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RAB39A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54734 RAB39A, member RAS oncogene family chr11 + 107794276 - 107799776 107799276 Transcription Factor Binding Sites   Download all TFBS in the RAB39A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 107798968 107798979 0.0E+00 GCCACGCCCACT 12 HSF2_HSF_DBD_trimeric_13_1 SELEX - 107799182 107799194 6.0E-06 TTCCAGCATATTC 13 NF-kappaB_MA0061.1 JASPAR + 107800683 107800692 6.0E-06 GGGACTTCCC 10 SP3_C2H2_DBD_monomeric_11_1 SELEX + 107798968 107798978 1.0E-06 GCCACGCCCAC 11 IRF7_IRF_DBD_dimeric_14_1 SELEX + 107799636 107799649 8.0E-06 TCGAAAGTGCAAAC 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 107798968 107798978 3.0E-06 GCCACGCCCAC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 107799087 107799097 1.0E-05 GCCCCGCCCCC 11 FOXA1_MA0148.1 JASPAR - 107799640 107799650 5.0E-06 TGTTTGCACTT 11 HSF1_HSF_full_trimeric_13_1 SELEX - 107799182 107799194 5.0E-06 TTCCAGCATATTC 13 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 107802116 107802127 9.0E-06 TCAGTAAACATT 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 107798967 107798980 1.0E-06 CGCCACGCCCACTT 14 FOXL1_forkhead_full_dimeric_13_1 SELEX - 107802117 107802129 8.0E-06 TGTCAGTAAACAT 13 FOXD1_MA0031.1 JASPAR - 107802117 107802124 7.0E-06 GTAAACAT 8 SOX8_HMG_full_dimeric_17_1 SELEX - 107800722 107800738 9.0E-06 TCTCATTCGCAGTGATG 17 NFYA_MA0060.1 JASPAR - 107798892 107798907 6.0E-06 GTCAGCCAATGAAAAG 16 Klf4_MA0039.2 JASPAR - 107798968 107798977 1.0E-05 TGGGCGTGGC 10 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 107799304 107799320 4.0E-06 ATCTGGATCTACCAGTT 17 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 107799304 107799320 4.0E-06 AACTGGTAGATCCAGAT 17 HSF4_HSF_DBD_trimeric_13_1 SELEX - 107799182 107799194 5.0E-06 TTCCAGCATATTC 13 SP1_MA0079.2 JASPAR + 107799088 107799097 7.0E-06 CCCCGCCCCC 10 Gfi_MA0038.1 JASPAR - 107799011 107799020 4.0E-06 CAAATCACTC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 107798965 107798981 2.0E-06 CCCGCCACGCCCACTTT 17 SP4_C2H2_full_monomeric_17_1 SELEX + 107799103 107799119 5.0E-06 GAGGCCCCGCCCCTAGC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 107798968 107798978 4.0E-06 GCCACGCCCAC 11 MZF1_5-13_MA0057.1 JASPAR - 107799060 107799069 4.0E-06 GGAGGGGGAA 10 INSM1_MA0155.1 JASPAR - 107800709 107800720 1.0E-05 TGGCTGGGGGCG 12 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 107798967 107798981 7.0E-06 CGCCACGCCCACTTT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 107798883 107798897 1.0E-06 GAAAAGTGAGAGTCG 15 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 107798954 107798969 9.0E-06 GCGGGAAGACGTGACA 16 V_NFKB_C_M00208 TRANSFAC + 107800682 107800693 0.0E+00 GGGGACTTCCCA 12 V_FOXP3_Q4_M00992 TRANSFAC + 107800797 107800813 1.0E-06 ATGATGCTGATTCATAG 17 V_IPF1_02_M01234 TRANSFAC + 107800814 107800823 7.0E-06 AGATAATGAG 10 V_NFKB_Q6_01_M00774 TRANSFAC - 107800682 107800697 2.0E-06 TGTTTGGGAAGTCCCC 16 V_DEC2_Q2_M01843 TRANSFAC - 107799284 107799293 9.0E-06 GCTCACGTGC 10 V_TCFE2A_04_M02927 TRANSFAC - 107799297 107799313 4.0E-06 AGATCCAGATGGTCTCC 17 TAL1_TCF3_MA0091.1 JASPAR + 107799299 107799310 7.0E-06 AGACCATCTGGA 12 V_TCF4_Q5_01_M02033 TRANSFAC + 107798795 107798804 3.0E-06 ATCAAAGCAA 10 V_SP1_Q6_01_M00931 TRANSFAC - 107799087 107799096 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 107799106 107799115 4.0E-06 GGGGCGGGGC 10 V_NFAT3_Q3_M01734 TRANSFAC + 107798931 107798940 3.0E-06 TCATTTTCCT 10 V_P50P50_Q3_M01223 TRANSFAC + 107800681 107800693 6.0E-06 AGGGGACTTCCCA 13 V_EAR2_Q2_M01728 TRANSFAC + 107799664 107799677 8.0E-06 TCCCCTTTGCCCCT 14 V_GABPA_04_M02858 TRANSFAC + 107799055 107799070 4.0E-06 CCTGCTTCCCCCTCCC 16 V_SP1_03_M02281 TRANSFAC + 107799088 107799097 7.0E-06 CCCCGCCCCC 10 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 107800680 107800691 7.0E-06 GGAAGTCCCCTC 12 V_SP1_02_M01303 TRANSFAC - 107799081 107799091 8.0E-06 GGGGCGGGGGC 11 V_PU1_Q4_M01172 TRANSFAC + 107799654 107799672 4.0E-06 CATTCTCGCTTCCCCTTTG 19 V_TAL1_GATA1_01_M02243 TRANSFAC + 107800803 107800820 7.0E-06 CTGATTCATAGAGATAAT 18 V_PPARGRXRA_01_M02262 TRANSFAC - 107799664 107799678 4.0E-06 GAGGGGCAAAGGGGA 15 V_WT1_Q6_01_M02036 TRANSFAC + 107799080 107799089 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC - 107799104 107799117 0.0E+00 TAGGGGCGGGGCCT 14 V_FREAC3_01_M00291 TRANSFAC - 107802114 107802129 9.0E-06 TGTCAGTAAACATTCC 16 V_TCFAP2C_03_M02821 TRANSFAC - 107798816 107798830 8.0E-06 AGTCCCTGAGGCCAT 15 V_IRF2_01_M00063 TRANSFAC - 107798885 107798897 2.0E-06 GAAAAGTGAGAGT 13 V_KROX_Q6_M00982 TRANSFAC + 107799078 107799091 2.0E-06 ACCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 107799089 107799102 5.0E-06 CCCGCCCCCGTCCA 14 V_NFKB_Q6_M00194 TRANSFAC + 107800681 107800694 3.0E-06 AGGGGACTTCCCAA 14 V_SP1_Q6_M00196 TRANSFAC - 107799086 107799098 2.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 107799105 107799117 2.0E-06 TAGGGGCGGGGCC 13 V_EGR1_Q6_M01873 TRANSFAC - 107799079 107799088 4.0E-06 GCGGGGGCGG 10 V_SFPI1_04_M02896 TRANSFAC + 107800617 107800630 1.0E-05 TCATTTAAGGAAGC 14 V_OCT1_04_M00138 TRANSFAC + 107800792 107800814 6.0E-06 TAGCAATGATGCTGATTCATAGA 23 Tal1_Gata1_MA0140.1 JASPAR + 107800803 107800820 7.0E-06 CTGATTCATAGAGATAAT 18 V_KLF7_03_M02773 TRANSFAC + 107799103 107799118 9.0E-06 GAGGCCCCGCCCCTAG 16 V_MAFK_Q3_M02022 TRANSFAC + 107800639 107800649 7.0E-06 TTAGTCAGCAA 11 V_AP1_01_M00517 TRANSFAC + 107800636 107800648 8.0E-06 GCGTTAGTCAGCA 13 V_MZF1_02_M00084 TRANSFAC - 107799060 107799072 1.0E-06 GTGGGAGGGGGAA 13 V_INSM1_01_M02268 TRANSFAC - 107800709 107800720 1.0E-05 TGGCTGGGGGCG 12 V_TAL1BETAITF2_01_M00070 TRANSFAC - 107799298 107799313 8.0E-06 AGATCCAGATGGTCTC 16 V_SP4_Q5_M01273 TRANSFAC + 107799082 107799092 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 107799087 107799097 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 107799106 107799116 8.0E-06 GCCCCGCCCCT 11 V_GFI1_Q6_M01067 TRANSFAC + 107798833 107798845 8.0E-06 CAAAATCAGAGCC 13 V_ALPHACP1_01_M00687 TRANSFAC - 107798895 107798905 1.0E-05 CAGCCAATGAA 11 V_GATA3_02_M00350 TRANSFAC + 107800812 107800821 1.0E-05 AGAGATAATG 10 V_T3R_Q6_M00963 TRANSFAC - 107799225 107799233 3.0E-06 ACTGTCCTT 9 V_ZBTB4_04_M02929 TRANSFAC - 107802121 107802136 5.0E-06 GACTCACTGTCAGTAA 16 V_NFY_01_M00287 TRANSFAC - 107798892 107798907 4.0E-06 GTCAGCCAATGAAAAG 16 V_FOX_Q2_M00809 TRANSFAC + 107802115 107802127 5.0E-06 GAATGTTTACTGA 13 V_NFKAPPAB_01_M00054 TRANSFAC + 107800683 107800692 7.0E-06 GGGACTTCCC 10 V_HSF2_02_M01244 TRANSFAC + 107799182 107799194 8.0E-06 GAATATGCTGGAA 13 V_FOXJ2_01_M00422 TRANSFAC - 107802113 107802130 8.0E-06 CTGTCAGTAAACATTCCC 18 V_HOXB3_01_M01330 TRANSFAC + 107800812 107800828 6.0E-06 AGAGATAATGAGTGAAC 17 V_SP1_Q2_01_M00933 TRANSFAC + 107799088 107799097 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 107799107 107799116 7.0E-06 CCCCGCCCCT 10 V_CMAF_01_M01070 TRANSFAC + 107800796 107800814 9.0E-06 AATGATGCTGATTCATAGA 19 V_NFYA_Q5_M02106 TRANSFAC - 107798892 107798905 2.0E-06 CAGCCAATGAAAAG 14 V_SP1_Q4_01_M00932 TRANSFAC - 107799086 107799098 3.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 107799105 107799117 3.0E-06 TAGGGGCGGGGCC 13 V_GFI1_Q6_01_M02010 TRANSFAC - 107798834 107798843 4.0E-06 CTCTGATTTT 10 PPARG_RXRA_MA0065.2 JASPAR - 107799664 107799678 4.0E-06 GAGGGGCAAAGGGGA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.