TFBS - View Gene

RRN3

Entrez	Description	Chrom.	Strand	Promoter (Start - Stop)	TSS
54700	RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	chr16	-	15187658 - 15193158	15188158

Transcription Factor Binding Sites

Download all TFBS in the RRN3 promoter

Motif	Source	Strand	Start	Stop	PValue	Match Sequence	Overlap w/ Footprints
ELF4_ETS_full_monomeric_12_1	SELEX	+	15188157	15188168	8.0E-06	GTCCCGGAAGTT	12
NFYA_MA0060.1	JASPAR	+	15188187	15188202	0.0E+00	TTCAGCCAATCAGCGG	16
Klf4_MA0039.2	JASPAR	-	15187817	15187826	5.0E-06	TGGGTGGGGC	10
RARG_nuclearreceptor_full_dimeric_18_1	SELEX	-	15187865	15187882	5.0E-06	AGGGTCATCTCACGTTCA	18
Tcfcp2l1_MA0145.1	JASPAR	+	15188327	15188340	4.0E-06	CCGGCTCCATCCAG	14
HOXD8_homeodomain_DBD_monomeric_10_1	SELEX	-	15188410	15188419	4.0E-06	AAAAATTAAC	10
V_ELF5_02_M01980	TRANSFAC	+	15188159	15188168	5.0E-06	CCCGGAAGTT	10
V_DBX1_01_M01483	TRANSFAC	-	15188405	15188421	3.0E-06	CAAAAAATTAACACTTG	17
V_BTEB3_Q5_M01865	TRANSFAC	-	15188428	15188440	5.0E-06	CTGAGGGAGGCTT	13
V_STAT3STAT3_Q3_M01220	TRANSFAC	-	15188050	15188063	6.0E-06	TTGCCGGGAGATGC	14
V_ELF1_01_M01975	TRANSFAC	+	15188159	15188168	8.0E-06	CCCGGAAGTT	10
V_GKLF_02_M01588	TRANSFAC	+	15187817	15187828	8.0E-06	GCCCCACCCATG	12
V_NFY_Q6_01_M00775	TRANSFAC	+	15188186	15188198	2.0E-06	CTTCAGCCAATCA	13
V_STAT4_Q4_M01666	TRANSFAC	-	15187855	15187868	5.0E-06	TTCACAGAAATGAG	14
V_BARBIE_01_M00238	TRANSFAC	-	15187920	15187934	7.0E-06	ATTGAAAGGATGTGG	15
V_ELF2_02_M02054	TRANSFAC	+	15188159	15188168	4.0E-06	CCCGGAAGTT	10
V_NFY_C_M00209	TRANSFAC	-	15188187	15188200	2.0E-06	GCTGATTGGCTGAA	14
V_HNF4_01_B_M00411	TRANSFAC	-	15187908	15187922	3.0E-06	TGGGACAAAGCTCAT	15
V_NKX26_01_M01322	TRANSFAC	+	15188456	15188471	9.0E-06	TGAAGCACTTGTGACT	16
V_TTF1_Q6_M00794	TRANSFAC	+	15188401	15188412	0.0E+00	CACTCAAGTGTT	12
V_NKX22_02_M01372	TRANSFAC	-	15188399	15188415	7.0E-06	ATTAACACTTGAGTGTA	17
V_EHF_02_M01974	TRANSFAC	+	15188159	15188168	8.0E-06	CCCGGAAGTT	10
V_AHRARNT_02_M00237	TRANSFAC	+	15188164	15188182	6.0E-06	AAGTTGCGCGTGCCAGCGC	19
V_ERBETA_Q5_M01875	TRANSFAC	+	15188464	15188478	4.0E-06	TTGTGACTGACCCAG	15
V_HNF4_DR1_Q3_M00764	TRANSFAC	+	15187909	15187921	2.0E-06	TGAGCTTTGTCCC	13
V_ELF4_01_M01979	TRANSFAC	+	15188159	15188168	8.0E-06	CCCGGAAGTT	10
V_CAAT_01_M00254	TRANSFAC	+	15188187	15188198	1.0E-06	TTCAGCCAATCA	12
V_ALPHACP1_01_M00687	TRANSFAC	+	15188189	15188199	1.0E-06	CAGCCAATCAG	11
V_TTF1_Q5_M02034	TRANSFAC	-	15188400	15188413	5.0E-06	TAACACTTGAGTGT	14
V_LBP9_01_M01592	TRANSFAC	-	15188324	15188340	8.0E-06	CTGGATGGAGCCGGTCC	17
V_NFYC_Q5_M02107	TRANSFAC	+	15188189	15188202	0.0E+00	CAGCCAATCAGCGG	14
V_EHF_06_M02745	TRANSFAC	+	15188155	15188169	7.0E-06	CTGTCCCGGAAGTTG	15
V_DR1_Q3_M00762	TRANSFAC	-	15187909	15187921	3.0E-06	GGGACAAAGCTCA	13
V_NFY_01_M00287	TRANSFAC	+	15188187	15188202	0.0E+00	TTCAGCCAATCAGCGG	16
V_NKX22_01_M00485	TRANSFAC	-	15188458	15188467	1.0E-05	ACAAGTGCTT	10
V_TITF1_Q3_M00432	TRANSFAC	+	15188402	15188411	1.0E-06	ACTCAAGTGT	10
V_HNF1A_Q5_M02013	TRANSFAC	+	15188409	15188419	2.0E-06	TGTTAATTTTT	11
V_PAX4_02_M00377	TRANSFAC	-	15188410	15188420	1.0E-06	AAAAAATTAAC	11
V_NFYA_Q5_M02106	TRANSFAC	+	15188189	15188202	0.0E+00	CAGCCAATCAGCGG	14
V_PPARA_01_M00242	TRANSFAC	-	15187909	15187928	9.0E-06	AGGATGTGGGACAAAGCTCA	20
V_PAX6_01_M00097	TRANSFAC	-	15188398	15188418	3.0E-06	AAAATTAACACTTGAGTGTAC	21

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