Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

HAO1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
54363 hydroxyacid oxidase (glycolate oxidase) 1 chr20 -7920593 - 7926093 7921093

Transcription Factor Binding Sites

 
Download all TFBS in the HAO1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 7917073 7917090 1.0E-06 TAAGTAAATATTAATGCC 18
POU4F2_POU_full_monomeric_16_1 SELEX + 7917076 7917091 4.0E-06 ATTAATATTTACTTAG 16
CTCF_MA0139.1 JASPAR + 7917303 7917321 5.0E-06 TGTCCACTTGGTGGCGCAG 19
HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 7918961 7918969 4.0E-06 GCAATAAAA 9
Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 7918961 7918970 1.0E-06 GCAATAAAAA 10
Foxa2_MA0047.2 JASPAR + 7917081 7917092 1.0E-06 TATTTACTTAGA 12
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 7918961 7918978 9.0E-06 GCAATAAAAACTCAACTA 18
Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 7918961 7918970 0.0E+00 GCAATAAAAA 10
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 7917074 7917090 6.0E-06 GCATTAATATTTACTTA 17
FOXA1_MA0148.1 JASPAR + 7917081 7917091 5.0E-06 TATTTACTTAG 11
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 7917234 7917244 0.0E+00 TTTAAAGGTCA 11
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 7920470 7920486 3.0E-06 TTAGACAACAGTAATCA 17
MEF2D_MADS_DBD_dimeric_12_1 SELEX - 7918859 7918870 9.0E-06 ACTAAGAATAGA 12
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 7917079 7917090 0.0E+00 TAAGTAAATATT 12
IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 7917942 7917953 1.0E-05 TTACAAAACATG 12
FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 7917080 7917090 0.0E+00 TAAGTAAATAT 11
CEBPA_MA0102.2 JASPAR - 7918946 7918954 4.0E-06 TTTTGCAAT 9
HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 7917031 7917042 2.0E-06 AAAACGATCTTA 12
FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 7917075 7917088 0.0E+00 CATTAATATTTACT 14
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 7917075 7917088 2.0E-06 AGTAAATATTAATG 14
NR2F1_MA0017.1 JASPAR - 7917231 7917244 2.0E-06 TGACCTTTAAAAAT 14
BARHL2_homeodomain_full_dimeric_16_1 SELEX + 7917031 7917046 7.0E-06 AAAACGATCTTAATAG 16
BARHL2_homeodomain_full_dimeric_16_1 SELEX + 7917345 7917360 3.0E-06 TAATTTCCCTTAAACA 16
MEF2B_MADS_full_dimeric_12_1 SELEX - 7918859 7918870 4.0E-06 ACTAAGAATAGA 12
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 7917031 7917046 1.0E-05 AAAACGATCTTAATAG 16
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 7917345 7917360 3.0E-06 TAATTTCCCTTAAACA 16
HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 7918960 7918969 5.0E-06 TGCAATAAAA 10
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 7918961 7918970 2.0E-06 GCAATAAAAA 10
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 7920473 7920486 3.0E-06 GACAACAGTAATCA 14
Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 7924690 7924706 6.0E-06 AGGTCAAAACTAAGTCA 17
HOXC11_homeodomain_full_monomeric_11_2 SELEX + 7918960 7918970 1.0E-06 TGCAATAAAAA 11
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 7917229 7917244 8.0E-06 TGACCTTTAAAAATGT 16
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 7917075 7917088 1.0E-06 CATTAATATTTACT 14
FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 7917075 7917088 1.0E-06 AGTAAATATTAATG 14
CTCF_C2H2_full_monomeric_17_1 SELEX - 7917304 7917320 3.0E-06 TGCGCCACCAAGTGGAC 17
HOXA13_homeodomain_full_monomeric_10_1 SELEX + 7918961 7918970 2.0E-06 GCAATAAAAA 10
HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 7918976 7918990 6.0E-06 CTAGTTGATAATAAA 15
HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 7918976 7918990 7.0E-06 TTTATTATCAACTAG 15
Foxd3_MA0041.1 JASPAR + 7917078 7917089 8.0E-06 TAATATTTACTT 12
EN1_homeodomain_full_dimeric_14_1 SELEX - 7917008 7917021 9.0E-06 TAATAACACACTTA 14
FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 7917075 7917088 1.0E-06 CATTAATATTTACT 14
FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 7917075 7917088 1.0E-06 AGTAAATATTAATG 14
MLXIPL_bHLH_full_dimeric_10_1 SELEX - 7918871 7918880 9.0E-06 GTCACGTGAA 10
HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 7918961 7918970 2.0E-06 GCAATAAAAA 10
RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 7924690 7924709 1.0E-06 CACAGGTCAAAACTAAGTCA 20
CPEB1_RRM_full_monomeric_8_1 SELEX + 7918963 7918970 4.0E-06 AATAAAAA 8
MLX_bHLH_full_dimeric_10_1 SELEX + 7918871 7918880 9.0E-06 TTCACGTGAC 10
Sox3_HMG_DBD_dimeric_17_1 SELEX + 7917100 7917116 5.0E-06 AAACAATGAAAGCTTTA 17
RORA_1_MA0071.1 JASPAR + 7917235 7917244 7.0E-06 TTAAAGGTCA 10
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 7918961 7918978 7.0E-06 GCAATAAAAACTCAACTA 18
Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 7918960 7918970 4.0E-06 TGCAATAAAAA 11
CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 7918961 7918969 3.0E-06 GCAATAAAA 9
ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 7918871 7918880 8.0E-06 TTCACGTGAC 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 7918871 7918880 6.0E-06 GTCACGTGAA 10
FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 7917080 7917090 0.0E+00 TAAGTAAATAT 11
CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 7918961 7918969 3.0E-06 GCAATAAAA 9
HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 7918960 7918970 1.0E-06 TGCAATAAAAA 11
HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 7918961 7918970 4.0E-06 GCAATAAAAA 10
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 7920473 7920486 4.0E-06 GACAACAGTAATCA 14
IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 7917942 7917953 4.0E-06 TTACAAAACATG 12
V_MEQ_01_M02049 TRANSFAC - 7917187 7917195 7.0E-06 AACACACAC 9
V_DBX1_01_M01483 TRANSFAC - 7917074 7917090 6.0E-06 TAAGTAAATATTAATGC 17
V_DBX1_01_M01483 TRANSFAC + 7918977 7918993 8.0E-06 TAGTTGATAATAAAATA 17
V_DBX1_01_M01483 TRANSFAC - 7918977 7918993 3.0E-06 TATTTTATTATCAACTA 17
V_FREAC7_01_M00293 TRANSFAC - 7917077 7917092 8.0E-06 TCTAAGTAAATATTAA 16
V_GAF_Q6_M01209 TRANSFAC + 7917243 7917253 1.0E-06 CAAATTCCCAT 11
V_SOX40_04_M02908 TRANSFAC - 7917014 7917029 1.0E-05 TCTCATTCTAATAACA 16
V_FOXA2_04_M02749 TRANSFAC - 7917076 7917092 1.0E-06 TCTAAGTAAATATTAAT 17
V_CEBP_Q3_M00770 TRANSFAC - 7918946 7918957 5.0E-06 ACATTTTGCAAT 12
V_SOX30_03_M02804 TRANSFAC + 7917097 7917112 3.0E-06 GAGAAACAATGAAAGC 16
V_RORA1_01_M00156 TRANSFAC + 7917233 7917245 2.0E-06 TTTTAAAGGTCAA 13
V_EVI1_04_M00081 TRANSFAC - 7918857 7918871 3.0E-06 AACTAAGAATAGAAA 15
V_FOXD3_01_M00130 TRANSFAC + 7917078 7917089 5.0E-06 TAATATTTACTT 12
V_AR_Q6_01_M01996 TRANSFAC + 7917361 7917375 5.0E-06 GTATTTTCTGTTCTG 15
V_MAFB_03_M02879 TRANSFAC + 7918944 7918958 1.0E-05 ACATTGCAAAATGTA 15
V_MAFB_03_M02879 TRANSFAC + 7918956 7918970 4.0E-06 GTATTGCAATAAAAA 15
V_FOXJ2_02_M00423 TRANSFAC + 7917074 7917087 4.0E-06 GCATTAATATTTAC 14
V_MEF2_02_M00231 TRANSFAC - 7918855 7918876 2.0E-06 CGTGAAACTAAGAATAGAAATT 22
V_MEF2_02_M00231 TRANSFAC - 7924799 7924820 1.0E-06 GTCAGTAGTAAAAATAGATTTG 22
V_NR2F2_03_M02783 TRANSFAC + 7917233 7917248 0.0E+00 TTTTAAAGGTCAAATT 16
V_CEBP_Q2_M00190 TRANSFAC + 7918944 7918957 1.0E-06 ACATTGCAAAATGT 14
V_HNF3_Q6_01_M01012 TRANSFAC + 7917076 7917093 2.0E-06 ATTAATATTTACTTAGAG 18
V_PPAR_DR1_Q2_M00763 TRANSFAC + 7924701 7924713 9.0E-06 TGACCTGTGGCCA 13
V_COUPTF_Q6_M01036 TRANSFAC - 7917227 7917249 7.0E-06 GAATTTGACCTTTAAAAATGTCC 23
V_HOXD13_01_M01404 TRANSFAC + 7918958 7918973 3.0E-06 ATTGCAATAAAAACTC 16
V_CEBPB_01_M00109 TRANSFAC - 7918944 7918957 1.0E-06 ACATTTTGCAATGT 14
V_NKX62_Q2_M00489 TRANSFAC - 7917079 7917090 8.0E-06 TAAGTAAATATT 12
V_AR_03_M00956 TRANSFAC + 7917354 7917380 4.0E-06 TTAAACAGTATTTTCTGTTCTGAGGAT 27
V_REX1_01_M01695 TRANSFAC + 7917046 7917055 3.0E-06 GCAGCCATTG 10
V_SOX7_03_M02807 TRANSFAC + 7917094 7917115 5.0E-06 CTAGAGAAACAATGAAAGCTTT 22
V_PR_01_M00954 TRANSFAC + 7917354 7917380 1.0E-05 TTAAACAGTATTTTCTGTTCTGAGGAT 27
V_ZFP105_03_M02827 TRANSFAC + 7920479 7920493 4.0E-06 AGTAATCAAAATGAA 15
V_OCT1_03_M00137 TRANSFAC + 7918980 7918992 8.0E-06 TTGATAATAAAAT 13
V_HOXB13_01_M01467 TRANSFAC + 7918958 7918973 4.0E-06 ATTGCAATAAAAACTC 16
V_FOXO1_02_M00474 TRANSFAC - 7920477 7920490 8.0E-06 ATTTTGATTACTGT 14
V_COUP_01_M00158 TRANSFAC - 7917231 7917244 2.0E-06 TGACCTTTAAAAAT 14
V_XFD3_01_M00269 TRANSFAC - 7917077 7917090 1.0E-06 TAAGTAAATATTAA 14
V_RSRFC4_Q2_M00407 TRANSFAC - 7918856 7918872 4.0E-06 AAACTAAGAATAGAAAT 17
V_RSRFC4_Q2_M00407 TRANSFAC - 7924800 7924816 1.0E-06 GTAGTAAAAATAGATTT 17
V_HNF3A_01_M01261 TRANSFAC - 7917080 7917089 5.0E-06 AAGTAAATAT 10
V_HNF3_Q6_M00791 TRANSFAC - 7917079 7917091 2.0E-06 CTAAGTAAATATT 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 7917081 7917091 8.0E-06 TATTTACTTAG 11
V_HNF1_Q6_01_M01011 TRANSFAC + 7918975 7918995 3.0E-06 ACTAGTTGATAATAAAATAGC 21
V_MEF2_03_M00232 TRANSFAC - 7918855 7918876 9.0E-06 CGTGAAACTAAGAATAGAAATT 22
V_TATA_C_M00216 TRANSFAC - 7917232 7917241 6.0E-06 CCTTTAAAAA 10
V_MEF2_04_M00233 TRANSFAC - 7918855 7918876 2.0E-06 CGTGAAACTAAGAATAGAAATT 22
V_MEF2_04_M00233 TRANSFAC - 7924799 7924820 0.0E+00 GTCAGTAGTAAAAATAGATTTG 22
V_DAX1_01_M01248 TRANSFAC + 7917231 7917250 8.0E-06 ATTTTTAAAGGTCAAATTCC 20
V_XFD2_01_M00268 TRANSFAC - 7917077 7917090 5.0E-06 TAAGTAAATATTAA 14
V_NCX_02_M01420 TRANSFAC - 7918977 7918993 7.0E-06 TATTTTATTATCAACTA 17
V_STAT4_Q5_M02117 TRANSFAC - 7917348 7917357 1.0E-05 TTAAGGGAAA 10
V_CTCF_02_M01259 TRANSFAC + 7917300 7917319 3.0E-06 ACTTGTCCACTTGGTGGCGC 20
V_SOX11_03_M02795 TRANSFAC + 7917096 7917112 8.0E-06 AGAGAAACAATGAAAGC 17
V_NR1B1_Q6_M02110 TRANSFAC + 7917237 7917246 0.0E+00 AAAGGTCAAA 10
V_NR1B1_Q6_M02110 TRANSFAC - 7924699 7924708 9.0E-06 ACAGGTCAAA 10
V_ISGF4G_04_M02875 TRANSFAC + 7918965 7918978 8.0E-06 TAAAAACTCAACTA 14
V_GATA1_05_M00346 TRANSFAC + 7920492 7920501 5.0E-06 AATGATAACA 10
V_CEBPA_01_M00116 TRANSFAC + 7918944 7918957 3.0E-06 ACATTGCAAAATGT 14
V_STRA13_01_M00985 TRANSFAC + 7918869 7918882 2.0E-06 GTTTCACGTGACCA 14
V_FOXL1_04_M02753 TRANSFAC - 7917076 7917092 8.0E-06 TCTAAGTAAATATTAAT 17
V_ERR1_Q2_M00511 TRANSFAC + 7917233 7917246 0.0E+00 TTTTAAAGGTCAAA 14
V_AIRE_01_M00999 TRANSFAC + 7917919 7917944 3.0E-06 ACACTAACTGGACATAGTGGATTCAT 26
V_TCF7_04_M02921 TRANSFAC - 7918977 7918991 5.0E-06 TTTTATTATCAACTA 15
V_GATA6_01_M00462 TRANSFAC + 7920492 7920501 9.0E-06 AATGATAACA 10
V_SMAD3_03_M02794 TRANSFAC + 7917278 7917294 8.0E-06 CATCTCCAGACAGTGGC 17
V_FOXA2_03_M02260 TRANSFAC + 7917081 7917092 1.0E-06 TATTTACTTAGA 12
V_FOX_Q2_M00809 TRANSFAC + 7917078 7917090 1.0E-06 TAATATTTACTTA 13
V_RSRFC4_01_M00026 TRANSFAC + 7918857 7918872 8.0E-06 TTTCTATTCTTAGTTT 16
V_ESRRA_03_M02748 TRANSFAC + 7917233 7917249 3.0E-06 TTTTAAAGGTCAAATTC 17
V_RARA_03_M02787 TRANSFAC + 7917233 7917248 0.0E+00 TTTTAAAGGTCAAATT 16
V_MYF6_03_M02781 TRANSFAC - 7924732 7924747 5.0E-06 ATATAACAGGTGACCG 16
V_HFH3_01_M00289 TRANSFAC + 7917078 7917090 3.0E-06 TAATATTTACTTA 13
V_FOXJ2_01_M00422 TRANSFAC - 7917076 7917093 0.0E+00 CTCTAAGTAAATATTAAT 18
V_FOXO1_04_M01969 TRANSFAC + 7918965 7918984 5.0E-06 TAAAAACTCAACTAGTTGAT 20
V_HOMEZ_01_M01429 TRANSFAC - 7917027 7917043 5.0E-06 TTAAGATCGTTTTCTCT 17
V_PR_02_M00957 TRANSFAC + 7917354 7917380 2.0E-06 TTAAACAGTATTTTCTGTTCTGAGGAT 27
V_HOXC10_01_M01361 TRANSFAC - 7917109 7917124 5.0E-06 TCTTGTCATAAAGCTT 16
V_SOX15_04_M02903 TRANSFAC + 7924742 7924756 2.0E-06 TTATATGAAATTCCC 15
V_SRY_05_M02917 TRANSFAC + 7917095 7917111 2.0E-06 TAGAGAAACAATGAAAG 17
V_MEF2_01_M00006 TRANSFAC - 7917225 7917240 1.0E-06 CTTTAAAAATGTCCCT 16
V_GATA5_03_M02756 TRANSFAC + 7918976 7918992 9.0E-06 CTAGTTGATAATAAAAT 17
V_HMEF2_Q6_M00406 TRANSFAC - 7917225 7917240 6.0E-06 CTTTAAAAATGTCCCT 16
V_CEBP_Q2_01_M00912 TRANSFAC - 7917952 7917963 2.0E-06 ATTACACAACTT 12
V_CEBP_Q2_01_M00912 TRANSFAC + 7918946 7918957 5.0E-06 ATTGCAAAATGT 12
V_BRN3C_01_M01408 TRANSFAC - 7917070 7917085 5.0E-06 AAATATTAATGCCTTC 16
V_HOXD10_01_M01375 TRANSFAC + 7917071 7917087 6.0E-06 AAGGCATTAATATTTAC 17
V_HOXD10_01_M01375 TRANSFAC + 7918958 7918974 5.0E-06 ATTGCAATAAAAACTCA 17
V_HOXD10_01_M01375 TRANSFAC + 7918980 7918996 8.0E-06 TTGATAATAAAATAGCA 17
V_CEBPE_01_M01772 TRANSFAC - 7918946 7918955 8.0E-06 ATTTTGCAAT 10
V_COUP_DR1_Q6_M00765 TRANSFAC + 7924701 7924713 3.0E-06 TGACCTGTGGCCA 13
V_CEBPG_Q6_01_M01869 TRANSFAC + 7918945 7918956 1.0E-06 CATTGCAAAATG 12
V_PAX4_04_M00380 TRANSFAC - 7924782 7924811 2.0E-06 AAAAATAGATTTGATCCATATCCTCTCTCC 30
V_RFX1_02_M00281 TRANSFAC + 7917319 7917336 9.0E-06 CAGTCACTTTAGTAACTG 18
V_CEBPA_Q6_M01866 TRANSFAC - 7918945 7918957 6.0E-06 ACATTTTGCAATG 13
V_NANOG_02_M01247 TRANSFAC + 7917094 7917113 2.0E-06 CTAGAGAAACAATGAAAGCT 20
V_NANOG_02_M01247 TRANSFAC - 7918855 7918874 5.0E-06 TGAAACTAAGAATAGAAATT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL