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MKS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54903 Meckel syndrome, type 1 chr17 - 56296166 - 56301966 56296666 Transcription Factor Binding Sites   Download all TFBS in the MKS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 56301888 56301898 0.0E+00 GATGACTCATC 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 56301888 56301898 2.0E-06 GATGAGTCATC 11 FOXA1_MA0148.1 JASPAR - 56295306 56295316 2.0E-06 TGTTTGCTTTT 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 56295300 56295316 2.0E-06 AACAATAAAAGCAAACA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 56297521 56297532 3.0E-06 ACCATAAATAGC 12 En1_MA0027.1 JASPAR - 56301950 56301960 2.0E-06 AAATAGTTTTC 11 RFX4_RFX_DBD_dimeric_16_1 SELEX + 56296636 56296651 4.0E-06 TGTTTTCCTGGCAACG 16 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX + 56296466 56296476 4.0E-06 AAGGACACAAA 11 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 56301808 56301816 3.0E-06 TATGTAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 56301808 56301816 4.0E-06 TATGTAAAT 9 EWSR1-FLI1_MA0149.1 JASPAR + 56301912 56301929 5.0E-06 GGGGGTGAGGAAGCAAAG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX + 56301806 56301819 9.0E-06 TGTATGTAAATTTT 14 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 56297521 56297532 1.0E-05 ACCATAAATAGC 12 POU2F2_POU_DBD_monomeric_11_1 SELEX + 56295420 56295430 5.0E-06 ATATGCAGATT 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 56301807 56301817 2.0E-06 GTATGTAAATT 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 56301808 56301816 4.0E-06 TATGTAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 56301808 56301816 5.0E-06 TATGTAAAT 9 Pax4_MA0068.1 JASPAR - 56301791 56301820 4.0E-06 TAAAATTTACATACAGTAAAATTCACTTAC 30 MEF2B_MADS_full_dimeric_12_1 SELEX + 56297521 56297532 2.0E-06 ACCATAAATAGC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 56296591 56296602 9.0E-06 TGACAGCTGCGA 12 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX + 56297329 56297345 5.0E-06 AGGACATGCTGTAACCT 17 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 56295300 56295309 3.0E-06 AACAATAAAA 10 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 56295383 56295391 8.0E-06 AAACCACAA 9 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 56296636 56296651 9.0E-06 CGTTGCCAGGAAAACA 16 POU3F3_POU_DBD_monomeric_13_1 SELEX + 56295419 56295431 9.0E-06 CATATGCAGATTT 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 56301806 56301818 1.0E-06 TGTATGTAAATTT 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 56295301 56295309 7.0E-06 ACAATAAAA 9 MEF2A_MA0052.1 JASPAR - 56297522 56297531 5.0E-06 CTATTTATGG 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 56295300 56295310 8.0E-06 AACAATAAAAG 11 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 56297290 56297305 8.0E-06 TGACATTCACAAGTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 56297290 56297305 1.0E-05 TGACTTGTGAATGTCA 16 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 56297533 56297542 9.0E-06 AATAAATGGT 10 RFX3_RFX_DBD_dimeric_15_1 SELEX - 56296637 56296651 4.0E-06 CGTTGCCAGGAAAAC 15 PRDM4_C2H2_full_monomeric_13_1 SELEX - 56301841 56301853 6.0E-06 TTTTAAGTACCCC 13 RFX2_RFX_DBD_dimeric_16_1 SELEX + 56296636 56296651 9.0E-06 TGTTTTCCTGGCAACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 56296636 56296651 9.0E-06 CGTTGCCAGGAAAACA 16 POU3F1_POU_DBD_monomeric_12_1 SELEX + 56295420 56295431 8.0E-06 ATATGCAGATTT 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 56301807 56301818 2.0E-06 GTATGTAAATTT 12 Stat3_MA0144.1 JASPAR - 56296639 56296648 7.0E-06 TGCCAGGAAA 10 JDP2_bZIP_full_dimeric_9_1 SELEX + 56301889 56301897 2.0E-06 ATGACTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 56301889 56301897 4.0E-06 ATGAGTCAT 9 SRF_MADS_full_dimeric_16_1 SELEX + 56295369 56295384 2.0E-06 TTCCCAGATAAGGAAA 16 POU2F1_POU_DBD_monomeric_12_1 SELEX + 56295419 56295430 8.0E-06 CATATGCAGATT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 56301806 56301817 3.0E-06 TGTATGTAAATT 12 HLF_MA0043.1 JASPAR - 56297502 56297513 9.0E-06 TGTTACACAACT 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 56296591 56296602 8.0E-06 TGACAGCTGCGA 12 RUNX1_MA0002.2 JASPAR - 56295383 56295393 3.0E-06 TCTTGTGGTTT 11 IRF3_IRF_full_trimeric_21_1 SELEX + 56295284 56295304 3.0E-06 TCTGAACAGAAAGAGAAACAA 21 IRF3_IRF_full_trimeric_21_1 SELEX + 56296365 56296385 9.0E-06 GGGGTACGGATAGTGAAAGAA 21 POU3F2_POU_DBD_monomeric_12_1 SELEX + 56295420 56295431 9.0E-06 ATATGCAGATTT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 56301807 56301818 2.0E-06 GTATGTAAATTT 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 56295304 56295316 7.0E-06 ATAAAAGCAAACA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 56295301 56295309 6.0E-06 ACAATAAAA 9 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 56301808 56301818 6.0E-06 TATGTAAATTT 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 56295301 56295309 6.0E-06 ACAATAAAA 9 V_FOXP1_01_M00987 TRANSFAC - 56295294 56295313 2.0E-06 TTGCTTTTATTGTTTCTCTT 20 V_FOXP3_Q4_M00992 TRANSFAC - 56296804 56296820 3.0E-06 GAGCTTTTATCGCATAC 17 V_GEN_INI_B_M00315 TRANSFAC - 56296849 56296856 1.0E-05 CCTCATTT 8 V_BCL6_Q3_01_M02085 TRANSFAC - 56297090 56297099 7.0E-06 CTTCCAAGAA 10 V_POU3F3_01_M03090 TRANSFAC - 56295416 56295432 3.0E-06 AAAATCTGCATATGATG 17 V_AR_02_M00953 TRANSFAC - 56295385 56295411 5.0E-06 TGTATAGATCAACTGTGTTCTTGTGGT 27 V_EVI1_05_M00082 TRANSFAC + 56297075 56297085 7.0E-06 AGACAAGAAAA 11 V_BACH2_01_M00490 TRANSFAC - 56301888 56301898 1.0E-06 GATGAGTCATC 11 V_SOX30_03_M02804 TRANSFAC + 56295296 56295311 1.0E-05 GAGAAACAATAAAAGC 16 V_NKX29_01_M01352 TRANSFAC + 56301838 56301854 5.0E-06 TGAGGGGTACTTAAAAT 17 V_AML3_Q6_M01856 TRANSFAC + 56295384 56295391 1.0E-05 AACCACAA 8 V_CBF_02_M01080 TRANSFAC - 56301896 56301911 6.0E-06 TTCAGTGTGGTTAGAT 16 V_OCT1_Q5_01_M00930 TRANSFAC - 56301808 56301818 3.0E-06 AAATTTACATA 11 V_MEF2_02_M00231 TRANSFAC + 56297515 56297536 3.0E-06 CGACTCACCATAAATAGCACCA 22 V_OCTAMER_01_M01324 TRANSFAC - 56295416 56295432 3.0E-06 AAAATCTGCATATGATG 17 V_IRF_Q6_01_M00972 TRANSFAC + 56295292 56295302 3.0E-06 GAAAGAGAAAC 11 V_SRY_02_M00160 TRANSFAC + 56295297 56295308 9.0E-06 AGAAACAATAAA 12 V_OCT1_01_M00135 TRANSFAC + 56301803 56301821 1.0E-06 TACTGTATGTAAATTTTAA 19 V_POU2F3_01_M01476 TRANSFAC + 56301805 56301820 1.0E-06 CTGTATGTAAATTTTA 16 V_HNF3_Q6_01_M01012 TRANSFAC - 56295304 56295321 6.0E-06 TAGTCTGTTTGCTTTTAT 18 V_STAT5B_01_M00459 TRANSFAC + 56297087 56297101 7.0E-06 ATATTCTTGGAAGAC 15 V_GATA_C_M00203 TRANSFAC + 56295374 56295384 3.0E-06 AGATAAGGAAA 11 V_AFP1_Q6_M00616 TRANSFAC + 56297524 56297534 5.0E-06 ATAAATAGCAC 11 V_BRN2_01_M00145 TRANSFAC - 56297536 56297551 7.0E-06 TAGATCCTAAATAAAT 16 V_AR_03_M00956 TRANSFAC - 56296431 56296457 1.0E-05 CCAACCTGAGCTCGGTGTTCTGAGGTC 27 V_TAL1_GATA1_01_M02243 TRANSFAC + 56295363 56295380 1.0E-05 TTTGGTTTCCCAGATAAG 18 V_AP1_Q6_M00174 TRANSFAC + 56301888 56301898 3.0E-06 GATGACTCATC 11 V_BACH1_01_M00495 TRANSFAC - 56301886 56301900 5.0E-06 TAGATGAGTCATCTA 15 V_SOX7_03_M02807 TRANSFAC + 56295293 56295314 0.0E+00 AAAGAGAAACAATAAAAGCAAA 22 V_GEN_INI3_B_M00314 TRANSFAC - 56296849 56296856 1.0E-05 CCTCATTT 8 V_HELIOSA_02_M01004 TRANSFAC + 56295376 56295386 1.0E-06 ATAAGGAAAAC 11 V_PR_01_M00954 TRANSFAC - 56295385 56295411 5.0E-06 TGTATAGATCAACTGTGTTCTTGTGGT 27 V_RUNX1_01_M02257 TRANSFAC - 56295383 56295393 3.0E-06 TCTTGTGGTTT 11 V_GFI1_01_M00250 TRANSFAC + 56295191 56295214 3.0E-06 AGAAAACAAATCTAATCTAATACA 24 V_AML2_01_M01759 TRANSFAC + 56295384 56295391 1.0E-05 AACCACAA 8 V_CEBPB_02_M00117 TRANSFAC - 56297501 56297514 9.0E-06 GTGTTACACAACTA 14 V_AP1_Q6_01_M00925 TRANSFAC + 56301889 56301897 4.0E-06 ATGACTCAT 9 V_HOXB9_01_M01426 TRANSFAC + 56295298 56295313 6.0E-06 GAAACAATAAAAGCAA 16 V_IK1_01_M00086 TRANSFAC - 56297034 56297046 7.0E-06 CTTTGGGAATAAT 13 V_EVI1_01_M00078 TRANSFAC - 56295198 56295213 4.0E-06 GTATTAGATTAGATTT 16 V_EVI1_01_M00078 TRANSFAC + 56297075 56297090 4.0E-06 AGACAAGAAAATATAT 16 V_MAZ_Q6_01_M02023 TRANSFAC - 56295345 56295358 3.0E-06 TGAGGAGGAGAGGA 14 V_HNF3_Q6_M00791 TRANSFAC + 56295306 56295318 1.0E-06 AAAAGCAAACAGA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 56295306 56295316 1.0E-06 TGTTTGCTTTT 11 V_IRF_Q6_M00772 TRANSFAC - 56295292 56295306 3.0E-06 TATTGTTTCTCTTTC 15 V_HNF1_Q6_01_M01011 TRANSFAC + 56301806 56301826 1.0E-05 TGTATGTAAATTTTAAGCTAT 21 V_MEF2_03_M00232 TRANSFAC - 56301808 56301829 6.0E-06 TAAATAGCTTAAAATTTACATA 22 V_NKX52_01_M01315 TRANSFAC + 56295297 56295313 8.0E-06 AGAAACAATAAAAGCAA 17 V_GLIS2_03_M02759 TRANSFAC - 56301835 56301850 6.0E-06 TAAGTACCCCTCACAA 16 V_JUNDM2_04_M02876 TRANSFAC + 56301885 56301900 0.0E+00 ATAGATGACTCATCTA 16 V_JUNDM2_04_M02876 TRANSFAC - 56301886 56301901 1.0E-06 TTAGATGAGTCATCTA 16 V_OCT1_04_M00138 TRANSFAC + 56301801 56301823 5.0E-06 TTTACTGTATGTAAATTTTAAGC 23 V_GR_01_M00955 TRANSFAC - 56295385 56295411 5.0E-06 TGTATAGATCAACTGTGTTCTTGTGGT 27 V_IK2_01_M00087 TRANSFAC - 56297035 56297046 1.0E-06 CTTTGGGAATAA 12 Tal1_Gata1_MA0140.1 JASPAR + 56295363 56295380 1.0E-05 TTTGGTTTCCCAGATAAG 18 V_EVI1_Q3_M02002 TRANSFAC - 56297076 56297084 6.0E-06 TTTCTTGTC 9 V_GR_Q6_M00192 TRANSFAC - 56295389 56295407 0.0E+00 TAGATCAACTGTGTTCTTG 19 V_ZBRK1_01_M01105 TRANSFAC + 56296274 56296288 1.0E-06 GGGGCACAGGGCTTT 15 V_MEF2_04_M00233 TRANSFAC + 56297515 56297536 9.0E-06 CGACTCACCATAAATAGCACCA 22 V_MEF2_04_M00233 TRANSFAC + 56301840 56301861 2.0E-06 AGGGGTACTTAAAATGGAATGC 22 V_GRE_C_M00205 TRANSFAC - 56297328 56297343 1.0E-06 GTTACAGCATGTCCTT 16 V_AP1_C_M00199 TRANSFAC - 56301889 56301897 8.0E-06 ATGAGTCAT 9 V_OCAB_Q6_M02113 TRANSFAC + 56295409 56295419 7.0E-06 ACATGCACATC 11 V_SRF_Q5_02_M01007 TRANSFAC - 56295368 56295386 9.0E-06 GTTTTCCTTATCTGGGAAA 19 V_AP1_01_M00517 TRANSFAC - 56301887 56301899 8.0E-06 AGATGAGTCATCT 13 V_STAT3_03_M01595 TRANSFAC - 56296635 56296650 1.0E-06 GTTGCCAGGAAAACAG 16 V_OCT_Q6_M00795 TRANSFAC - 56301808 56301818 3.0E-06 AAATTTACATA 11 V_ZFP691_04_M02937 TRANSFAC + 56301886 56301902 2.0E-06 TAGATGACTCATCTAAC 17 V_AP1_Q4_01_M00926 TRANSFAC - 56301889 56301896 1.0E-05 TGAGTCAT 8 V_MYOD_Q6_02_M02100 TRANSFAC - 56296591 56296599 4.0E-06 CAGCTGTCA 9 V_TAL1_01_M01591 TRANSFAC - 56295372 56295384 3.0E-06 TTTCCTTATCTGG 13 V_OCT2_01_M01368 TRANSFAC + 56301805 56301820 1.0E-06 CTGTATGTAAATTTTA 16 V_NKX3A_02_M01383 TRANSFAC + 56301838 56301854 4.0E-06 TGAGGGGTACTTAAAAT 17 V_CBF_01_M01079 TRANSFAC - 56295331 56295346 2.0E-06 GACAGAGTGGTTGTTG 16 V_GEN_INI2_B_M00313 TRANSFAC - 56296849 56296856 1.0E-05 CCTCATTT 8 V_AIRE_01_M00999 TRANSFAC + 56301824 56301849 3.0E-06 TATTTACCAGGTTGTGAGGGGTACTT 26 V_SMAD3_03_M02794 TRANSFAC + 56297068 56297084 2.0E-06 CTTAGCCAGACAAGAAA 17 V_FRA1_Q5_M01267 TRANSFAC - 56301889 56301896 1.0E-05 TGAGTCAT 8 V_SRF_01_M00152 TRANSFAC + 56295368 56295385 8.0E-06 TTTCCCAGATAAGGAAAA 18 V_FOX_Q2_M00809 TRANSFAC - 56295307 56295319 4.0E-06 GTCTGTTTGCTTT 13 V_ZABC1_01_M01306 TRANSFAC - 56296453 56296460 1.0E-05 ATTCCAAC 8 V_LMO2COM_02_M00278 TRANSFAC + 56295373 56295381 3.0E-06 CAGATAAGG 9 V_PLZF_02_M01075 TRANSFAC + 56301800 56301828 0.0E+00 TTTTACTGTATGTAAATTTTAAGCTATTT 29 V_OCT1_06_M00162 TRANSFAC - 56301806 56301819 1.0E-06 AAAATTTACATACA 14 V_OCT1_07_M00248 TRANSFAC + 56301806 56301817 0.0E+00 TGTATGTAAATT 12 V_IRF1_Q6_01_M01881 TRANSFAC - 56295291 56295304 3.0E-06 TTGTTTCTCTTTCT 14 V_SRF_02_M01257 TRANSFAC + 56295370 56295387 1.0E-06 TCCCAGATAAGGAAAACC 18 V_DMRT2_01_M01147 TRANSFAC + 56297525 56297540 7.0E-06 TAAATAGCACCATTTA 16 V_EWSR1FLI1_01_M02252 TRANSFAC + 56301912 56301929 5.0E-06 GGGGGTGAGGAAGCAAAG 18 V_FOXJ2_01_M00422 TRANSFAC + 56295304 56295321 2.0E-06 ATAAAAGCAAACAGACTA 18 V_NFE2_Q6_M02104 TRANSFAC + 56301888 56301903 2.0E-06 GATGACTCATCTAACC 16 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 56295383 56295390 1.0E-05 TGTGGTTT 8 V_YY1_01_M00059 TRANSFAC + 56297529 56297545 5.0E-06 TAGCACCATTTATTTAG 17 V_NFE2_01_M00037 TRANSFAC - 56301889 56301899 8.0E-06 AGATGAGTCAT 11 V_PIT1_Q6_M00802 TRANSFAC + 56296879 56296896 8.0E-06 ACTTCATATAGACAGATA 18 V_SRY_05_M02917 TRANSFAC + 56295294 56295310 1.0E-06 AAGAGAAACAATAAAAG 17 V_GATA5_03_M02756 TRANSFAC + 56295369 56295385 5.0E-06 TTCCCAGATAAGGAAAA 17 V_CEBP_Q2_01_M00912 TRANSFAC - 56295426 56295437 9.0E-06 CTTGCAAAATCT 12 V_CMAF_01_M01070 TRANSFAC + 56301882 56301900 9.0E-06 GTTATAGATGACTCATCTA 19 V_TAACC_B_M00331 TRANSFAC + 56295371 56295393 1.0E-05 CCCAGATAAGGAAAACCACAAGA 23 V_STAT1_05_M01260 TRANSFAC + 56297087 56297108 3.0E-06 ATATTCTTGGAAGACAAAAAAA 22 V_PAX4_04_M00380 TRANSFAC + 56295189 56295218 1.0E-05 AAAGAAAACAAATCTAATCTAATACACTCT 30 V_NF1_Q6_M00193 TRANSFAC + 56301958 56301975 8.0E-06 TTTTGGCTGAAAGCTGAA 9 V_NANOG_02_M01247 TRANSFAC + 56295293 56295312 1.0E-06 AAAGAGAAACAATAAAAGCA 20 V_NANOG_02_M01247 TRANSFAC + 56297092 56297111 5.0E-06 CTTGGAAGACAAAAAAAGTG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.