Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SNTG1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
54212 syntrophin, gamma 1 chr8 +50819596 - 50825096 50824596

Transcription Factor Binding Sites

 
Download all TFBS in the SNTG1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
IRF7_IRF_DBD_dimeric_14_1 SELEX + 50826513 50826526 2.0E-06 CACAAAGTGAAAGT 14
MAFF_bZIP_DBD_dimeric_15_1 SELEX + 50822413 50822427 9.0E-06 TTGCTGCTGCAGCAA 15
Pax4_MA0068.1 JASPAR + 50826563 50826592 8.0E-06 AAATATGTAACTCTAATTCACCCCAAACTC 30
IRF1_MA0050.1 JASPAR + 50826515 50826526 2.0E-06 CAAAGTGAAAGT 12
HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 50822430 50822445 5.0E-06 TGGCTCAAAGTCCAAC 16
ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 50822287 50822301 2.0E-06 TGCACACGCAGGAAA 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 50826514 50826528 0.0E+00 ACAAAGTGAAAGTTA 15
GSC_homeodomain_full_monomeric_10_1 SELEX + 50826535 50826544 2.0E-06 CCTAATCCCT 10
IRF3_IRF_full_trimeric_21_1 SELEX - 50822482 50822502 7.0E-06 TCGGGACGGAAAACCAAACAG 21
Zfx_MA0146.1 JASPAR + 50822312 50822325 9.0E-06 GCGACCGCGGCCTG 14
V_MINI20_B_M00324 TRANSFAC + 50823435 50823455 9.0E-06 TTCTGCCCCCACTGCAGGAGC 21
V_CEBPG_Q6_M00622 TRANSFAC - 50823417 50823429 0.0E+00 CTTATTTCACAAA 13
V_NF1_Q6_01_M00806 TRANSFAC + 50823202 50823218 7.0E-06 TCAGCCAGTTGCCAAGA 17
V_EVI1_04_M00081 TRANSFAC - 50823958 50823972 5.0E-06 AGAAATGAAAGAAAA 15
V_IRF_Q6_01_M00972 TRANSFAC - 50823962 50823972 6.0E-06 AGAAATGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 50823959 50823974 4.0E-06 CCAGAAATGAAAGAAA 16
V_IRF2_Q6_M01882 TRANSFAC + 50826513 50826528 2.0E-06 CACAAAGTGAAAGTTA 16
V_HNF4_Q6_M00967 TRANSFAC + 50822436 50822444 2.0E-06 AAAGTCCAA 9
V_GTF2IRD1_01_M01229 TRANSFAC - 50826535 50826543 7.0E-06 GGGATTAGG 9
V_PU1_Q4_M01172 TRANSFAC - 50822744 50822762 6.0E-06 AGGTTCTTCTTCCTGTTCT 19
V_TCFAP2C_04_M02925 TRANSFAC + 50822257 50822270 6.0E-06 TTGACCAAGGGCTT 14
V_FREAC3_01_M00291 TRANSFAC + 50822464 50822479 5.0E-06 TGTGAGTAAATACGCG 16
V_E4BP4_01_M00045 TRANSFAC + 50826563 50826574 1.0E-05 AAATATGTAACT 12
V_NGFIC_01_M00244 TRANSFAC + 50822699 50822710 9.0E-06 AAGCGTGGGAGG 12
V_IRF_Q6_M00772 TRANSFAC + 50823958 50823972 1.0E-06 TTTTCTTTCATTTCT 15
V_IRF_Q6_M00772 TRANSFAC - 50826515 50826529 7.0E-06 GTAACTTTCACTTTG 15
V_BBX_04_M02843 TRANSFAC - 50822227 50822243 5.0E-06 TCTTTTTTAACAGAGGA 17
V_HNF4A_Q6_01_M02016 TRANSFAC + 50822432 50822446 7.0E-06 GCTCAAAGTCCAACC 15
V_HNF4_DR1_Q3_M00764 TRANSFAC - 50822431 50822443 6.0E-06 TGGACTTTGAGCC 13
V_HNF4A_02_M02868 TRANSFAC + 50822432 50822447 3.0E-06 GCTCAAAGTCCAACCA 16
V_PTF1BETA_Q6_M00657 TRANSFAC + 50822707 50822720 4.0E-06 GAGGAAAGCACAAC 14
V_OTX2_Q3_M01719 TRANSFAC - 50822679 50822691 4.0E-06 TCAAGGATTAGAG 13
V_OTX2_Q3_M01719 TRANSFAC - 50826534 50826546 1.0E-05 TAAGGGATTAGGC 13
V_ELF1_Q6_M00746 TRANSFAC + 50822744 50822755 6.0E-06 AGAACAGGAAGA 12
V_TAL1_01_M01591 TRANSFAC - 50824172 50824184 1.0E-05 CTTCCTTGTCTTC 13
V_HNF4_Q6_01_M01031 TRANSFAC + 50822431 50822444 5.0E-06 GGCTCAAAGTCCAA 14
V_CEBPB_Q6_M01896 TRANSFAC + 50823418 50823427 4.0E-06 TTGTGAAATA 10
V_IRF1_Q6_01_M01881 TRANSFAC - 50826514 50826527 1.0E-06 AACTTTCACTTTGT 14
V_DR3_Q4_M00966 TRANSFAC - 50822251 50822271 3.0E-06 GAAGCCCTTGGTCAACTTTCT 21
V_PITX2_01_M01447 TRANSFAC - 50826531 50826547 8.0E-06 CTAAGGGATTAGGCAAA 17
V_SOX15_04_M02903 TRANSFAC + 50826500 50826514 5.0E-06 GTAACTGAAATCTCA 15
V_GLIS2_04_M02863 TRANSFAC + 50822230 50822243 7.0E-06 TCTGTTAAAAAAGA 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL