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TMCO1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54499 transmembrane and coiled-coil domains 1 chr1 - 165737659 - 165743159 165738159 Transcription Factor Binding Sites   Download all TFBS in the TMCO1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MESP1_bHLH_DBD_dimeric_10_1 SELEX - 165742895 165742904 5.0E-06 TACACCTGTG 10 Sox1_HMG_DBD_dimeric_14_1 SELEX + 165735473 165735486 4.0E-06 GGAACAAGTATTCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 165735473 165735486 5.0E-06 TGAATACTTGTTCC 14 GABPA_MA0062.2 JASPAR - 165738126 165738136 7.0E-06 CCGGAAGCGGA 11 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX - 165738399 165738410 1.0E-05 TACGACCACAGA 12 Pax6_MA0069.1 JASPAR - 165738048 165738061 6.0E-06 TTTTCGCTTCACTT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 165742845 165742858 4.0E-06 TGATTAACTAATGC 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 165742845 165742858 9.0E-06 GCATTAGTTAATCA 14 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 165738376 165738384 7.0E-06 AGAAGTCAA 9 Pax4_MA0068.1 JASPAR - 165742585 165742614 2.0E-06 AAATAAGTTCAAAAATAATAATTAAAATAT 30 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 165742679 165742687 3.0E-06 GGATAATCC 9 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 165742679 165742687 6.0E-06 GGATTATCC 9 SPIB_ETS_DBD_monomeric_14_1 SELEX - 165738122 165738135 9.0E-06 CGGAAGCGGAAGTG 14 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 165738684 165738695 3.0E-06 TCCCCTAAGGCA 12 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 165742721 165742734 4.0E-06 GGGTGACACAGCGA 14 NFATC1_NFAT_full_dimeric_20_1 SELEX - 165742603 165742622 3.0E-06 TTTGGAAAAAATAAGTTCAA 20 Lhx3_MA0135.1 JASPAR + 165742845 165742857 4.0E-06 TGATTAACTAATG 13 Gata1_MA0035.2 JASPAR + 165737944 165737954 3.0E-06 AGAGATAAAAA 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 165742882 165742896 6.0E-06 TGCACACACATACAC 15 Foxd3_MA0041.1 JASPAR + 165738409 165738420 7.0E-06 TAATATTAGTTT 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 165738684 165738695 2.0E-06 TCCCCTAAGGCA 12 NR3C1_MA0113.1 JASPAR - 165742602 165742619 4.0E-06 GGAAAAAATAAGTTCAAA 18 ETV6_ETS_full_monomeric_10_1 SELEX - 165738122 165738131 1.0E-06 AGCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX - 165738122 165738136 0.0E+00 CCGGAAGCGGAAGTG 15 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 165738684 165738695 2.0E-06 TCCCCTAAGGCA 12 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 165742845 165742858 5.0E-06 TGATTAACTAATGC 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 165742845 165742858 5.0E-06 GCATTAGTTAATCA 14 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 165742847 165742856 1.0E-05 ATTAGTTAAT 10 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 165742678 165742688 4.0E-06 TGGATAATCCT 11 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 165738684 165738695 6.0E-06 TCCCCTAAGGCA 12 IRF2_MA0051.1 JASPAR + 165738045 165738062 2.0E-06 GAAAAGTGAAGCGAAAAC 18 V_FOXP1_01_M00987 TRANSFAC + 165742597 165742616 3.0E-06 TTATTTTTGAACTTATTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 165742876 165742895 4.0E-06 TAATTTGTGTATGTGTGTGC 20 V_CDP_03_M01342 TRANSFAC + 165742839 165742855 9.0E-06 AGTAGCTGATTAACTAA 17 V_HNF3B_01_M00131 TRANSFAC + 165738407 165738421 2.0E-06 CGTAATATTAGTTTA 15 V_ZSCAN4_03_M02838 TRANSFAC - 165742886 165742902 1.0E-06 CACCTGTGCACACACAT 17 V_GATA1_Q6_M02004 TRANSFAC + 165735370 165735384 5.0E-06 GTAAAAGATAACTAC 15 V_AREB6_03_M00414 TRANSFAC - 165742894 165742905 0.0E+00 CTACACCTGTGC 12 V_GATA2_02_M00348 TRANSFAC + 165737944 165737953 5.0E-06 AGAGATAAAA 10 V_RORA1_01_M00156 TRANSFAC - 165742769 165742781 8.0E-06 AGTTCGAGGTCAT 13 V_EVI1_04_M00081 TRANSFAC - 165742605 165742619 7.0E-06 GGAAAAAATAAGTTC 15 V_FOXD3_01_M00130 TRANSFAC + 165738409 165738420 4.0E-06 TAATATTAGTTT 12 V_DEAF1_02_M01002 TRANSFAC - 165737894 165737918 5.0E-06 GTGAGAGCGGGTATTTCTCAGACGT 25 V_GM397_03_M02760 TRANSFAC - 165742886 165742902 3.0E-06 CACCTGTGCACACACAT 17 V_CBF_02_M01080 TRANSFAC + 165733671 165733686 1.0E-05 AGGTATGTGGATAAAT 16 V_MAFB_03_M02879 TRANSFAC - 165742610 165742624 7.0E-06 CATTTGGAAAAAATA 15 V_GABP_B_M00341 TRANSFAC - 165738120 165738131 3.0E-06 AGCGGAAGTGCG 12 V_GABP_B_M00341 TRANSFAC - 165738126 165738137 8.0E-06 CCCGGAAGCGGA 12 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 165735285 165735297 4.0E-06 CTGAACCTTTACT 13 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 165738293 165738305 9.0E-06 GCGAACTTTGCCC 13 V_FOXO3A_Q1_M01137 TRANSFAC + 165733766 165733777 8.0E-06 ACTAAACAAAAT 12 V_FOXO3A_Q1_M01137 TRANSFAC - 165742606 165742617 6.0E-06 AAAAAATAAGTT 12 V_CART1_02_M01362 TRANSFAC - 165742843 165742859 8.0E-06 CGCATTAGTTAATCAGC 17 V_CUX1_03_M02958 TRANSFAC + 165742839 165742855 9.0E-06 AGTAGCTGATTAACTAA 17 V_FOXJ1_03_M02750 TRANSFAC + 165733764 165733779 8.0E-06 TTACTAAACAAAATGA 16 V_GKLF_02_M01588 TRANSFAC + 165742864 165742875 7.0E-06 ACCACGCCCAGC 12 V_AFP1_Q6_M00616 TRANSFAC - 165738356 165738366 8.0E-06 AATAACTGGAT 11 V_PU1_Q4_M01172 TRANSFAC + 165739180 165739198 1.0E-06 CTCTTGTACTTCCTCCTAT 19 V_PU1_Q4_M01172 TRANSFAC + 165742151 165742169 7.0E-06 TCCATGGATTTCCCCCTTT 19 V_K2B_01_M01348 TRANSFAC - 165742839 165742855 7.0E-06 TTAGTTAATCAGCTACT 17 V_K2B_01_M01348 TRANSFAC + 165742840 165742856 3.0E-06 GTAGCTGATTAACTAAT 17 V_ALX4_02_M01417 TRANSFAC - 165742843 165742859 7.0E-06 CGCATTAGTTAATCAGC 17 V_NR3C1_01_M02219 TRANSFAC - 165742602 165742619 4.0E-06 GGAAAAAATAAGTTCAAA 18 V_TCFAP2E_04_M02926 TRANSFAC - 165742610 165742623 4.0E-06 ATTTGGAAAAAATA 14 V_SPIC_01_M02042 TRANSFAC - 165738122 165738131 9.0E-06 AGCGGAAGTG 10 V_HELIOSA_02_M01004 TRANSFAC - 165742613 165742623 2.0E-06 ATTTGGAAAAA 11 V_POU3F2_01_M00463 TRANSFAC - 165742847 165742860 5.0E-06 ACGCATTAGTTAAT 14 V_ZFP105_03_M02827 TRANSFAC + 165733766 165733780 4.0E-06 ACTAAACAAAATGAG 15 V_ARID5A_03_M02736 TRANSFAC - 165738404 165738417 4.0E-06 CTAATATTACGACC 14 V_ARID5A_03_M02736 TRANSFAC + 165738408 165738421 8.0E-06 GTAATATTAGTTTA 14 V_HNF4_01_B_M00411 TRANSFAC - 165738293 165738307 4.0E-06 CCGGGCAAAGTTCGC 15 V_HIC1_06_M02867 TRANSFAC + 165742644 165742659 6.0E-06 ATGTGTGCCCTAAATA 16 V_XFD3_01_M00269 TRANSFAC + 165733764 165733777 7.0E-06 TTACTAAACAAAAT 14 V_IRF2_01_M00063 TRANSFAC + 165738045 165738057 3.0E-06 GAAAAGTGAAGCG 13 V_IRX4_01_M01410 TRANSFAC - 165742653 165742669 7.0E-06 ATGAAACATGTATTTAG 17 V_IRX4_01_M01410 TRANSFAC + 165742654 165742670 7.0E-06 TAAATACATGTTTCATC 17 V_GADP_01_M01258 TRANSFAC + 165738122 165738133 5.0E-06 CACTTCCGCTTC 12 V_HOX13_01_M00023 TRANSFAC + 165742583 165742612 1.0E-05 ATATATTTTAATTATTATTTTTGAACTTAT 30 V_PAX6_Q2_M00979 TRANSFAC - 165742808 165742821 9.0E-06 CTGAGGTGGAAGGA 14 V_OCT1_04_M00138 TRANSFAC - 165742594 165742616 9.0E-06 AAAAATAAGTTCAAAAATAATAA 23 V_UNCX4.1_01_M01458 TRANSFAC + 165742843 165742859 7.0E-06 GCTGATTAACTAATGCG 17 V_ERALPHA_01_M01801 TRANSFAC + 165742761 165742775 3.0E-06 AACTCACTATGACCT 15 V_ERALPHA_01_M01801 TRANSFAC - 165742761 165742775 2.0E-06 AGGTCATAGTGAGTT 15 V_GATA1_09_M02254 TRANSFAC + 165737944 165737954 3.0E-06 AGAGATAAAAA 11 V_IRX3_01_M01318 TRANSFAC - 165742653 165742669 3.0E-06 ATGAAACATGTATTTAG 17 V_IRX3_01_M01318 TRANSFAC + 165742654 165742670 6.0E-06 TAAATACATGTTTCATC 17 V_IRX5_01_M01472 TRANSFAC - 165742653 165742669 4.0E-06 ATGAAACATGTATTTAG 17 V_IRX5_01_M01472 TRANSFAC + 165742654 165742670 1.0E-06 TAAATACATGTTTCATC 17 V_ELK1_01_M00007 TRANSFAC - 165738119 165738134 2.0E-06 GGAAGCGGAAGTGCGA 16 V_IRX3_02_M01485 TRANSFAC - 165742653 165742669 4.0E-06 ATGAAACATGTATTTAG 17 V_IRX3_02_M01485 TRANSFAC + 165742654 165742670 7.0E-06 TAAATACATGTTTCATC 17 V_CIZ_01_M00734 TRANSFAC - 165742610 165742618 3.0E-06 GAAAAAATA 9 V_GABPBETA_Q3_M01876 TRANSFAC - 165738121 165738131 2.0E-06 AGCGGAAGTGC 11 V_FOXL1_02_M02857 TRANSFAC + 165733763 165733778 5.0E-06 TTTACTAAACAAAATG 16 V_LUN1_01_M00480 TRANSFAC + 165742869 165742885 8.0E-06 GCCCAGCTAATTTGTGT 17 V_GATA3_02_M00350 TRANSFAC + 165737944 165737953 2.0E-06 AGAGATAAAA 10 V_E2F3_03_M02743 TRANSFAC - 165738331 165738345 2.0E-06 AAAAAGGCGCGCGCC 15 V_ERR1_Q2_M00511 TRANSFAC - 165742768 165742781 1.0E-06 AGTTCGAGGTCATA 14 V_PARP_Q3_M01211 TRANSFAC + 165737899 165737908 8.0E-06 TGAGAAATAC 10 V_GATA6_01_M00462 TRANSFAC + 165735373 165735382 9.0E-06 AAAGATAACT 10 V_E2F2_03_M02742 TRANSFAC - 165738331 165738345 1.0E-06 AAAAAGGCGCGCGCC 15 V_NRSF_01_M00256 TRANSFAC - 165738313 165738333 4.0E-06 GCCAGCACCCCAGTCAGTAAA 21 V_E2_Q6_01_M00928 TRANSFAC + 165735286 165735301 4.0E-06 TGAACCTTTACTGGTT 16 V_FOXO3_01_M00477 TRANSFAC - 165733764 165733777 5.0E-06 ATTTTGTTTAGTAA 14 V_ALX4_03_M02944 TRANSFAC - 165742843 165742859 7.0E-06 CGCATTAGTTAATCAGC 17 V_NFAT2_02_M01749 TRANSFAC - 165742149 165742159 9.0E-06 ATCCATGGAAC 11 V_PLZF_02_M01075 TRANSFAC - 165738405 165738433 8.0E-06 GCAAACCCAAGCTAAACTAATATTACGAC 29 V_IRX2_01_M01405 TRANSFAC - 165742653 165742669 4.0E-06 ATGAAACATGTATTTAG 17 V_IRX2_01_M01405 TRANSFAC + 165742654 165742670 1.0E-06 TAAATACATGTTTCATC 17 V_TBX22_01_M01195 TRANSFAC - 165737979 165737997 9.0E-06 AGGTGCGAGATGAGCACTA 19 V_GATA2_03_M00349 TRANSFAC + 165737944 165737953 3.0E-06 AGAGATAAAA 10 V_SRF_06_M02916 TRANSFAC - 165742606 165742622 4.0E-06 TTTGGAAAAAATAAGTT 17 V_HOMEZ_01_M01429 TRANSFAC - 165737947 165737963 2.0E-06 TCCTCATCGTTTTTATC 17 V_FOXO1_01_M00473 TRANSFAC + 165733766 165733775 9.0E-06 ACTAAACAAA 10 V_LHX9_01_M01367 TRANSFAC - 165742843 165742859 2.0E-06 CGCATTAGTTAATCAGC 17 V_AP2ALPHA_02_M01045 TRANSFAC + 165738682 165738696 5.0E-06 AGTGCCTTAGGGGAG 15 V_TAACC_B_M00331 TRANSFAC - 165742907 165742929 1.0E-05 AGCAACATAGCAAGACCCCTAGC 23 V_ELK1_03_M01163 TRANSFAC - 165738122 165738132 1.0E-05 AAGCGGAAGTG 11 V_IRXB3_01_M01377 TRANSFAC + 165742654 165742670 4.0E-06 TAAATACATGTTTCATC 17 V_PAX4_04_M00380 TRANSFAC - 165742587 165742616 6.0E-06 AAAAATAAGTTCAAAAATAATAATTAAAAT 30 V_GATA1_06_M00347 TRANSFAC + 165737944 165737953 8.0E-06 AGAGATAAAA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.