Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SASH3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54440 SAM and SH3 domain containing 3 chrX + 128908891 - 128914391 128913891 Transcription Factor Binding Sites   Download all TFBS in the SASH3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 128910692 128910700 1.0E-05 TTTAATCCC 9 GABPA_MA0062.2 JASPAR - 128915295 128915305 0.0E+00 CCGGAAGTGGC 11 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 128913871 128913882 5.0E-06 GGTCACGTGGCA 12 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 128913871 128913882 2.0E-06 TGCCACGTGACC 12 ZNF306_C2H2_full_monomeric_14_1 SELEX - 128915127 128915140 9.0E-06 GGGGATAGCCTGGG 14 FOXA1_MA0148.1 JASPAR - 128911407 128911417 2.0E-06 TGTTTGCTCAG 11 ELF4_ETS_full_monomeric_12_1 SELEX - 128915297 128915308 9.0E-06 CAGCCGGAAGTG 12 EWSR1-FLI1_MA0149.1 JASPAR - 128911238 128911255 4.0E-06 GGACAGAAGGGAGCAAGT 18 POU1F1_POU_DBD_monomeric_14_1 SELEX + 128910983 128910996 3.0E-06 AAAATGCAAATATG 14 GATA5_GATA_DBD_monomeric_8_1 SELEX - 128911822 128911829 7.0E-06 AGATAAGA 8 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 128915535 128915550 9.0E-06 AGGCCTCAAACCACAG 16 POU2F2_POU_DBD_monomeric_11_1 SELEX + 128910984 128910994 9.0E-06 AAATGCAAATA 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 128910985 128910993 7.0E-06 AATGCAAAT 9 GATA4_GATA_DBD_monomeric_8_1 SELEX - 128911822 128911829 7.0E-06 AGATAAGA 8 SRF_MA0083.1 JASPAR - 128913673 128913684 5.0E-06 GACATTATATGG 12 ZNF238_C2H2_full_monomeric_13_1 SELEX - 128910698 128910710 3.0E-06 TTGACAGATGTTT 13 PITX1_homeodomain_full_monomeric_8_1 SELEX - 128910692 128910699 1.0E-05 TTAATCCC 8 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 128913982 128913993 3.0E-06 TGCCCCCGGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 128913982 128913993 7.0E-06 TGCCCGGGGGCA 12 EOMES_TBX_DBD_monomeric_13_1 SELEX + 128915568 128915580 9.0E-06 AAAGTGTGAGAAA 13 T_MA0009.1 JASPAR - 128914028 128914038 1.0E-06 CTAGGTGTCAA 11 POU3F3_POU_DBD_monomeric_13_1 SELEX + 128910983 128910995 2.0E-06 AAAATGCAAATAT 13 ELF3_ETS_full_monomeric_13_1 SELEX - 128915296 128915308 4.0E-06 CAGCCGGAAGTGG 13 SP1_MA0079.2 JASPAR - 128915357 128915366 3.0E-06 CCCCTCCCCC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 128913870 128913882 9.0E-06 TGCCACGTGACCT 13 GATA3_GATA_full_monomeric_8_1 SELEX - 128911822 128911829 7.0E-06 AGATAAGA 8 POU3F1_POU_DBD_monomeric_12_1 SELEX + 128910984 128910995 4.0E-06 AAATGCAAATAT 12 RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 128910692 128910699 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX - 128910692 128910700 4.0E-06 TTTAATCCC 9 EHF_ETS_full_monomeric_12_1 SELEX - 128915297 128915308 7.0E-06 CAGCCGGAAGTG 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 128911517 128911528 6.0E-06 TGCCCCAGGCCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 128913982 128913993 3.0E-06 TGCCCCCGGGCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 128913982 128913993 8.0E-06 TGCCCGGGGGCA 12 CREB3L1_bZIP_full_dimeric_14_1 SELEX - 128913870 128913883 8.0E-06 CTGCCACGTGACCT 14 Pou5f1_MA0142.1 JASPAR + 128910979 128910993 6.0E-06 CTGTAAAATGCAAAT 15 Myf_MA0055.1 JASPAR - 128913897 128913908 8.0E-06 CGGCAGCAGCAG 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 128910983 128910994 4.0E-06 AAAATGCAAATA 12 GABPA_ETS_full_monomeric_10_1 SELEX - 128915297 128915306 9.0E-06 GCCGGAAGTG 10 ELF3_ETS_DBD_monomeric_12_1 SELEX - 128915297 128915308 7.0E-06 CAGCCGGAAGTG 12 RUNX1_MA0002.2 JASPAR - 128915542 128915552 3.0E-06 CCCTGTGGTTT 11 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 128913982 128913993 1.0E-06 TGCCCCCGGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 128913982 128913993 1.0E-05 TGCCCGGGGGCA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 128910984 128910995 9.0E-06 AAATGCAAATAT 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 128913982 128913993 1.0E-06 TGCCCCCGGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 128913982 128913993 8.0E-06 TGCCCGGGGGCA 12 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 128915585 128915598 2.0E-06 TGACACTTTGACAC 14 V_FOXP3_Q4_M00992 TRANSFAC - 128913787 128913803 3.0E-06 GAGATTCTGATGCAGAC 17 V_USF_Q6_M00187 TRANSFAC + 128913872 128913881 2.0E-06 GTCACGTGGC 10 V_POU3F3_01_M03090 TRANSFAC - 128910980 128910996 9.0E-06 CATATTTGCATTTTACA 17 V_OBOX5_05_M03066 TRANSFAC + 128910688 128910704 3.0E-06 TGGTGGGATTAAACATC 17 V_GATA2_02_M00348 TRANSFAC - 128911822 128911831 7.0E-06 GAAGATAAGA 10 V_MAX_Q6_M01830 TRANSFAC - 128913873 128913884 6.0E-06 CCTGCCACGTGA 12 V_OBOX1_01_M01450 TRANSFAC + 128910687 128910703 5.0E-06 GTGGTGGGATTAAACAT 17 V_NKX29_01_M01352 TRANSFAC + 128910705 128910721 3.0E-06 TGTCAAGTGCTTAATGT 17 V_GATA3_03_M00351 TRANSFAC + 128911817 128911826 0.0E+00 AAAGATCTTA 10 V_POU5F1_02_M02245 TRANSFAC + 128910979 128910993 6.0E-06 CTGTAAAATGCAAAT 15 V_EBOX_Q6_01_M01034 TRANSFAC - 128913871 128913880 2.0E-06 CCACGTGACC 10 V_OCT1_Q5_01_M00930 TRANSFAC - 128910985 128910995 3.0E-06 ATATTTGCATT 11 V_OCTAMER_01_M01324 TRANSFAC - 128910980 128910996 9.0E-06 CATATTTGCATTTTACA 17 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 128910696 128910709 5.0E-06 TGACAGATGTTTAA 14 V_RP58_01_M00532 TRANSFAC + 128910697 128910708 1.0E-06 TAAACATCTGTC 12 V_OCT1_01_M00135 TRANSFAC + 128910980 128910998 1.0E-06 TGTAAAATGCAAATATGTT 19 V_POU2F3_01_M01476 TRANSFAC + 128910982 128910997 4.0E-06 TAAAATGCAAATATGT 16 V_P53_DECAMER_Q2_M00761 TRANSFAC + 128911109 128911118 7.0E-06 AGGCAAGTCC 10 V_SP1_03_M02281 TRANSFAC - 128915357 128915366 3.0E-06 CCCCTCCCCC 10 V_OCT_C_M00210 TRANSFAC - 128910984 128910996 5.0E-06 CATATTTGCATTT 13 V_PITX2_Q6_M02114 TRANSFAC - 128910691 128910700 3.0E-06 TTTAATCCCA 10 V_SP1_02_M01303 TRANSFAC - 128915313 128915323 5.0E-06 GGGGTGGGGAG 11 V_LDSPOLYA_B_M00317 TRANSFAC + 128911377 128911392 8.0E-06 TTAGTGTGTGATCTTC 16 V_CDP_04_M01344 TRANSFAC + 128913725 128913739 1.0E-05 TGATGATGATCGACA 15 V_TGIF2_01_M01407 TRANSFAC + 128910698 128910713 8.0E-06 AAACATCTGTCAAGTG 16 V_ZFP128_03_M02828 TRANSFAC - 128913663 128913679 0.0E+00 TATATGGCGTACCCAAG 17 V_ZNF219_01_M01122 TRANSFAC - 128915359 128915370 1.0E-06 CTCCCCCCTCCC 12 V_CRX_Q4_M00623 TRANSFAC - 128910690 128910702 4.0E-06 TGTTTAATCCCAC 13 V_OBOX5_02_M01480 TRANSFAC + 128910688 128910704 3.0E-06 TGGTGGGATTAAACATC 17 V_MYF_01_M01302 TRANSFAC - 128913897 128913908 8.0E-06 CGGCAGCAGCAG 12 V_SPI1_03_M02078 TRANSFAC - 128915473 128915482 1.0E-05 AGGGGAAGTG 10 V_RUNX1_01_M02257 TRANSFAC - 128915542 128915552 3.0E-06 CCCTGTGGTTT 11 V_GFI1_01_M00250 TRANSFAC + 128915932 128915955 9.0E-06 GCTGGCTGAATCACTGCTAGTCCC 24 V_ER81_02_M02065 TRANSFAC - 128915297 128915306 1.0E-05 GCCGGAAGTG 10 V_RXRA_04_M02895 TRANSFAC - 128910660 128910675 3.0E-06 GCGAGTAGTTTAATAT 16 V_EVI1_01_M00078 TRANSFAC - 128911819 128911834 1.0E-06 AGGGAAGATAAGATCT 16 V_MAZ_Q6_01_M02023 TRANSFAC + 128915357 128915370 7.0E-06 GGGGGAGGGGGGAG 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 128910984 128910994 8.0E-06 TATTTGCATTT 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 128911407 128911417 1.0E-05 TGTTTGCTCAG 11 V_OBOX2_01_M01364 TRANSFAC + 128910687 128910703 5.0E-06 GTGGTGGGATTAAACAT 17 V_NKX22_02_M01372 TRANSFAC - 128910702 128910718 2.0E-06 TTAAGCACTTGACAGAT 17 V_CUX1_04_M02959 TRANSFAC + 128913725 128913739 1.0E-05 TGATGATGATCGACA 15 V_GADP_01_M01258 TRANSFAC + 128915297 128915308 1.0E-06 CACTTCCGGCTG 12 V_USF_01_M00121 TRANSFAC + 128913870 128913883 6.0E-06 AGGTCACGTGGCAG 14 V_USF_01_M00121 TRANSFAC - 128913870 128913883 6.0E-06 CTGCCACGTGACCT 14 V_TAL1BETAE47_01_M00065 TRANSFAC - 128910696 128910711 2.0E-06 CTTGACAGATGTTTAA 16 V_ERR1_Q3_M01841 TRANSFAC + 128910972 128910986 7.0E-06 ACATAACCTGTAAAA 15 V_ZBRK1_01_M01105 TRANSFAC + 128915504 128915518 7.0E-06 GGGAAACAGAGATTG 15 V_OCAB_Q6_M02113 TRANSFAC + 128910984 128910994 2.0E-06 AAATGCAAATA 11 V_SP1_01_M00008 TRANSFAC - 128911137 128911146 7.0E-06 GAGGCGGGGT 10 V_OCT4_02_M01124 TRANSFAC - 128913786 128913800 8.0E-06 ATTCTGATGCAGACG 15 V_OCT1_B_M00342 TRANSFAC + 128910985 128910994 2.0E-06 AATGCAAATA 10 V_OCT_Q6_M00795 TRANSFAC - 128910985 128910995 3.0E-06 ATATTTGCATT 11 V_NKX23_01_M01457 TRANSFAC + 128910705 128910720 0.0E+00 TGTCAAGTGCTTAATG 16 V_NKX23_01_M01457 TRANSFAC - 128910705 128910720 1.0E-06 CATTAAGCACTTGACA 16 V_TAL1BETAITF2_01_M00070 TRANSFAC - 128910696 128910711 4.0E-06 CTTGACAGATGTTTAA 16 V_TFIII_Q6_M00706 TRANSFAC - 128911300 128911308 6.0E-06 AGAGGGAGG 9 V_TTF1_Q5_M02034 TRANSFAC - 128910703 128910716 0.0E+00 AAGCACTTGACAGA 14 V_POU5F1_01_M01307 TRANSFAC + 128910985 128910994 1.0E-06 AATGCAAATA 10 V_OBOX2_02_M03064 TRANSFAC + 128910687 128910703 5.0E-06 GTGGTGGGATTAAACAT 17 V_SMAD4_04_M02898 TRANSFAC - 128911162 128911178 4.0E-06 TCCTCCCCGCCACCTGG 17 V_SMAD4_04_M02898 TRANSFAC + 128915134 128915150 0.0E+00 TATCCCCCGCCAATTTT 17 V_OCT2_01_M01368 TRANSFAC + 128910982 128910997 2.0E-06 TAAAATGCAAATATGT 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 128910696 128910711 7.0E-06 CTTGACAGATGTTTAA 16 V_SIRT6_01_M01797 TRANSFAC - 128911822 128911829 7.0E-06 AGATAAGA 8 V_LUN1_01_M00480 TRANSFAC - 128911159 128911175 9.0E-06 TCCCCGCCACCTGGGGA 17 V_PITX1_01_M01484 TRANSFAC + 128910687 128910703 4.0E-06 GTGGTGGGATTAAACAT 17 V_NKX22_01_M00485 TRANSFAC + 128910707 128910716 6.0E-06 TCAAGTGCTT 10 V_DOBOX5_01_M01463 TRANSFAC + 128910688 128910704 5.0E-06 TGGTGGGATTAAACATC 17 V_OTX2_01_M01387 TRANSFAC + 128910688 128910704 4.0E-06 TGGTGGGATTAAACATC 17 V_TCF4_Q5_M00671 TRANSFAC + 128911359 128911366 1.0E-05 CCTTTGAA 8 V_ASCL2_04_M02841 TRANSFAC + 128915311 128915326 2.0E-06 TTCTCCCCACCCCAGC 16 V_P53_05_M01655 TRANSFAC - 128915761 128915780 8.0E-06 GGGTTTGCCTGGACTACTCT 20 V_PITX2_Q2_M00482 TRANSFAC - 128910690 128910700 1.0E-06 TTTAATCCCAC 11 V_NFAT2_02_M01749 TRANSFAC - 128915148 128915158 4.0E-06 TTCCAGGGAAA 11 V_ZFP281_01_M01597 TRANSFAC + 128915356 128915366 7.0E-06 CGGGGGAGGGG 11 V_CEBPB_Q6_M01896 TRANSFAC - 128911930 128911939 4.0E-06 TTGTGAAATA 10 V_OCT1_06_M00162 TRANSFAC - 128910983 128910996 5.0E-06 CATATTTGCATTTT 14 V_ZFP281_04_M02831 TRANSFAC - 128915361 128915375 9.0E-06 TGAACCTCCCCCCTC 15 V_ZFP281_04_M02831 TRANSFAC - 128915495 128915509 5.0E-06 TTTCCCACCCCCACC 15 V_E2F_01_M00024 TRANSFAC - 128915144 128915158 8.0E-06 TTCCAGGGAAAATTG 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 128911238 128911255 4.0E-06 GGACAGAAGGGAGCAAGT 18 V_VDR_Q3_M00444 TRANSFAC + 128915245 128915259 6.0E-06 GGGGCAGTGGGGTGT 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 128915542 128915549 1.0E-05 TGTGGTTT 8 V_PPARG_02_M00515 TRANSFAC - 128910892 128910914 1.0E-06 AACAAGGTCACCTTAAACTTGAT 23 V_PITX2_01_M01447 TRANSFAC + 128910688 128910704 4.0E-06 TGGTGGGATTAAACATC 17 V_UF1H3BETA_Q6_M01068 TRANSFAC + 128915354 128915367 1.0E-06 GGCGGGGGAGGGGG 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 128915495 128915508 7.0E-06 GGTGGGGGTGGGAA 14 V_OBOX5_01_M01381 TRANSFAC + 128910688 128910704 3.0E-06 TGGTGGGATTAAACATC 17 V_OBOX6_06_M03067 TRANSFAC - 128910688 128910704 3.0E-06 GATGTTTAATCCCACCA 17 V_OCT4_01_M01125 TRANSFAC + 128910979 128910993 4.0E-06 CTGTAAAATGCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.