Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PPEF2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
5470 chr4 +76818681 - 76828681 0

Transcription Factor Binding Sites

 
Download all TFBS in the PPEF2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 76822744 76822759 0.0E+00 AAACTTCATAAGGTCA 16
SPIC_ETS_full_monomeric_14_1 SELEX + 76822697 76822710 0.0E+00 AGAAAGGGGAAGTA 14
EBF1_EBF_full_dimeric_14_1 SELEX + 76822716 76822729 8.0E-06 ATTCTCAAGGGAAA 14
EBF1_EBF_full_dimeric_14_1 SELEX - 76822716 76822729 6.0E-06 TTTCCCTTGAGAAT 14
ZNF435_C2H2_full_dimeric_18_1 SELEX + 76822791 76822808 7.0E-06 ATTGTTGAATCAGCACCT 18
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 76823068 76823079 2.0E-06 TGATTGCACTTA 12
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 76823068 76823079 1.0E-06 TAAGTGCAATCA 12
MAFF_bZIP_DBD_dimeric_15_1 SELEX + 76822792 76822806 3.0E-06 TTGTTGAATCAGCAC 15
MAFF_bZIP_DBD_dimeric_15_1 SELEX - 76822792 76822806 1.0E-06 GTGCTGATTCAACAA 15
SPIB_ETS_DBD_monomeric_14_1 SELEX + 76822680 76822693 6.0E-06 AAAAAAAGGAAATG 14
SPIB_ETS_DBD_monomeric_14_1 SELEX + 76822697 76822710 0.0E+00 AGAAAGGGGAAGTA 14
HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 76822961 76822970 9.0E-06 AAAAATTAGC 10
Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 76822816 76822829 6.0E-06 AAGACAGCTGGTGA 14
Mafb_bZIP_DBD_dimeric_17_1 SELEX + 76822791 76822807 1.0E-05 ATTGTTGAATCAGCACC 17
Mafb_bZIP_DBD_dimeric_17_1 SELEX - 76822791 76822807 3.0E-06 GGTGCTGATTCAACAAT 17
MAFK_bZIP_full_dimeric_15_1 SELEX + 76822792 76822806 8.0E-06 TTGTTGAATCAGCAC 15
MAFK_bZIP_full_dimeric_15_1 SELEX - 76822792 76822806 2.0E-06 GTGCTGATTCAACAA 15
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 76822955 76822965 8.0E-06 AAAAACAAAAA 11
MAFK_bZIP_DBD_dimeric_21_1 SELEX + 76822789 76822809 1.0E-06 AGATTGTTGAATCAGCACCTT 21
MAFK_bZIP_DBD_dimeric_21_1 SELEX - 76822789 76822809 1.0E-06 AAGGTGCTGATTCAACAATCT 21
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 76822697 76822711 8.0E-06 AGAAAGGGGAAGTAG 15
MAFG_bZIP_full_dimeric_21_1 SELEX + 76822789 76822809 2.0E-06 AGATTGTTGAATCAGCACCTT 21
MAFG_bZIP_full_dimeric_21_1 SELEX - 76822789 76822809 1.0E-06 AAGGTGCTGATTCAACAATCT 21
Myf_MA0055.1 JASPAR - 76822817 76822828 7.0E-06 AGACAGCTGGTG 12
LHX6_homeodomain_full_dimeric_12_1 SELEX + 76823068 76823079 0.0E+00 TGATTGCACTTA 12
LHX6_homeodomain_full_dimeric_12_1 SELEX - 76823068 76823079 2.0E-06 TAAGTGCAATCA 12
SPI1_ETS_full_monomeric_14_1 SELEX + 76822697 76822710 0.0E+00 AGAAAGGGGAAGTA 14
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 76822674 76822686 6.0E-06 AAAAAAAAAAAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 76822955 76822967 8.0E-06 AAAAACAAAAATT 13
RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 76822745 76822759 3.0E-06 AACTTCATAAGGTCA 15
V_FOXP1_01_M00987 TRANSFAC - 76822675 76822694 4.0E-06 TCATTTCCTTTTTTTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC - 76822949 76822968 1.0E-06 TAATTTTTGTTTTTCATGAT 20
V_SPI1_01_M01203 TRANSFAC + 76822697 76822713 0.0E+00 AGAAAGGGGAAGTAGAA 17
V_TCF3_01_M01594 TRANSFAC - 76822676 76822688 5.0E-06 CCTTTTTTTTTTT 13
V_TCF3_01_M01594 TRANSFAC - 76822953 76822965 1.0E-06 TTTTTGTTTTTCA 13
V_EBF_Q6_M00977 TRANSFAC - 76822718 76822728 0.0E+00 TTCCCTTGAGA 11
V_EVI1_04_M00081 TRANSFAC + 76822677 76822691 9.0E-06 AAAAAAAAAAGGAAA 15
V_BCL6_01_M01183 TRANSFAC - 76822676 76822691 1.0E-06 TTTCCTTTTTTTTTTT 16
V_SPIB_02_M02041 TRANSFAC + 76822701 76822710 2.0E-06 AGGGGAAGTA 10
V_IK_Q5_M01169 TRANSFAC + 76822564 76822573 3.0E-06 TTTGGGAGGC 10
V_SRY_02_M00160 TRANSFAC + 76822955 76822966 5.0E-06 AAAAACAAAAAT 12
V_IRF2_Q6_M01882 TRANSFAC + 76822680 76822695 6.0E-06 AAAAAAAGGAAATGAA 16
V_FOXJ1_03_M02750 TRANSFAC + 76822952 76822967 6.0E-06 ATGAAAAACAAAAATT 16
V_PU1_Q4_M01172 TRANSFAC - 76822681 76822699 0.0E+00 TCTGTTCATTTCCTTTTTT 19
V_PU1_Q4_M01172 TRANSFAC - 76822698 76822716 0.0E+00 TTATTCTACTTCCCCTTTC 19
V_LYF1_01_M00141 TRANSFAC + 76822564 76822572 9.0E-06 TTTGGGAGG 9
V_TCFAP2E_04_M02926 TRANSFAC + 76822668 76822681 6.0E-06 CACCTCAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 76822669 76822682 1.0E-06 ACCTCAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 76822671 76822684 2.0E-06 CTCAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 76822672 76822685 3.0E-06 TCAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 76822673 76822686 2.0E-06 CAAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 76822674 76822687 4.0E-06 AAAAAAAAAAAAAG 14
V_CDX_Q5_M00991 TRANSFAC + 76822678 76822695 1.0E-05 AAAAAAAAAGGAAATGAA 18
V_SPIC_01_M02042 TRANSFAC + 76822701 76822710 5.0E-06 AGGGGAAGTA 10
V_ELF4_04_M02850 TRANSFAC + 76822669 76822685 1.0E-05 ACCTCAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC + 76822670 76822686 0.0E+00 CCTCAAAAAAAAAAAAA 17
V_SOX13_03_M02797 TRANSFAC + 76822953 76822968 8.0E-06 TGAAAAACAAAAATTA 16
V_SOX7_03_M02807 TRANSFAC + 76822951 76822972 4.0E-06 CATGAAAAACAAAAATTAGCTA 22
V_MYF_01_M01302 TRANSFAC - 76822817 76822828 7.0E-06 AGACAGCTGGTG 12
V_SPI1_03_M02078 TRANSFAC + 76822701 76822710 6.0E-06 AGGGGAAGTA 10
V_ZFP105_03_M02827 TRANSFAC + 76822671 76822685 1.0E-06 CTCAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 76822672 76822686 2.0E-06 TCAAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 76822673 76822687 1.0E-06 CAAAAAAAAAAAAAG 15
V_ZFP105_03_M02827 TRANSFAC + 76822674 76822688 2.0E-06 AAAAAAAAAAAAAGG 15
V_ZFP105_03_M02827 TRANSFAC + 76822675 76822689 1.0E-06 AAAAAAAAAAAAGGA 15
V_ZFP105_03_M02827 TRANSFAC + 76822951 76822965 9.0E-06 CATGAAAAACAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 76822954 76822968 2.0E-06 GAAAAACAAAAATTA 15
V_HNF3_Q6_M00791 TRANSFAC + 76822955 76822967 4.0E-06 AAAAACAAAAATT 13
V_MATH1_Q2_M01716 TRANSFAC - 76822817 76822826 6.0E-06 ACAGCTGGTG 10
V_ELF5_01_M01197 TRANSFAC + 76822683 76822693 6.0E-06 AAAAGGAAATG 11
V_OCT1_04_M00138 TRANSFAC + 76822944 76822966 1.0E-06 ACATTATCATGAAAAACAAAAAT 23
V_SPIB_01_M01204 TRANSFAC + 76822697 76822713 1.0E-06 AGAAAGGGGAAGTAGAA 17
V_OCT4_02_M01124 TRANSFAC - 76822945 76822959 4.0E-06 TTTTTCATGATAATG 15
V_SOX11_03_M02795 TRANSFAC + 76822953 76822969 1.0E-05 TGAAAAACAAAAATTAG 17
V_FOXO1_Q5_M01216 TRANSFAC + 76822955 76822963 1.0E-06 AAAAACAAA 9
V_MAF_Q6_01_M00983 TRANSFAC - 76822795 76822805 6.0E-06 TGCTGATTCAA 11
V_ELF1_Q6_M00746 TRANSFAC + 76822698 76822709 1.0E-05 GAAAGGGGAAGT 12
V_MYOD_Q6_02_M02100 TRANSFAC + 76822820 76822828 8.0E-06 CAGCTGTCT 9
V_MTF1_06_M02882 TRANSFAC + 76822673 76822686 8.0E-06 CAAAAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC + 76822674 76822687 1.0E-06 AAAAAAAAAAAAAG 14
V_MTF1_06_M02882 TRANSFAC + 76822675 76822688 6.0E-06 AAAAAAAAAAAAGG 14
V_FAC1_01_M00456 TRANSFAC + 76822952 76822965 6.0E-06 ATGAAAAACAAAAA 14
V_SPIC_02_M02077 TRANSFAC + 76822701 76822710 9.0E-06 AGGGGAAGTA 10
V_SRF_06_M02916 TRANSFAC + 76822670 76822686 0.0E+00 CCTCAAAAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 76822671 76822687 1.0E-06 CTCAAAAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC + 76822672 76822688 3.0E-06 TCAAAAAAAAAAAAAGG 17
V_SRF_06_M02916 TRANSFAC + 76822673 76822689 0.0E+00 CAAAAAAAAAAAAAGGA 17
V_SRF_06_M02916 TRANSFAC + 76822674 76822690 1.0E-06 AAAAAAAAAAAAAGGAA 17
V_SRF_06_M02916 TRANSFAC + 76822951 76822967 5.0E-06 CATGAAAAACAAAAATT 17
V_SRF_06_M02916 TRANSFAC + 76822952 76822968 1.0E-06 ATGAAAAACAAAAATTA 17
V_SOX2_Q6_M01272 TRANSFAC - 76822954 76822969 4.0E-06 CTAATTTTTGTTTTTC 16
V_IRF1_01_M00062 TRANSFAC + 76822954 76822966 5.0E-06 GAAAAACAAAAAT 13
V_CMAF_01_M01070 TRANSFAC - 76822792 76822810 9.0E-06 AAAGGTGCTGATTCAACAA 19
V_SMAD1_01_M01590 TRANSFAC + 76822955 76822966 7.0E-06 AAAAACAAAAAT 12
V_SPI1_02_M02043 TRANSFAC + 76822701 76822710 3.0E-06 AGGGGAAGTA 10
V_NANOG_02_M01247 TRANSFAC + 76822674 76822693 3.0E-06 AAAAAAAAAAAAAGGAAATG 20
V_OCT4_01_M01125 TRANSFAC + 76822945 76822959 3.0E-06 CATTATCATGAAAAA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL