Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54886 lipid phosphate phosphatase-related protein type 1 chr9 + 103786030 - 103791530 103791030 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_16_1 SELEX + 103789267 103789282 1.0E-06 AACACTGTTTACTGTT 16 SOX10_HMG_full_dimeric_16_1 SELEX - 103789267 103789282 3.0E-06 AACAGTAAACAGTGTT 16 POU3F3_POU_DBD_monomeric_12_1 SELEX - 103787148 103787159 3.0E-06 ATGAATAAATAC 12 FOXA1_MA0148.1 JASPAR + 103789272 103789282 9.0E-06 TGTTTACTGTT 11 SOX9_HMG_full_dimeric_16_1 SELEX + 103789267 103789282 7.0E-06 AACACTGTTTACTGTT 16 SOX9_HMG_full_dimeric_16_1 SELEX - 103789267 103789282 2.0E-06 AACAGTAAACAGTGTT 16 POU3F2_POU_DBD_monomeric_13_1 SELEX - 103787148 103787160 7.0E-06 AATGAATAAATAC 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 103791030 103791042 1.0E-06 ATTAAACAAACAG 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 103788531 103788539 6.0E-06 TATTCAAAT 9 SOX8_HMG_DBD_dimeric_16_1 SELEX + 103789267 103789282 2.0E-06 AACACTGTTTACTGTT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX - 103789267 103789282 0.0E+00 AACAGTAAACAGTGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX + 103789267 103789282 8.0E-06 AACACTGTTTACTGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 103789267 103789282 4.0E-06 AACAGTAAACAGTGTT 16 POU2F3_POU_DBD_monomeric_9_1 SELEX - 103788531 103788539 6.0E-06 TATTCAAAT 9 TBP_MA0108.2 JASPAR - 103787012 103787026 9.0E-06 CTATAAATGGGAGTT 15 ZNF232_C2H2_full_monomeric_19_1 SELEX - 103787128 103787146 5.0E-06 TTGCCAAAAGTGAATTTAT 19 STAT1_MA0137.2 JASPAR + 103789322 103789336 9.0E-06 GCCTTCCAAGAAGCC 15 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 103788531 103788539 4.0E-06 TATTCAAAT 9 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 103788559 103788574 5.0E-06 CATCGCCCCCTCACTC 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 103791031 103791041 2.0E-06 TTAAACAAACA 11 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 103787150 103787164 3.0E-06 AGTAAATGAATAAAT 15 SP1_MA0079.2 JASPAR + 103790985 103790994 9.0E-06 CCCCTCCTCC 10 FOXI1_MA0042.1 JASPAR - 103789358 103789369 1.0E-05 GCCTGTTTATAT 12 FOXI1_MA0042.1 JASPAR - 103791033 103791044 5.0E-06 TCCTGTTTGTTT 12 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 103790833 103790849 6.0E-06 TGCCTTCTGGGAACCCC 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 103791031 103791041 1.0E-06 TTAAACAAACA 11 SOX7_HMG_full_dimeric_16_1 SELEX + 103789267 103789282 1.0E-05 AACACTGTTTACTGTT 16 SOX7_HMG_full_dimeric_16_1 SELEX - 103789267 103789282 0.0E+00 AACAGTAAACAGTGTT 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 103788511 103788527 4.0E-06 GCATGCTTTTCATTACA 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 103787146 103787162 1.0E-05 TAAATGAATAAATACAT 17 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 103787151 103787163 6.0E-06 GTAAATGAATAAA 13 POU3F1_POU_DBD_monomeric_12_2 SELEX - 103787148 103787159 7.0E-06 ATGAATAAATAC 12 SOX21_HMG_DBD_dimeric_16_1 SELEX + 103789267 103789282 9.0E-06 AACACTGTTTACTGTT 16 SOX21_HMG_DBD_dimeric_16_1 SELEX - 103789267 103789282 1.0E-06 AACAGTAAACAGTGTT 16 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 103787150 103787164 4.0E-06 AGTAAATGAATAAAT 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 103795268 103795279 8.0E-06 TTTAATATACAT 12 NRF1_NRF_full_dimeric_12_1 SELEX + 103790951 103790962 4.0E-06 TGAGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 103790951 103790962 3.0E-06 TGCGCATGCTCA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 103787149 103787161 3.0E-06 AAATGAATAAATA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 103791029 103791041 3.0E-06 CATTAAACAAACA 13 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 103787050 103787063 7.0E-06 TGATGAAGTCAGTA 14 NFIA_NFI_full_monomeric_10_1 SELEX - 103787138 103787147 9.0E-06 ATTGCCAAAA 10 V_MEQ_01_M02049 TRANSFAC + 103791216 103791224 7.0E-06 AACACACAC 9 V_CEBPG_Q6_M00622 TRANSFAC + 103787100 103787112 7.0E-06 TCTATTTCAAAGT 13 V_CEBPG_Q6_M00622 TRANSFAC + 103791027 103791039 5.0E-06 TTCATTAAACAAA 13 V_OBOX6_01_M01445 TRANSFAC - 103788610 103788624 5.0E-06 CAAAGCAGATTAAAG 15 V_KLF15_Q2_M01714 TRANSFAC - 103790980 103790993 7.0E-06 GAGGAGGGGAGAGG 14 V_DBX1_01_M01483 TRANSFAC - 103787149 103787165 4.0E-06 GAGTAAATGAATAAATA 17 V_FREAC7_01_M00293 TRANSFAC - 103787145 103787160 2.0E-06 AATGAATAAATACATT 16 V_BCL6_Q3_01_M02085 TRANSFAC + 103789324 103789333 7.0E-06 CTTCCAAGAA 10 V_APOLYA_B_M00310 TRANSFAC + 103795227 103795241 3.0E-06 TATAAATTCCCTTTT 15 V_XFD1_01_M00267 TRANSFAC - 103787145 103787158 6.0E-06 TGAATAAATACATT 14 V_NF1_Q6_01_M00806 TRANSFAC + 103789316 103789332 1.0E-05 TTGGATGCCTTCCAAGA 17 V_FOXJ1_04_M02854 TRANSFAC + 103789292 103789306 4.0E-06 ACGTGACAACAAGGC 15 V_NFAT3_Q3_M01734 TRANSFAC - 103788587 103788596 6.0E-06 AGTTTTTCCT 10 V_POU2F3_01_M01476 TRANSFAC - 103788527 103788542 6.0E-06 ATGTATTCAAATCCAT 16 V_POU1F1_Q6_M00744 TRANSFAC - 103787150 103787159 0.0E+00 ATGAATAAAT 10 V_HNF3_Q6_01_M01012 TRANSFAC + 103787144 103787161 5.0E-06 CAATGTATTTATTCATTT 18 V_SP1_03_M02281 TRANSFAC + 103790985 103790994 9.0E-06 CCCCTCCTCC 10 V_PU1_Q4_M01172 TRANSFAC + 103795231 103795249 5.0E-06 AATTCCCTTTTCCCCCTTT 19 V_GM497_04_M02864 TRANSFAC + 103791213 103791228 3.0E-06 ACAAACACACACTCGT 16 V_CEBPB_01_M00109 TRANSFAC + 103795276 103795289 9.0E-06 ACATTGTGAAAACT 14 V_HELIOSA_02_M01004 TRANSFAC + 103788584 103788594 6.0E-06 AGAAGGAAAAA 11 V_POU3F2_01_M00463 TRANSFAC + 103787146 103787159 0.0E+00 ATGTATTTATTCAT 14 V_POU3F2_01_M00463 TRANSFAC - 103787146 103787159 1.0E-06 ATGAATAAATACAT 14 V_HNF3G_Q4_M02015 TRANSFAC - 103791034 103791041 7.0E-06 TGTTTGTT 8 V_HNF1_Q6_M00790 TRANSFAC + 103787149 103787166 7.0E-06 TATTTATTCATTTACTCC 18 V_TATA_01_M00252 TRANSFAC - 103787012 103787026 9.0E-06 CTATAAATGGGAGTT 15 V_XFD3_01_M00269 TRANSFAC + 103791028 103791041 9.0E-06 TCATTAAACAAACA 14 V_HIC1_03_M01073 TRANSFAC + 103790618 103790635 1.0E-06 CTCGGTTGCCCGCAGGGT 18 V_KROX_Q6_M00982 TRANSFAC + 103790992 103791005 5.0E-06 TCCGCCCCCTCCGC 14 V_MAZ_Q6_01_M02023 TRANSFAC - 103790981 103790994 6.0E-06 GGAGGAGGGGAGAG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 103790984 103790997 4.0E-06 GGCGGAGGAGGGGA 14 V_HNF3_Q6_M00791 TRANSFAC - 103787147 103787159 2.0E-06 ATGAATAAATACA 13 V_HNF3_Q6_M00791 TRANSFAC + 103791031 103791043 2.0E-06 TTAAACAAACAGG 13 V_OCT1_05_M00161 TRANSFAC + 103788513 103788526 8.0E-06 ATGCTTTTCATTAC 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 103787149 103787159 6.0E-06 TATTTATTCAT 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 103791031 103791041 1.0E-06 TGTTTGTTTAA 11 V_OCT1_04_M00138 TRANSFAC - 103788524 103788546 4.0E-06 ACTGATGTATTCAAATCCATGTA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 103790993 103791003 1.0E-06 CCGCCCCCTCC 11 V_EVI1_Q3_M02002 TRANSFAC + 103795247 103795255 6.0E-06 TTTCTTGTC 9 V_NCX_02_M01420 TRANSFAC - 103787149 103787165 6.0E-06 GAGTAAATGAATAAATA 17 V_IK3_01_M00088 TRANSFAC + 103787066 103787078 7.0E-06 TATAAGGAATGCC 13 V_SRF_03_M01304 TRANSFAC - 103787016 103787028 8.0E-06 ATCTATAAATGGG 13 V_BLIMP1_Q6_M01066 TRANSFAC - 103787128 103787143 5.0E-06 CCAAAAGTGAATTTAT 16 V_BLIMP1_Q6_M01066 TRANSFAC - 103795228 103795243 3.0E-06 GGAAAAGGGAATTTAT 16 V_NKX23_01_M01457 TRANSFAC - 103788391 103788406 8.0E-06 CCTCAAGCACTTTTTG 16 V_TBP_01_M00471 TRANSFAC + 103795227 103795234 8.0E-06 TATAAATT 8 V_CEBPA_01_M00116 TRANSFAC - 103787136 103787149 9.0E-06 ACATTGCCAAAAGT 14 V_OCT1_Q6_M00195 TRANSFAC - 103786991 103787005 4.0E-06 AGAAAAGCAAATCAG 15 V_ZBTB4_04_M02929 TRANSFAC + 103788368 103788383 5.0E-06 TAATCACTGTGAGACA 16 V_SMAD3_03_M02794 TRANSFAC - 103788436 103788452 8.0E-06 CAAATCTAGACGTAAGT 17 V_ZFP206_01_M01742 TRANSFAC - 103790952 103790962 3.0E-06 TGCGCATGCTC 11 V_EGR1_06_M02744 TRANSFAC - 103788560 103788573 8.0E-06 ATCGCCCCCTCACT 14 V_HFH3_01_M00289 TRANSFAC - 103791032 103791044 2.0E-06 TCCTGTTTGTTTA 13 V_FOXJ2_01_M00422 TRANSFAC - 103787144 103787161 6.0E-06 AAATGAATAAATACATTG 18 V_FOXJ2_01_M00422 TRANSFAC + 103791029 103791046 8.0E-06 CATTAAACAAACAGGAGA 18 V_SOX18_04_M02905 TRANSFAC - 103787125 103787140 1.0E-06 AAAGTGAATTTATGTT 16 V_SOX18_04_M02905 TRANSFAC - 103787151 103787166 7.0E-06 GGAGTAAATGAATAAA 16 V_SOX1_03_M02802 TRANSFAC + 103787149 103787164 2.0E-06 TATTTATTCATTTACT 16 V_UF1H3BETA_Q6_M01068 TRANSFAC - 103790984 103790997 6.0E-06 GGCGGAGGAGGGGA 14 V_MAFK_04_M02880 TRANSFAC + 103788390 103788404 1.0E-05 GCAAAAAGTGCTTGA 15 V_OBOX6_02_M03068 TRANSFAC - 103788610 103788624 5.0E-06 CAAAGCAGATTAAAG 15 V_NF1_Q6_M00193 TRANSFAC - 103789315 103789332 8.0E-06 TCTTGGAAGGCATCCAAG 18 V_NANOG_02_M01247 TRANSFAC - 103786994 103787013 4.0E-06 TTGAGATGAGAAAAGCAAAT 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.