M00138 TRANSFAC + 20659235 20659257 1.0E-06 ACAAAAAAATTTAAAAAGAAAGT 23 V_ZBRK1_01_M01105 TRANSFAC + 20659749 20659763 0.0E+00 GGGAAGCAGTCATTT 15 V_SPIB_01_M01204 TRANSFAC + 20659479 20659495 1.0E-06 AAGAAGAGGAAGTTTGG 17 V_NCX_02_M01420 TRANSFAC + 20659238 20659254 7.0E-06 AAAAAATTTAAAAAGAA 17 V_GATA5_04_M02860 TRANSFAC + 20659468 20659484 9.0E-06 GATTAAGATATAAGAAG 17 V_TBP_06_M02814 TRANSFAC - 20659238 20659253 4.0E-06 TCTTTTTAAATTTTTT 16 V_LIM1_01_M01418 TRANSFAC - 20658814 20658830 9.0E-06 CCTACCAATTAAGAATG 17 V_GATA4_Q3_M00632 TRANSFAC + 20659892 20659903 3.0E-06 AGATATGAGAGA 12 V_NEUROD_02_M01288 TRANSFAC - 20661077 20661088 4.0E-06 CTCCAGCTGTGC 12 V_ELF1_Q6_M00746 TRANSFAC + 20659480 20659491 0.0E+00 AGAAGAGGAAGT 12 V_MYOD_Q6_02_M02100 TRANSFAC + 20662329 20662337 4.0E-06 CAGCTGTCA 9 V_MTF1_06_M02882 TRANSFAC + 20659241 20659254 1.0E-05 AAATTTAAAAAGAA 14 V_BARHL1_01_M01332 TRANSFAC - 20658816 20658831 3.0E-06 ACCTACCAATTAAGAA 16 V_MSX1_02_M01412 TRANSFAC - 20658816 20658831 8.0E-06 ACCTACCAATTAAGAA 16 V_FPM315_01_M01587 TRANSFAC - 20658792 20658803 5.0E-06 CAGGGAGGAGCA 12 V_SPIC_02_M02077 TRANSFAC + 20659483 20659492 1.0E-06 AGAGGAAGTT 10 V_CEBPB_Q6_M01896 TRANSFAC - 20659823 20659832 5.0E-06 TGATGCAATA 10 V_IRF1_Q6_01_M01881 TRANSFAC - 20661120 20661133 6.0E-06 CATTTTCAGTTGCC 14 V_SRF_06_M02916 TRANSFAC + 20659243 20659259 3.0E-06 ATTTAAAAAGAAAGTTA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 20661168 20661185 1.0E-05 AGAAGTACGGAAGCAAAG 18 V_YY1_01_M00059 TRANSFAC + 20658808 20658824 8.0E-06 TAACTCCATTCTTAATT 17 V_BARHL2_01_M01446 TRANSFAC - 20658816 20658831 1.0E-06 ACCTACCAATTAAGAA 16 V_PIT1_Q6_M00802 TRANSFAC - 20659468 20659485 5.0E-06 TCTTCTTATATCTTAATC 18 V_OG2_02_M01441 TRANSFAC - 20658814 20658830 2.0E-06 CCTACCAATTAAGAATG 17 V_SPI1_02_M02043 TRANSFAC + 20659483 20659492 6.0E-06 AGAGGAAGTT 10 V_SPIB_03_M02076 TRANSFAC + 20659483 20659492 2.0E-06 AGAGGAAGTT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.