Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DYM Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54808 dymeclin chr18 - 46986579 - 46992079 46987079 Transcription Factor Binding Sites   Download all TFBS in the DYM promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 46986299 46986314 4.0E-06 GAGCATTTTTAATCAC 16 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 46987072 46987083 5.0E-06 GGTCACGTGGCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 46987072 46987083 2.0E-06 TGCCACGTGACC 12 IRF7_IRF_DBD_dimeric_14_1 SELEX + 46983320 46983333 3.0E-06 AGGAAAGTGAAACC 14 POU3F3_POU_DBD_monomeric_12_1 SELEX - 46987909 46987920 2.0E-06 ATGCATATATTT 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 46987909 46987921 2.0E-06 CATGCATATATTT 13 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 46991313 46991327 8.0E-06 CAATGAGCCAAATTA 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 46991313 46991327 6.0E-06 TAATTTGGCTCATTG 15 IRF8_IRF_full_dimeric_14_1 SELEX + 46983320 46983333 4.0E-06 AGGAAAGTGAAACC 14 POU3F4_POU_DBD_monomeric_11_1 SELEX - 46987909 46987919 7.0E-06 TGCATATATTT 11 SOX8_HMG_full_dimeric_15_1 SELEX + 46989979 46989993 6.0E-06 GACAACTTCAGTGTC 15 STAT1_MA0137.2 JASPAR - 46987934 46987948 9.0E-06 CATTTCCTGTAATGG 15 SOX8_HMG_DBD_dimeric_14_1 SELEX + 46987824 46987837 7.0E-06 GGAATTTGAAGTCA 14 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX - 46987350 46987361 2.0E-06 CAAACGATTATC 12 Sox1_HMG_DBD_dimeric_13_1 SELEX - 46991666 46991678 7.0E-06 TCACTAACATTCC 13 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 46987919 46987932 3.0E-06 AGAATCATCATCAT 14 IRF1_MA0050.1 JASPAR + 46983322 46983333 0.0E+00 GAAAGTGAAACC 12 HMX3_homeodomain_DBD_monomeric_11_1 SELEX - 46987641 46987651 5.0E-06 TGCAATTAACA 11 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 46987071 46987083 1.0E-06 TGCCACGTGACCA 13 NFIX_NFI_full_monomeric_9_2 SELEX + 46991308 46991316 8.0E-06 TATGCCAAT 9 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 46987941 46987954 9.0E-06 AGGAAATGTTGACA 14 SOX7_HMG_full_dimeric_17_1 SELEX + 46989978 46989994 1.0E-05 TGACAACTTCAGTGTCT 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 46987644 46987661 9.0E-06 GTTATTCAGCTGCAATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX - 46987907 46987923 5.0E-06 ATCATGCATATATTTTA 17 RFX5_RFX_DBD_dimeric_16_3 SELEX - 46991783 46991798 3.0E-06 CATTACCATAGCACCA 16 IRF9_IRF_full_trimeric_15_1 SELEX + 46983319 46983333 2.0E-06 TAGGAAAGTGAAACC 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 46987941 46987954 9.0E-06 AGGAAATGTTGACA 14 Evi1_MA0029.1 JASPAR + 46987343 46987356 3.0E-06 GAGACAGGATAATC 14 POU3F1_POU_DBD_monomeric_12_2 SELEX - 46987909 46987920 6.0E-06 ATGCATATATTT 12 FEV_MA0156.1 JASPAR + 46987940 46987947 1.0E-05 CAGGAAAT 8 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 46991312 46991328 9.0E-06 CCAATGAGCCAAATTAA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 46991312 46991328 6.0E-06 TTAATTTGGCTCATTGG 17 CREB3L1_bZIP_full_dimeric_14_1 SELEX - 46987071 46987084 1.0E-06 GTGCCACGTGACCA 14 SOX18_HMG_full_dimeric_15_3 SELEX + 46991796 46991810 9.0E-06 ATGAATTCCTTGCAA 15 CREB3L1_bZIP_full_dimeric_12_1 SELEX + 46987170 46987181 6.0E-06 AGCCACGTGGCG 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 46987170 46987181 7.0E-06 CGCCACGTGGCT 12 Sox11_HMG_DBD_dimeric_15_1 SELEX + 46989979 46989993 3.0E-06 GACAACTTCAGTGTC 15 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 46987822 46987831 8.0E-06 CAAATTCCAT 10 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 46987622 46987640 4.0E-06 TTAACCTTATTAAGGCCTC 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 46987622 46987640 3.0E-06 GAGGCCTTAATAAGGTTAA 19 IRF3_IRF_full_trimeric_21_1 SELEX + 46983314 46983334 3.0E-06 CTAAGTAGGAAAGTGAAACCC 21 NFIA_NFI_full_monomeric_10_1 SELEX + 46987810 46987819 5.0E-06 AGTGCCAAAA 10 NFE2L2_MA0150.1 JASPAR + 46991739 46991749 3.0E-06 ATGACTGAGCA 11 IRF2_MA0051.1 JASPAR + 46983321 46983338 0.0E+00 GGAAAGTGAAACCCACTA 18 SOX9_HMG_full_dimeric_17_1 SELEX + 46989978 46989994 6.0E-06 TGACAACTTCAGTGTCT 17 V_DMRT4_01_M01149 TRANSFAC + 46990020 46990032 1.0E-05 AATGTATGAAATC 13 V_CEBPG_Q6_M00622 TRANSFAC - 46987826 46987838 7.0E-06 TTGACTTCAAATT 13 V_TGIF_01_M00418 TRANSFAC - 46983305 46983315 8.0E-06 AGCTGTCAAAG 11 V_MEIS1_02_M01419 TRANSFAC - 46983304 46983319 3.0E-06 ACTTAGCTGTCAAAGT 16 V_DBX1_01_M01483 TRANSFAC + 46987714 46987730 8.0E-06 AAAATAATTTTTGATGG 17 V_USF_Q6_M00187 TRANSFAC + 46987073 46987082 2.0E-06 GTCACGTGGC 10 V_USF_Q6_M00187 TRANSFAC + 46987171 46987180 9.0E-06 GCCACGTGGC 10 V_USF_Q6_M00187 TRANSFAC - 46987171 46987180 9.0E-06 GCCACGTGGC 10 V_POU3F3_01_M03090 TRANSFAC + 46987910 46987926 2.0E-06 AATATATGCATGATGAT 17 V_EVI1_05_M00082 TRANSFAC + 46987344 46987354 8.0E-06 AGACAGGATAA 11 V_ZFP410_04_M02936 TRANSFAC - 46986279 46986295 3.0E-06 CCCCCCCGCCCCAAAGA 17 V_GATA2_02_M00348 TRANSFAC - 46983436 46983445 2.0E-06 AGTGATAAGA 10 V_NF1_Q6_01_M00806 TRANSFAC + 46987803 46987819 3.0E-06 ATGAGATAGTGCCAAAA 17 V_BCL6_01_M01183 TRANSFAC - 46987714 46987729 2.0E-06 CATCAAAAATTATTTT 16 V_MMEF2_Q6_M00405 TRANSFAC + 46986299 46986314 2.0E-06 GTGATTAAAAATGCTC 16 V_EBOX_Q6_01_M01034 TRANSFAC - 46987072 46987081 2.0E-06 CCACGTGACC 10 V_SPDEF_04_M02915 TRANSFAC - 46990045 46990060 8.0E-06 CAGGATATCCTATTGG 16 V_MAFB_03_M02879 TRANSFAC + 46987707 46987721 1.0E-06 AAATAGCAAAATAAT 15 V_DR4_Q2_M00965 TRANSFAC - 46986835 46986851 5.0E-06 CGACTTCTCCTGACCCC 17 V_OCTAMER_01_M01324 TRANSFAC + 46987910 46987926 2.0E-06 AATATATGCATGATGAT 17 V_IRF_Q6_01_M00972 TRANSFAC + 46983322 46983332 1.0E-06 GAAAGTGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC + 46983320 46983335 0.0E+00 AGGAAAGTGAAACCCA 16 V_POU1F1_Q6_M00744 TRANSFAC - 46987911 46987920 8.0E-06 ATGCATATAT 10 V_SOX11_04_M02899 TRANSFAC - 46987711 46987724 5.0E-06 AAAATTATTTTGCT 14 V_DLX2_01_M01468 TRANSFAC - 46987866 46987881 7.0E-06 GAAGTAATTGCTCAAA 16 V_HOXC6_01_M01406 TRANSFAC - 46987866 46987882 8.0E-06 TGAAGTAATTGCTCAAA 17 V_PITX2_Q6_M02114 TRANSFAC + 46987225 46987234 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC + 46986284 46986294 3.0E-06 GGGGCGGGGGG 11 V_E2A_Q2_M00804 TRANSFAC + 46986764 46986777 0.0E+00 CCACCTGTCTCAGC 14 V_SOX21_03_M02803 TRANSFAC + 46987710 46987725 9.0E-06 TAGCAAAATAATTTTT 16 V_CEBPB_01_M00109 TRANSFAC + 46987699 46987712 4.0E-06 GAATTGAGAAATAG 14 V_NKX62_Q2_M00489 TRANSFAC + 46987714 46987725 5.0E-06 AAAATAATTTTT 12 V_STAT4_Q4_M01666 TRANSFAC + 46990034 46990047 8.0E-06 TTCCACTAAATCCA 14 V_TGIF2_01_M01407 TRANSFAC - 46983304 46983319 1.0E-06 ACTTAGCTGTCAAAGT 16 V_TST1_01_M00133 TRANSFAC + 46986298 46986312 2.0E-06 GGTGATTAAAAATGC 15 V_MEIS2_01_M01488 TRANSFAC - 46983304 46983319 3.0E-06 ACTTAGCTGTCAAAGT 16 V_TGIF_02_M01346 TRANSFAC + 46983303 46983319 0.0E+00 GACTTTGACAGCTAAGT 17 V_GFI1_01_M00250 TRANSFAC - 46991665 46991688 9.0E-06 AGAACTCAAATCACTAACATTCCC 24 V_STAF_01_M00262 TRANSFAC - 46987681 46987702 7.0E-06 ATTCTCCAGAATCCCACACAAT 22 V_IRF2_01_M00063 TRANSFAC + 46983321 46983333 1.0E-06 GGAAAGTGAAACC 13 V_CEBPD_Q6_M00621 TRANSFAC + 46987873 46987884 8.0E-06 AATTACTTCACC 12 V_P53_03_M01651 TRANSFAC + 46991283 46991302 5.0E-06 GGGCATGATTAGACTTATTT 20 V_P53_03_M01651 TRANSFAC - 46991283 46991302 7.0E-06 AAATAAGTCTAATCATGCCC 20 V_HOXB6_01_M01460 TRANSFAC + 46987866 46987881 2.0E-06 TTTGAGCAATTACTTC 16 V_IRF3_Q3_M01279 TRANSFAC - 46983323 46983335 4.0E-06 TGGGTTTCACTTT 13 V_IRF_Q6_M00772 TRANSFAC - 46983322 46983336 1.0E-06 GTGGGTTTCACTTTC 15 V_ISRE_01_M00258 TRANSFAC - 46983320 46983334 1.0E-06 GGGTTTCACTTTCCT 15 V_OCT1_04_M00138 TRANSFAC - 46987906 46987928 6.0E-06 TCATCATCATGCATATATTTTAG 23 V_SP1SP3_Q4_M01219 TRANSFAC - 46986289 46986299 4.0E-06 CCGCCCCCCCC 11 V_HMX1_02_M01481 TRANSFAC - 46987638 46987654 9.0E-06 AGCTGCAATTAACAGAG 17 V_RREB1_01_M00257 TRANSFAC + 46986544 46986557 9.0E-06 CCCCAACTCCCAAC 14 V_PNR_01_M01650 TRANSFAC - 46987718 46987731 1.0E-05 TCCATCAAAAATTA 14 V_MAFK_Q3_M02022 TRANSFAC - 46983480 46983490 6.0E-06 TGACTCAGCTG 11 V_STAT4_Q5_M02117 TRANSFAC + 46987937 46987946 4.0E-06 TTACAGGAAA 10 V_STAF_02_M00264 TRANSFAC - 46987682 46987702 4.0E-06 ATTCTCCAGAATCCCACACAA 21 V_TGIF1_01_M03111 TRANSFAC + 46983303 46983319 0.0E+00 GACTTTGACAGCTAAGT 17 V_IRF7_01_M00453 TRANSFAC + 46983319 46983336 1.0E-06 TAGGAAAGTGAAACCCAC 18 V_BCL6B_04_M02844 TRANSFAC - 46986279 46986294 4.0E-06 CCCCCCGCCCCAAAGA 16 V_ELF1_Q6_M00746 TRANSFAC + 46987936 46987947 1.0E-06 ATTACAGGAAAT 12 V_LRH1_Q5_M01142 TRANSFAC - 46991805 46991816 1.0E-05 CTGGCCTTGCAA 12 V_MRG2_01_M01395 TRANSFAC - 46983304 46983319 4.0E-06 ACTTAGCTGTCAAAGT 16 V_HOXB8_01_M01451 TRANSFAC - 46987639 46987654 0.0E+00 AGCTGCAATTAACAGA 16 V_FOXL1_02_M02857 TRANSFAC + 46987709 46987724 7.0E-06 ATAGCAAAATAATTTT 16 V_LUN1_01_M00480 TRANSFAC + 46986271 46986287 8.0E-06 TACGAGCTTCTTTGGGG 17 V_FOXJ3_06_M02855 TRANSFAC + 46987708 46987724 4.0E-06 AATAGCAAAATAATTTT 17 V_GATA3_02_M00350 TRANSFAC - 46983436 46983445 6.0E-06 AGTGATAAGA 10 V_T3R_Q6_M00963 TRANSFAC - 46987772 46987780 7.0E-06 CCTGTCCTT 9 V_DELTAEF1_01_M00073 TRANSFAC + 46987900 46987910 9.0E-06 CCTCACCTAAA 11 V_GATA3_01_M00077 TRANSFAC + 46987805 46987813 1.0E-05 GAGATAGTG 9 V_NRF2_Q4_M00821 TRANSFAC - 46991738 46991750 2.0E-06 TTGCTCAGTCATT 13 V_SRF_01_M00152 TRANSFAC - 46991363 46991380 6.0E-06 AAGTTCTTATATGGAGCT 18 V_P53_04_M01652 TRANSFAC + 46991283 46991302 8.0E-06 GGGCATGATTAGACTTATTT 20 V_PITX2_Q2_M00482 TRANSFAC + 46987225 46987235 1.0E-06 TGTAATCCCAG 11 V_BARX2_01_M01431 TRANSFAC - 46987866 46987881 1.0E-05 GAAGTAATTGCTCAAA 16 V_ETS1_B_M00339 TRANSFAC + 46987939 46987953 7.0E-06 ACAGGAAATGTTGAC 15 V_IRF1_Q6_01_M01881 TRANSFAC - 46983321 46983334 2.0E-06 GGGTTTCACTTTCC 14 V_DMRT2_01_M01147 TRANSFAC - 46990018 46990033 8.0E-06 GGATTTCATACATTTT 16 V_GATA2_03_M00349 TRANSFAC - 46983436 46983445 5.0E-06 AGTGATAAGA 10 V_NFE2_Q6_M02104 TRANSFAC + 46991738 46991753 2.0E-06 AATGACTGAGCAAGCT 16 V_YY1_01_M00059 TRANSFAC + 46991362 46991378 8.0E-06 CAGCTCCATATAAGAAC 17 V_NFE2_01_M00037 TRANSFAC + 46983481 46983491 2.0E-06 AGCTGAGTCAC 11 V_IRF1_01_M00062 TRANSFAC + 46983321 46983333 6.0E-06 GGAAAGTGAAACC 13 V_BSX_01_M01442 TRANSFAC - 46987866 46987881 4.0E-06 GAAGTAATTGCTCAAA 16 V_NFE2L2_01_M02263 TRANSFAC + 46991739 46991749 3.0E-06 ATGACTGAGCA 11 V_MYCMAX_03_M00615 TRANSFAC + 46987068 46987087 1.0E-05 AGGTGGTCACGTGGCACGCG 20 V_MYCMAX_03_M00615 TRANSFAC - 46987068 46987087 1.0E-05 CGCGTGCCACGTGACCACCT 20 V_CP2_01_M00072 TRANSFAC - 46991887 46991897 6.0E-06 GCAATACCCAG 11 V_BARX1_01_M01340 TRANSFAC - 46987866 46987881 1.0E-06 GAAGTAATTGCTCAAA 16 V_ATF_B_M00338 TRANSFAC + 46987858 46987869 8.0E-06 CTGACGTCTTTG 12 V_FEV_01_M02269 TRANSFAC + 46987940 46987947 1.0E-05 CAGGAAAT 8 V_STAT1_Q6_M01823 TRANSFAC + 46987937 46987946 4.0E-06 TTACAGGAAA 10 V_PAX4_04_M00380 TRANSFAC - 46987696 46987725 2.0E-06 AAAAATTATTTTGCTATTTCTCAATTCTCC 30 V_NF1_Q6_M00193 TRANSFAC - 46987802 46987819 1.0E-05 TTTTGGCACTATCTCATA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.