Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARMCX6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54470 armadillo repeat containing, X-linked 6 chrX - 100872491 - 100877991 100872991 Transcription Factor Binding Sites   Download all TFBS in the ARMCX6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 100874470 100874487 2.0E-06 ACTCTAAATATAGACACT 18 POU2F1_POU_DBD_dimeric_14_1 SELEX - 100874608 100874621 7.0E-06 TCTGAATATTCACC 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 100874472 100874483 1.0E-06 TCTAAATATAGA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 100874472 100874483 7.0E-06 TCTATATTTAGA 12 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 100874619 100874627 7.0E-06 AGAAGTCAA 9 YY1_C2H2_full_monomeric_11_1 SELEX + 100872317 100872327 1.0E-05 TCCGCCATTTC 11 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 2.0E-06 GTCACGTGAC 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 2.0E-06 GTCACGTGAC 10 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 100874472 100874483 1.0E-06 TCTAAATATAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 100874472 100874483 6.0E-06 TCTATATTTAGA 12 Pax4_MA0068.1 JASPAR - 100872731 100872760 8.0E-06 AAATACTGCTACCCACCCCCACCCCACCCC 30 MEF2B_MADS_full_dimeric_12_1 SELEX + 100874472 100874483 2.0E-06 TCTAAATATAGA 12 USF1_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 3.0E-06 GTCACGTGAC 10 USF1_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 3.0E-06 GTCACGTGAC 10 MEF2A_MA0052.1 JASPAR - 100874473 100874482 2.0E-06 CTATATTTAG 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 100872984 100872993 1.0E-06 GTCACGTGAC 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 100872984 100872993 1.0E-06 GTCACGTGAC 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 100874621 100874634 0.0E+00 AAGTCAATATGTCA 14 XBP1_bZIP_DBD_dimeric_14_1 SELEX + 100872992 100873005 2.0E-06 ACGGCCACGTCACC 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 100874608 100874621 3.0E-06 GGTGAATATTCAGA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 100874608 100874621 4.0E-06 TCTGAATATTCACC 14 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 3.0E-06 GTCACGTGAC 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 3.0E-06 GTCACGTGAC 10 SP1_MA0079.2 JASPAR + 100872437 100872446 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 100877833 100877842 3.0E-06 CCCCTCCCCC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 100872984 100872993 3.0E-06 GTCACGTGAC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 100872984 100872993 3.0E-06 GTCACGTGAC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 100872994 100873006 1.0E-06 GGCCACGTCACCA 13 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 3.0E-06 GTCACGTGAC 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 3.0E-06 GTCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX + 100872984 100872993 3.0E-06 GTCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 100872984 100872993 3.0E-06 GTCACGTGAC 10 YY2_C2H2_full_monomeric_11_1 SELEX + 100872317 100872327 4.0E-06 TCCGCCATTTC 11 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 100874472 100874485 9.0E-06 TCTAAATATAGACA 14 CREB3L1_bZIP_full_dimeric_14_1 SELEX + 100872993 100873006 1.0E-06 CGGCCACGTCACCA 14 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 100872892 100872907 0.0E+00 GAAGAAAGAAGGAAAC 16 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 4.0E-06 GTCACGTGAC 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 4.0E-06 GTCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 100872984 100872993 8.0E-06 GTCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 8.0E-06 GTCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX + 100872984 100872993 5.0E-06 GTCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX - 100872984 100872993 5.0E-06 GTCACGTGAC 10 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 100872375 100872386 8.0E-06 TTTCTCCACACC 12 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 100872468 100872478 1.0E-05 GGGCTAATCCC 11 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 100872984 100872993 1.0E-06 GTCACGTGAC 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 100872984 100872993 2.0E-06 GTCACGTGAC 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX - 100872984 100872993 2.0E-06 GTCACGTGAC 10 RREB1_MA0073.1 JASPAR - 100872731 100872750 7.0E-06 ACCCACCCCCACCCCACCCC 20 V_USF_Q6_M00187 TRANSFAC + 100872984 100872993 4.0E-06 GTCACGTGAC 10 V_USF_Q6_M00187 TRANSFAC - 100872984 100872993 4.0E-06 GTCACGTGAC 10 V_CDX2_Q5_01_M01659 TRANSFAC + 100877896 100877906 8.0E-06 TTCATAAAAGT 11 V_MYOD_Q6_M00184 TRANSFAC + 100874444 100874453 7.0E-06 TCCACCTGTC 10 V_POU3F3_01_M03090 TRANSFAC + 100874416 100874432 9.0E-06 CAAGTATGCAGAAGTTA 17 V_ATF5_01_M01295 TRANSFAC - 100877879 100877889 4.0E-06 CCTCTTCCTTC 11 V_ALX4_01_M00619 TRANSFAC + 100874388 100874400 0.0E+00 CCTCAGAATAATC 13 V_SIX6_02_M01398 TRANSFAC - 100874511 100874527 7.0E-06 TCTGGGGTGTCATATTT 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 100874606 100874617 0.0E+00 AATATTCACCAG 12 V_COE1_Q6_M01871 TRANSFAC + 100877922 100877935 9.0E-06 CCCCAGGGGAAGAT 14 V_MEF2_02_M00231 TRANSFAC + 100874466 100874487 1.0E-06 TCATACTCTAAATATAGACACT 22 V_OCTAMER_01_M01324 TRANSFAC + 100874416 100874432 9.0E-06 CAAGTATGCAGAAGTTA 17 V_IRF3_05_M02767 TRANSFAC - 100872890 100872903 6.0E-06 AAAGAAGGAAACTA 14 V_SP1_03_M02281 TRANSFAC + 100872437 100872446 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 100877833 100877842 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC + 100874394 100874403 6.0E-06 AATAATCCCA 10 V_SP1_02_M01303 TRANSFAC + 100872731 100872741 5.0E-06 GGGGTGGGGTG 11 V_E2A_Q2_M00804 TRANSFAC + 100874445 100874458 2.0E-06 CCACCTGTCCCTGC 14 V_HEN1_01_M00068 TRANSFAC + 100872776 100872797 4.0E-06 AAGGGACCCAGCTGTGATCGGC 22 V_HEN1_01_M00068 TRANSFAC - 100872776 100872797 4.0E-06 GCCGATCACAGCTGGGTCCCTT 22 V_HELIOSA_01_M01003 TRANSFAC - 100874396 100874406 9.0E-06 TTTTGGGATTA 11 V_OCT2_02_M01761 TRANSFAC + 100874610 100874619 0.0E+00 TGAATATTCA 10 V_OCT2_02_M01761 TRANSFAC - 100874610 100874619 0.0E+00 TGAATATTCA 10 V_MEF2A_Q6_M02024 TRANSFAC - 100874472 100874481 1.0E-05 TATATTTAGA 10 V_HNF6_Q6_M00639 TRANSFAC + 100874619 100874630 2.0E-06 AGAAGTCAATAT 12 V_ZNF219_01_M01122 TRANSFAC - 100872736 100872747 8.0E-06 CACCCCCACCCC 12 V_OCT1_02_M00136 TRANSFAC - 100874606 100874620 4.0E-06 CTGAATATTCACCAG 15 V_OCT1_02_M00136 TRANSFAC + 100874609 100874623 2.0E-06 GTGAATATTCAGAAG 15 V_TCFAP2C_03_M02821 TRANSFAC + 100877918 100877932 1.0E-06 ATAGCCCCAGGGGAA 15 V_TCFAP2C_03_M02821 TRANSFAC - 100877918 100877932 7.0E-06 TTCCCCTGGGGCTAT 15 V_SREBP1_01_M00220 TRANSFAC + 100872983 100872993 5.0E-06 GGTCACGTGAC 11 V_SREBP1_01_M00220 TRANSFAC - 100872984 100872994 5.0E-06 CGTCACGTGAC 11 V_NFAT_Q6_M00302 TRANSFAC - 100873104 100873115 1.0E-06 CAGAGGAAAAAA 12 V_NKX26_01_M01322 TRANSFAC - 100877903 100877918 5.0E-06 TGGGCCACTTGTACTT 16 V_KROX_Q6_M00982 TRANSFAC - 100872736 100872749 3.0E-06 CCCACCCCCACCCC 14 V_RSRFC4_Q2_M00407 TRANSFAC + 100874470 100874486 0.0E+00 ACTCTAAATATAGACAC 17 V_MAZ_Q6_01_M02023 TRANSFAC - 100872436 100872449 3.0E-06 GGCGGAGGAGGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 100877833 100877846 1.0E-06 GGGGGAGGGGAGGT 14 V_MEF2_03_M00232 TRANSFAC + 100874466 100874487 1.0E-06 TCATACTCTAAATATAGACACT 22 V_SP1SP3_Q4_M01219 TRANSFAC + 100872436 100872446 1.0E-05 CCCCCTCCTCC 11 V_MEF2_04_M00233 TRANSFAC + 100874466 100874487 9.0E-06 TCATACTCTAAATATAGACACT 22 V_CRX_02_M01436 TRANSFAC - 100874392 100874407 8.0E-06 GTTTTGGGATTATTCT 16 V_RREB1_01_M00257 TRANSFAC - 100872731 100872744 1.0E-06 CCCCACCCCACCCC 14 V_RREB1_01_M00257 TRANSFAC - 100872737 100872750 7.0E-06 ACCCACCCCCACCC 14 V_MEF2_Q6_01_M00941 TRANSFAC - 100874473 100874484 3.0E-06 GTCTATATTTAG 12 V_CTCF_02_M01259 TRANSFAC + 100872388 100872407 4.0E-06 AAGGGGCCAGGAGAGGGCGA 20 V_SIX2_01_M01433 TRANSFAC - 100874511 100874527 8.0E-06 TCTGGGGTGTCATATTT 17 V_ISGF4G_04_M02875 TRANSFAC + 100877963 100877976 6.0E-06 GGGAAACACAACTA 14 V_GATA4_Q3_M00632 TRANSFAC - 100872894 100872905 7.0E-06 AGAAAGAAGGAA 12 V_TFIII_Q6_M00706 TRANSFAC + 100874525 100874533 6.0E-06 AGAGGGAGG 9 V_NKX25_03_M01414 TRANSFAC - 100877903 100877918 5.0E-06 TGGGCCACTTGTACTT 16 V_STRA13_01_M00985 TRANSFAC - 100872982 100872995 0.0E+00 CCGTCACGTGACCA 14 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 100872858 100872866 8.0E-06 GAGGGTGGG 9 V_TFEB_01_M01768 TRANSFAC + 100872984 100872993 3.0E-06 GTCACGTGAC 10 V_TFEB_01_M01768 TRANSFAC - 100872984 100872993 3.0E-06 GTCACGTGAC 10 V_LUN1_01_M00480 TRANSFAC + 100877864 100877880 4.0E-06 TCCCAGGAGCCTAGGGA 17 V_ZBTB12_04_M02928 TRANSFAC + 100874495 100874509 9.0E-06 ACCTCTTAGAACATT 15 V_MEIS1_01_M00419 TRANSFAC - 100873094 100873105 7.0E-06 AAGTGACAGGGC 12 V_TFIIA_Q6_M00707 TRANSFAC - 100872417 100872428 8.0E-06 TATGAGAGGGCC 12 V_TCFAP2B_03_M02820 TRANSFAC + 100877919 100877932 4.0E-06 TAGCCCCAGGGGAA 14 V_PITX2_Q2_M00482 TRANSFAC + 100874394 100874404 1.0E-06 AATAATCCCAA 11 V_RSRFC4_01_M00026 TRANSFAC + 100874470 100874485 6.0E-06 ACTCTAAATATAGACA 16 V_RSRFC4_01_M00026 TRANSFAC - 100874470 100874485 1.0E-06 TGTCTATATTTAGAGT 16 V_SIX4_01_M01374 TRANSFAC + 100874511 100874527 1.0E-06 AAATATGACACCCCAGA 17 V_ZFP281_01_M01597 TRANSFAC + 100877832 100877842 7.0E-06 CGGGGGAGGGG 11 V_BBX_03_M02739 TRANSFAC - 100874501 100874515 6.0E-06 TATTTCAATGTTCTA 15 V_TCFAP2A_03_M02819 TRANSFAC + 100877918 100877932 2.0E-06 ATAGCCCCAGGGGAA 15 V_ZFP281_04_M02831 TRANSFAC - 100872738 100872752 8.0E-06 CTACCCACCCCCACC 15 V_EKLF_Q5_M01874 TRANSFAC - 100872372 100872381 9.0E-06 CCACACCCAC 10 V_PAX4_02_M00377 TRANSFAC - 100877888 100877898 6.0E-06 GAAAAATTGCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 100872738 100872751 7.0E-06 GGTGGGGGTGGGTA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 100877830 100877843 9.0E-06 CTCGGGGGAGGGGA 14 V_TCFAP2E_03_M02822 TRANSFAC + 100877918 100877932 7.0E-06 ATAGCCCCAGGGGAA 15 V_TCFAP2E_03_M02822 TRANSFAC - 100877918 100877932 1.0E-05 TTCCCCTGGGGCTAT 15 V_SP1_Q4_01_M00932 TRANSFAC + 100874525 100874537 9.0E-06 AGAGGGAGGGGCT 13 V_PAX4_04_M00380 TRANSFAC - 100872731 100872760 1.0E-06 AAATACTGCTACCCACCCCCACCCCACCCC 30 V_DMRT5_01_M01150 TRANSFAC - 100873109 100873123 2.0E-06 TATTGTTACAGAGGA 15 V_NKX21_01_M01312 TRANSFAC - 100877903 100877918 2.0E-06 TGGGCCACTTGTACTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.