Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GPR173 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54328 G protein-coupled receptor 173 chrX + 53073505 - 53079005 53078505 Transcription Factor Binding Sites   Download all TFBS in the GPR173 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 53074349 53074357 4.0E-06 GCAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 53074349 53074358 7.0E-06 GCAATAAAAG 10 Foxa2_MA0047.2 JASPAR + 53074333 53074344 1.0E-06 TGTTTACTTTTG 12 IRF7_IRF_DBD_dimeric_14_1 SELEX + 53083295 53083308 4.0E-06 ATAAAAGTGAAAGT 14 FOXA1_MA0148.1 JASPAR + 53074333 53074343 0.0E+00 TGTTTACTTTT 11 FOXF2_MA0030.1 JASPAR - 53074331 53074344 1.0E-06 CAAAAGTAAACACT 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 53074331 53074342 3.0E-06 AAAGTAAACACT 12 EWSR1-FLI1_MA0149.1 JASPAR - 53077623 53077640 5.0E-06 GGGAAGGAGGAAGGCTGA 18 EWSR1-FLI1_MA0149.1 JASPAR - 53077627 53077644 1.0E-06 GGGAGGGAAGGAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 53077630 53077647 4.0E-06 AGAGGGAGGGAAGGAGGA 18 EWSR1-FLI1_MA0149.1 JASPAR - 53077648 53077665 6.0E-06 GGAGGGAGGCAGGGAGGG 18 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 53080227 53080242 5.0E-06 CAACCACTGACCACAG 16 IRF1_MA0050.1 JASPAR + 53083297 53083308 1.0E-06 AAAAGTGAAAGT 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 53074348 53074357 5.0E-06 TGCAATAAAA 10 RUNX2_RUNX_DBD_dimeric_16_1 SELEX - 53080227 53080242 7.0E-06 CAACCACTGACCACAG 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 53074349 53074357 3.0E-06 GCAATAAAA 9 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 53083351 53083367 5.0E-06 GACTGGTATATCTGGTG 17 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 53074348 53074358 6.0E-06 TGCAATAAAAG 11 SP1_MA0079.2 JASPAR + 53077550 53077559 7.0E-06 CCCCGCCCCC 10 SP1_C2H2_DBD_monomeric_11_1 SELEX + 53077966 53077976 7.0E-06 ACCCCACCCCC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 53074333 53074343 9.0E-06 AAAAGTAAACA 11 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 53083296 53083310 0.0E+00 TAAAAGTGAAAGTAT 15 Myf_MA0055.1 JASPAR - 53078012 53078023 6.0E-06 AGGCAGCAGCAG 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 53074326 53074336 8.0E-06 AACACTTAAGA 11 SPDEF_ETS_full_monomeric_11_1 SELEX + 53077917 53077927 5.0E-06 ACCCGGATCTA 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 53074349 53074357 3.0E-06 GCAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 53074333 53074345 7.0E-06 GCAAAAGTAAACA 13 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 53074349 53074357 3.0E-06 GCAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 53074348 53074358 8.0E-06 TGCAATAAAAG 11 IRF2_MA0051.1 JASPAR + 53083296 53083313 0.0E+00 TAAAAGTGAAAGTATCTT 18 V_FOXP1_01_M00987 TRANSFAC + 53083328 53083347 4.0E-06 GTATGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 53083330 53083349 5.0E-06 ATGTGTGTGTGTGTGTGTGT 20 V_HNF3B_01_M00131 TRANSFAC + 53074328 53074342 1.0E-06 TTAAGTGTTTACTTT 15 V_AML_Q6_M00769 TRANSFAC + 53083375 53083389 1.0E-06 AAGGATGTGGTCTGC 15 V_FOXA2_04_M02749 TRANSFAC - 53074328 53074344 2.0E-06 CAAAAGTAAACACTTAA 17 V_NKX29_01_M01352 TRANSFAC + 53074387 53074403 0.0E+00 AGAAAAGTACTTGAAGT 17 V_DEAF1_02_M01002 TRANSFAC - 53077431 53077455 1.0E-06 TCAGGCTCGGGCCTTTCTGAGATGC 25 V_MMEF2_Q6_M00405 TRANSFAC + 53076582 53076597 3.0E-06 GGGCATAAAAATGACC 16 V_MMEF2_Q6_M00405 TRANSFAC + 53083287 53083302 9.0E-06 GTGTATATATAAAAGT 16 V_SP1_Q6_01_M00931 TRANSFAC - 53077573 53077582 4.0E-06 GGGGCGGGGC 10 V_IRF_Q6_01_M00972 TRANSFAC + 53083297 53083307 0.0E+00 AAAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 53083295 53083310 0.0E+00 ATAAAAGTGAAAGTAT 16 V_HNF3_Q6_01_M01012 TRANSFAC + 53074328 53074345 0.0E+00 TTAAGTGTTTACTTTTGC 18 V_FOXJ1_03_M02750 TRANSFAC - 53074327 53074342 3.0E-06 AAAGTAAACACTTAAG 16 V_SP1_03_M02281 TRANSFAC + 53077550 53077559 7.0E-06 CCCCGCCCCC 10 V_HFH4_01_M00742 TRANSFAC + 53074330 53074342 7.0E-06 AAGTGTTTACTTT 13 V_SP1_02_M01303 TRANSFAC - 53077548 53077558 3.0E-06 GGGGCGGGGGG 11 V_SP1_02_M01303 TRANSFAC - 53077567 53077577 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 53077965 53077975 5.0E-06 GGGGTGGGGTG 11 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 53080228 53080242 7.0E-06 TGTGGTCAGTGGTTG 15 V_ZNF219_01_M01122 TRANSFAC + 53077546 53077557 5.0E-06 CACCCCCCGCCC 12 V_ZNF219_01_M01122 TRANSFAC + 53077553 53077564 1.0E-06 CGCCCCCCCCCC 12 V_TCF3_04_M02816 TRANSFAC + 53083290 53083306 9.0E-06 TATATATAAAAGTGAAA 17 V_MYF_01_M01302 TRANSFAC - 53078012 53078023 6.0E-06 AGGCAGCAGCAG 12 V_NKX31_02_M02782 TRANSFAC - 53074324 53074340 9.0E-06 AGTAAACACTTAAGAGA 17 V_IRF2_01_M00063 TRANSFAC + 53083296 53083308 1.0E-06 TAAAAGTGAAAGT 13 V_KROX_Q6_M00982 TRANSFAC + 53077551 53077564 1.0E-06 CCCGCCCCCCCCCC 14 V_RSRFC4_Q2_M00407 TRANSFAC + 53083286 53083302 8.0E-06 TGTGTATATATAAAAGT 17 V_HOXA3_07_M02869 TRANSFAC - 53083310 53083323 3.0E-06 ACACTCTATTAAGA 14 V_SP1_Q6_M00196 TRANSFAC - 53077548 53077560 6.0E-06 GGGGGGCGGGGGG 13 V_IRF3_Q3_M01279 TRANSFAC - 53083298 53083310 5.0E-06 ATACTTTCACTTT 13 V_HNF3A_01_M01261 TRANSFAC - 53074332 53074341 3.0E-06 AAGTAAACAC 10 V_MAZ_Q6_01_M02023 TRANSFAC - 53077633 53077646 1.0E-06 GAGGGAGGGAAGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 53077963 53077976 6.0E-06 GGGGGTGGGGTGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 53077989 53078002 8.0E-06 TGGGGAGGGGATGG 14 V_HNF3_Q6_M00791 TRANSFAC - 53074331 53074343 4.0E-06 AAAAGTAAACACT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 53074333 53074343 3.0E-06 TGTTTACTTTT 11 V_IRF_Q6_M00772 TRANSFAC - 53083297 53083311 0.0E+00 GATACTTTCACTTTT 15 V_NFE4_Q5_M02105 TRANSFAC - 53077703 53077714 8.0E-06 CCCCCTCTCCTC 12 V_OCT1_04_M00138 TRANSFAC - 53074333 53074355 9.0E-06 TTATTGCAAGGCAAAAGTAAACA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 53077552 53077562 4.0E-06 CCGCCCCCCCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 53077555 53077565 7.0E-06 CCCCCCCCCCC 11 V_RREB1_01_M00257 TRANSFAC + 53077998 53078011 8.0E-06 CCCCAACACCACCT 14 V_TBP_06_M02814 TRANSFAC + 53083286 53083301 5.0E-06 TGTGTATATATAAAAG 16 V_TBP_06_M02814 TRANSFAC - 53083286 53083301 1.0E-06 CTTTTATATATACACA 16 V_TBP_06_M02814 TRANSFAC + 53083288 53083303 4.0E-06 TGTATATATAAAAGTG 16 V_TBP_06_M02814 TRANSFAC - 53083288 53083303 7.0E-06 CACTTTTATATATACA 16 V_BLIMP1_Q6_M01066 TRANSFAC + 53083295 53083310 1.0E-06 ATAAAAGTGAAAGTAT 16 V_NKX23_01_M01457 TRANSFAC - 53074387 53074402 5.0E-06 CTTCAAGTACTTTTCT 16 V_ICSBP_Q6_M00699 TRANSFAC + 53083298 53083309 1.0E-06 AAAGTGAAAGTA 12 V_GATA4_Q3_M00632 TRANSFAC + 53083293 53083304 4.0E-06 ATATAAAAGTGA 12 V_TFIII_Q6_M00706 TRANSFAC - 53077639 53077647 6.0E-06 AGAGGGAGG 9 V_BCL6B_04_M02844 TRANSFAC + 53077991 53078006 8.0E-06 ATCCCCTCCCCAACAC 16 V_SP4_Q5_M01273 TRANSFAC + 53077549 53077559 5.0E-06 CCCCCGCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 53074329 53074344 2.0E-06 CAAAAGTAAACACTTA 16 V_TTF1_Q5_M02034 TRANSFAC - 53074324 53074337 2.0E-06 AAACACTTAAGAGA 14 V_FOXL1_04_M02753 TRANSFAC - 53074328 53074344 6.0E-06 CAAAAGTAAACACTTAA 17 V_NKX3A_02_M01383 TRANSFAC + 53074387 53074403 4.0E-06 AGAAAAGTACTTGAAGT 17 V_NKX22_01_M00485 TRANSFAC + 53074328 53074337 2.0E-06 TTAAGTGTTT 10 V_NKX22_01_M00485 TRANSFAC - 53074391 53074400 6.0E-06 TCAAGTACTT 10 V_FPM315_01_M01587 TRANSFAC - 53077660 53077671 4.0E-06 GGAGGAGGAGGG 12 V_FOXO3_01_M00477 TRANSFAC + 53074329 53074342 6.0E-06 TAAGTGTTTACTTT 14 V_FOXA2_03_M02260 TRANSFAC + 53074333 53074344 1.0E-06 TGTTTACTTTTG 12 V_ZFP281_01_M01597 TRANSFAC - 53077967 53077977 5.0E-06 AGGGGGTGGGG 11 V_EGR1_06_M02744 TRANSFAC + 53077968 53077981 1.0E-05 CCCACCCCCTCTTT 14 V_IRF1_Q6_01_M01881 TRANSFAC - 53083296 53083309 0.0E+00 TACTTTCACTTTTA 14 V_DMRT2_01_M01147 TRANSFAC - 53083302 53083317 4.0E-06 TATTAAGATACTTTCA 16 V_EWSR1FLI1_01_M02252 TRANSFAC - 53077623 53077640 5.0E-06 GGGAAGGAGGAAGGCTGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 53077627 53077644 1.0E-06 GGGAGGGAAGGAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 53077630 53077647 4.0E-06 AGAGGGAGGGAAGGAGGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 53077648 53077665 6.0E-06 GGAGGGAGGCAGGGAGGG 18 V_FOXJ2_01_M00422 TRANSFAC - 53074328 53074345 2.0E-06 GCAAAAGTAAACACTTAA 18 V_SIX6_08_M02897 TRANSFAC - 53083285 53083301 2.0E-06 CTTTTATATATACACAC 17 V_SIX6_08_M02897 TRANSFAC + 53083286 53083302 7.0E-06 TGTGTATATATAAAAGT 17 V_IRF1_01_M00062 TRANSFAC + 53083296 53083308 1.0E-06 TAAAAGTGAAAGT 13 V_FREAC4_01_M00292 TRANSFAC - 53074329 53074344 1.0E-06 CAAAAGTAAACACTTA 16 V_SP1_Q2_01_M00933 TRANSFAC + 53077550 53077559 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 53077992 53078005 8.0E-06 TGTTGGGGAGGGGA 14 V_ZFP128_04_M02932 TRANSFAC + 53083286 53083299 0.0E+00 TGTGTATATATAAA 14 V_ZFP128_04_M02932 TRANSFAC - 53083286 53083299 1.0E-06 TTTATATATACACA 14 V_ZFP128_04_M02932 TRANSFAC + 53083288 53083301 1.0E-06 TGTATATATAAAAG 14 V_ZFP128_04_M02932 TRANSFAC - 53083288 53083301 9.0E-06 CTTTTATATATACA 14 V_FOXK1_03_M02752 TRANSFAC - 53074328 53074344 6.0E-06 CAAAAGTAAACACTTAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.