Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

DDX56


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
54606 DEAD (Asp-Glu-Ala-Asp) box helicase 56 chr7 -44613637 - 44619137 44614137

Transcription Factor Binding Sites

 
Download all TFBS in the DDX56 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR + 44613598 44613608 4.0E-06 CCGGAAGTGCT 11
SOX9_HMG_full_dimeric_16_1 SELEX - 44616020 44616035 6.0E-06 AAGAGTTTTCAGTATT 16
ELF4_ETS_full_monomeric_12_1 SELEX + 44613595 44613606 2.0E-06 TTCCCGGAAGTG 12
STAT1_MA0137.2 JASPAR + 44613592 44613606 1.0E-06 CACTTCCCGGAAGTG 15
NFYA_MA0060.1 JASPAR + 44613564 44613579 2.0E-06 AACAACCAATCGGCTT 16
TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 44615943 44615953 8.0E-06 AGCCTCAGGCC 11
ELF3_ETS_full_monomeric_13_1 SELEX + 44613595 44613607 7.0E-06 TTCCCGGAAGTGC 13
Stat3_MA0144.1 JASPAR - 44613594 44613603 3.0E-06 TTCCGGGAAG 10
EHF_ETS_full_monomeric_12_1 SELEX + 44613595 44613606 5.0E-06 TTCCCGGAAGTG 12
ELF1_ETS_full_monomeric_12_1 SELEX + 44613595 44613606 4.0E-06 TTCCCGGAAGTG 12
Tp53_p53l_DBD_dimeric_17_1 SELEX + 44615954 44615970 9.0E-06 AGAAGTCCACAACATGT 17
ELF3_ETS_DBD_monomeric_12_1 SELEX + 44613595 44613606 3.0E-06 TTCCCGGAAGTG 12
V_TEL1_02_M02070 TRANSFAC + 44613597 44613606 5.0E-06 CCCGGAAGTG 10
V_STAT3_01_M00225 TRANSFAC + 44613589 44613609 0.0E+00 AGTCACTTCCCGGAAGTGCTG 21
V_STAT3_01_M00225 TRANSFAC - 44613589 44613609 0.0E+00 CAGCACTTCCGGGAAGTGACT 21
V_ELK1_04_M01165 TRANSFAC - 44613618 44613628 7.0E-06 TACCGGAAGCC 11
V_FLI1_Q6_M01208 TRANSFAC + 44613598 44613608 9.0E-06 CCGGAAGTGCT 11
V_OBOX5_05_M03066 TRANSFAC - 44615926 44615942 9.0E-06 CTTGGGGATTATGTGAC 17
V_SREBP2_Q6_M01177 TRANSFAC - 44613286 44613297 5.0E-06 AGGCCATCCCAC 12
V_NERF_01_M01976 TRANSFAC + 44613597 44613606 9.0E-06 CCCGGAAGTG 10
V_GABP_B_M00341 TRANSFAC + 44613597 44613608 4.0E-06 CCCGGAAGTGCT 12
V_GTF2IRD1_01_M01229 TRANSFAC - 44615930 44615938 3.0E-06 GGGATTATG 9
V_ELF2_02_M02054 TRANSFAC + 44613597 44613606 8.0E-06 CCCGGAAGTG 10
V_TRF1_01_M01237 TRANSFAC + 44613856 44613870 3.0E-06 TTAGGGTTAGTGTCC 15
V_OBOX5_02_M01480 TRANSFAC - 44615926 44615942 9.0E-06 CTTGGGGATTATGTGAC 17
V_RFX1_01_M00280 TRANSFAC + 44613552 44613568 7.0E-06 CGGGAGCAAAGCAACAA 17
V_STAT1_01_M00224 TRANSFAC + 44613589 44613609 2.0E-06 AGTCACTTCCCGGAAGTGCTG 21
V_STAT1_01_M00224 TRANSFAC - 44613589 44613609 0.0E+00 CAGCACTTCCGGGAAGTGACT 21
V_ASCL2_03_M02737 TRANSFAC + 44613195 44613211 6.0E-06 AGCAACAGCTGCAGCAT 17
V_CRX_02_M01436 TRANSFAC - 44615928 44615943 7.0E-06 TCTTGGGGATTATGTG 16
V_TEL1_01_M01993 TRANSFAC + 44613597 44613606 5.0E-06 CCCGGAAGTG 10
V_STAT3_03_M01595 TRANSFAC - 44613590 44613605 0.0E+00 ACTTCCGGGAAGTGAC 16
V_IRX3_01_M01318 TRANSFAC - 44615959 44615975 4.0E-06 TAGTTACATGTTGTGGA 17
V_ELF4_01_M01979 TRANSFAC + 44613597 44613606 4.0E-06 CCCGGAAGTG 10
V_IRX5_01_M01472 TRANSFAC - 44615959 44615975 5.0E-06 TAGTTACATGTTGTGGA 17
V_FAC1_01_M00456 TRANSFAC + 44615958 44615971 6.0E-06 GTCCACAACATGTA 14
V_AP1FJ_Q2_M00172 TRANSFAC - 44613585 44613595 9.0E-06 AGTGACTTCGT 11
V_NFY_01_M00287 TRANSFAC + 44613564 44613579 3.0E-06 AACAACCAATCGGCTT 16
V_STAT_01_M00223 TRANSFAC + 44613595 44613603 7.0E-06 TTCCCGGAA 9
V_SREBP_Q3_M00776 TRANSFAC + 44613878 44613889 5.0E-06 CACATCACCCTA 12
V_IRX2_01_M01405 TRANSFAC - 44615959 44615975 4.0E-06 TAGTTACATGTTGTGGA 17
V_IRF1_01_M00062 TRANSFAC + 44616019 44616031 3.0E-06 GAATACTGAAAAC 13
V_ELF_02_M02053 TRANSFAC + 44613597 44613606 1.0E-05 CCCGGAAGTG 10
V_STAT1_Q6_M01823 TRANSFAC - 44613594 44613603 8.0E-06 TTCCGGGAAG 10
V_STAT1_05_M01260 TRANSFAC - 44613585 44613606 0.0E+00 CACTTCCGGGAAGTGACTTCGT 22
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL