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MRPL39 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54148 mitochondrial ribosomal protein L39 chr21 - 26979301 - 26984801 26979801 Transcription Factor Binding Sites   Download all TFBS in the MRPL39 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 26980652 26980669 5.0E-06 GATGGAAATATTTTCATT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 26980652 26980669 3.0E-06 AATGAAAATATTTCCATC 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 26980980 26980997 0.0E+00 AATGTACATATATACATA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 26980980 26980997 1.0E-06 TATGTATATATGTACATT 18 CTCF_MA0139.1 JASPAR + 26980757 26980775 1.0E-06 CCGCCACCAGGTGGAAGTG 19 Sox17_MA0078.1 JASPAR + 26980583 26980591 7.0E-06 CTCATTGTC 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 26980660 26980672 7.0E-06 GTAAATGAAAATA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 26980983 26980995 7.0E-06 GTACATATATACA 13 MYF6_bHLH_full_dimeric_10_1 SELEX + 26980528 26980537 8.0E-06 AACAGATGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 26980528 26980537 7.0E-06 AACATCTGTT 10 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 26981035 26981043 2.0E-06 TATGCAAAT 9 Tp53_p53l_DBD_dimeric_18_2 SELEX + 26979383 26979400 8.0E-06 AACCTGCCAAGGCAAGTA 18 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 26980659 26980669 5.0E-06 AATGAAAATAT 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 26981035 26981043 2.0E-06 TATGCAAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 26981032 26981045 2.0E-06 TGTATGCAAATTTG 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 26981034 26981044 1.0E-06 GTATGCAAATT 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 26981035 26981043 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 26981035 26981043 2.0E-06 TATGCAAAT 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 26980654 26980667 5.0E-06 TGAAAATATTTCCA 14 Pax4_MA0068.1 JASPAR + 26980657 26980686 7.0E-06 AAATATTTTCATTTACAGTAGTTTAATTCT 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 26980666 26980681 8.0E-06 TAAACTACTGTAAATG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 26980666 26980681 7.0E-06 TAAACTACTGTAAATG 16 POU3F3_POU_DBD_monomeric_13_1 SELEX - 26981033 26981045 0.0E+00 TGTATGCAAATTT 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 26980654 26980667 6.0E-06 TGAAAATATTTCCA 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 26980526 26980539 4.0E-06 GAAACATCTGTTGA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 26980654 26980667 2.0E-06 TGGAAATATTTTCA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 26980654 26980667 3.0E-06 TGAAAATATTTCCA 14 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 26979861 26979877 6.0E-06 TTCCGCAGGACAGGTCT 17 TBX4_TBX_DBD_dimeric_20_1 SELEX + 26980864 26980883 1.0E-05 AAGTGTAAGTATCTTCACTT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 26980864 26980883 8.0E-06 AAGTGAAGATACTTACACTT 20 POU3F1_POU_DBD_monomeric_12_1 SELEX - 26981033 26981044 1.0E-06 GTATGCAAATTT 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 26980861 26980875 6.0E-06 GGAAAGTGTAAGTAT 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 26980654 26980667 3.0E-06 TGGAAATATTTTCA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 26980654 26980667 3.0E-06 TGAAAATATTTCCA 14 Hltf_MA0109.1 JASPAR - 26980167 26980176 4.0E-06 AACCATATAT 10 POU2F1_POU_DBD_monomeric_12_1 SELEX - 26981034 26981045 1.0E-06 TGTATGCAAATT 12 IRF5_IRF_full_dimeric_14_1 SELEX + 26979837 26979850 9.0E-06 CGGAAACCGAACGC 14 RUNX1_MA0002.2 JASPAR + 26980683 26980693 8.0E-06 TTCTGTGGCTT 11 POU3F2_POU_DBD_monomeric_12_1 SELEX - 26981033 26981044 1.0E-06 GTATGCAAATTT 12 FOXL1_MA0033.1 JASPAR + 26980990 26980997 5.0E-06 TATACATA 8 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 26980660 26980672 1.0E-06 GTAAATGAAAATA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 26980987 26980997 3.0E-06 TATGTATATAT 11 IRF2_MA0051.1 JASPAR + 26980861 26980878 4.0E-06 GGAAAGTGTAAGTATCTT 18 V_RUSH1A_02_M01107 TRANSFAC - 26980167 26980176 4.0E-06 AACCATATAT 10 V_CEBPG_Q6_M00622 TRANSFAC - 26980623 26980635 3.0E-06 CTTACTTCAAATA 13 V_OSR1_03_M02784 TRANSFAC + 26980667 26980682 4.0E-06 ATTTACAGTAGTTTAA 16 V_HNF3B_01_M00131 TRANSFAC + 26980655 26980669 2.0E-06 GGAAATATTTTCATT 15 V_SMAD3_Q6_01_M01888 TRANSFAC + 26979659 26979671 2.0E-06 AGACAGACACCAC 13 TAL1_TCF3_MA0091.1 JASPAR - 26980528 26980539 2.0E-06 GAAACATCTGTT 12 V_OCT1_Q5_01_M00930 TRANSFAC + 26980659 26980669 8.0E-06 ATATTTTCATT 11 V_OCT1_Q5_01_M00930 TRANSFAC + 26981033 26981043 1.0E-06 AAATTTGCATA 11 V_OCT1_01_M00135 TRANSFAC - 26981030 26981048 0.0E+00 AACTGTATGCAAATTTGAG 19 V_POU2F3_01_M01476 TRANSFAC - 26981031 26981046 0.0E+00 CTGTATGCAAATTTGA 16 V_POU1F1_Q6_M00744 TRANSFAC - 26980987 26980996 5.0E-06 ATGTATATAT 10 V_EAR2_Q2_M01728 TRANSFAC + 26980730 26980743 1.0E-06 TGTCCTTTGCCTTG 14 V_STAT6_01_M00494 TRANSFAC - 26980654 26980661 7.0E-06 TATTTCCA 8 V_OCT_C_M00210 TRANSFAC + 26981032 26981044 1.0E-06 CAAATTTGCATAC 13 V_NERF_Q2_M00531 TRANSFAC + 26980606 26980623 8.0E-06 TACCAGGACGTGAGTGTT 18 V_AFP1_Q6_M00616 TRANSFAC - 26980589 26980599 7.0E-06 AAAAATTAGAC 11 V_PU1_Q4_M01172 TRANSFAC + 26981018 26981036 1.0E-06 ATCTTTTGCTTCCTCAAAT 19 V_NFAT2_01_M01748 TRANSFAC + 26980653 26980661 6.0E-06 ATGGAAATA 9 V_PAX_Q6_M00808 TRANSFAC + 26979704 26979714 6.0E-06 CTGAAACTCAC 11 V_STAT4_Q4_M01666 TRANSFAC + 26979543 26979556 8.0E-06 TTCCCATAAATTAG 14 V_RUNX1_01_M02257 TRANSFAC + 26980683 26980693 8.0E-06 TTCTGTGGCTT 11 V_GFI1_01_M00250 TRANSFAC + 26979367 26979390 4.0E-06 AAAGGCCAAATCAGGGAACCTGCC 24 V_IRX4_01_M01410 TRANSFAC - 26980979 26980995 9.0E-06 TGTATATATGTACATTT 17 V_AP2BETA_Q3_M01858 TRANSFAC - 26980104 26980119 3.0E-06 GCGGAGGGCTGAAGGC 16 V_PAX5_01_M00143 TRANSFAC + 26980470 26980497 6.0E-06 CTCTAGTTCACTGATGTATCCCAAGCGC 28 V_MATH1_Q2_M01716 TRANSFAC - 26980761 26980770 9.0E-06 CCACCTGGTG 10 V_SFPI1_04_M02896 TRANSFAC + 26979373 26979386 4.0E-06 CAAATCAGGGAACC 14 V_SFPI1_04_M02896 TRANSFAC - 26981025 26981038 7.0E-06 AAATTTGAGGAAGC 14 V_OCT1_04_M00138 TRANSFAC - 26980654 26980676 2.0E-06 TACTGTAAATGAAAATATTTCCA 23 V_OCT1_04_M00138 TRANSFAC - 26980660 26980682 3.0E-06 TTAAACTACTGTAAATGAAAATA 23 V_OCT1_04_M00138 TRANSFAC - 26981028 26981050 5.0E-06 GGAACTGTATGCAAATTTGAGGA 23 V_HBP1_03_M02762 TRANSFAC + 26980537 26980552 0.0E+00 TTCTTGAATGAATGAA 16 V_HBP1_03_M02762 TRANSFAC + 26980541 26980556 0.0E+00 TGAATGAATGAATGAA 16 V_HBP1_03_M02762 TRANSFAC + 26980545 26980560 0.0E+00 TGAATGAATGAATGAA 16 V_HBP1_03_M02762 TRANSFAC + 26980549 26980564 0.0E+00 TGAATGAATGAATGCC 16 V_TAL1BETAE47_01_M00065 TRANSFAC + 26980525 26980540 1.0E-06 CTCAACAGATGTTTCT 16 V_PAX8_01_M00717 TRANSFAC + 26980535 26980549 7.0E-06 GTTTCTTGAATGAAT 15 V_HNF4_DR1_Q3_M00764 TRANSFAC + 26980730 26980742 8.0E-06 TGTCCTTTGCCTT 13 V_CTCF_02_M01259 TRANSFAC + 26980754 26980773 3.0E-06 GCGCCGCCACCAGGTGGAAG 20 V_IRX3_01_M01318 TRANSFAC - 26980979 26980995 8.0E-06 TGTATATATGTACATTT 17 V_IRX3_01_M01318 TRANSFAC + 26980988 26981004 6.0E-06 TATATACATATAGTGTT 17 V_CTCF_01_M01200 TRANSFAC - 26980755 26980774 1.0E-05 ACTTCCACCTGGTGGCGGCG 20 V_CTCF_01_M01200 TRANSFAC + 26980756 26980775 0.0E+00 GCCGCCACCAGGTGGAAGTG 20 V_OCT1_B_M00342 TRANSFAC - 26981034 26981043 1.0E-06 TATGCAAATT 10 V_OCT_Q6_M00795 TRANSFAC + 26981033 26981043 1.0E-06 AAATTTGCATA 11 V_IRX5_01_M01472 TRANSFAC - 26980979 26980995 5.0E-06 TGTATATATGTACATTT 17 V_IRX5_01_M01472 TRANSFAC + 26980988 26981004 7.0E-06 TATATACATATAGTGTT 17 V_PAX8_B_M00328 TRANSFAC + 26980534 26980551 9.0E-06 TGTTTCTTGAATGAATGA 18 V_TAL1BETAITF2_01_M00070 TRANSFAC + 26980525 26980540 1.0E-06 CTCAACAGATGTTTCT 16 V_GR_Q6_02_M01836 TRANSFAC + 26980725 26980737 9.0E-06 CACTCTGTCCTTT 13 V_HBP1_04_M02866 TRANSFAC - 26980882 26980898 0.0E+00 ATTTCCCATTTTAAAAA 17 V_FXR_IR1_Q6_M00767 TRANSFAC + 26979354 26979366 4.0E-06 GAGTTTATATCCC 13 V_POU5F1_01_M01307 TRANSFAC - 26981034 26981043 6.0E-06 TATGCAAATT 10 V_OCT2_01_M01368 TRANSFAC - 26981031 26981046 0.0E+00 CTGTATGCAAATTTGA 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 26980525 26980540 6.0E-06 CTCAACAGATGTTTCT 16 V_OCT1_Q6_M00195 TRANSFAC - 26981032 26981046 9.0E-06 CTGTATGCAAATTTG 15 V_AIRE_01_M00999 TRANSFAC + 26980422 26980447 5.0E-06 TATAGTATAGGATGTATAGGAGAAGG 26 V_BDP1_01_M01796 TRANSFAC - 26980120 26980131 4.0E-06 GGGATCGAACCC 12 V_FPM315_01_M01587 TRANSFAC - 26979603 26979614 4.0E-06 GAAGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC - 26979826 26979837 1.0E-06 GGGGGAGGAGGG 12 V_P53_05_M01655 TRANSFAC + 26979382 26979401 4.0E-06 GAACCTGCCAAGGCAAGTAC 20 V_P53_05_M01655 TRANSFAC - 26979382 26979401 2.0E-06 GTACTTGCCTTGGCAGGTTC 20 V_SMAD_Q6_01_M00974 TRANSFAC + 26979658 26979668 6.0E-06 TAGACAGACAC 11 V_BBX_03_M02739 TRANSFAC + 26980473 26980487 4.0E-06 TAGTTCACTGATGTA 15 V_BBX_03_M02739 TRANSFAC - 26980473 26980487 5.0E-06 TACATCAGTGAACTA 15 V_BBX_03_M02739 TRANSFAC - 26980537 26980551 4.0E-06 TCATTCATTCAAGAA 15 V_OCT1_06_M00162 TRANSFAC + 26980658 26980671 5.0E-06 AATATTTTCATTTA 14 V_OCT1_06_M00162 TRANSFAC + 26981032 26981045 3.0E-06 CAAATTTGCATACA 14 V_IRX2_01_M01405 TRANSFAC - 26980979 26980995 1.0E-05 TGTATATATGTACATTT 17 V_IRX2_01_M01405 TRANSFAC + 26980988 26981004 9.0E-06 TATATACATATAGTGTT 17 V_OCT1_07_M00248 TRANSFAC - 26981034 26981045 0.0E+00 TGTATGCAAATT 12 V_IRF1_Q6_01_M01881 TRANSFAC + 26980660 26980673 8.0E-06 TATTTTCATTTACA 14 V_SIX6_08_M02897 TRANSFAC + 26980980 26980996 7.0E-06 AATGTACATATATACAT 17 V_SIX6_08_M02897 TRANSFAC + 26980982 26980998 9.0E-06 TGTACATATATACATAT 17 V_SMAD3_Q6_M00701 TRANSFAC - 26979659 26979667 3.0E-06 TGTCTGTCT 9 V_YY1_01_M00059 TRANSFAC - 26980163 26980179 7.0E-06 GAAAACCATATATTCTT 17 V_PAX4_02_M00377 TRANSFAC - 26980590 26980600 6.0E-06 GAAAAATTAGA 11 V_LHX9_01_M01367 TRANSFAC + 26979545 26979561 6.0E-06 CCCATAAATTAGTCCTC 17 V_MEF2_01_M00006 TRANSFAC + 26979702 26979717 9.0E-06 CTCTGAAACTCACTCC 16 V_GATA1_02_M00126 TRANSFAC - 26979667 26979680 1.0E-05 GCCTAGATAGTGGT 14 V_ZFP128_04_M02932 TRANSFAC + 26980982 26980995 3.0E-06 TGTACATATATACA 14 V_ZFP128_04_M02932 TRANSFAC - 26980982 26980995 3.0E-06 TGTATATATGTACA 14 V_ZFP128_04_M02932 TRANSFAC + 26980988 26981001 3.0E-06 TATATACATATAGT 14 V_TCF11MAFG_01_M00284 TRANSFAC - 26981018 26981039 6.0E-06 CAAATTTGAGGAAGCAAAAGAT 22 V_IRXB3_01_M01377 TRANSFAC - 26980979 26980995 3.0E-06 TGTATATATGTACATTT 17 V_IRXB3_01_M01377 TRANSFAC + 26980980 26980996 2.0E-06 AATGTACATATATACAT 17 V_IRXB3_01_M01377 TRANSFAC - 26980987 26981003 5.0E-06 ACACTATATGTATATAT 17 V_IRXB3_01_M01377 TRANSFAC + 26980988 26981004 4.0E-06 TATATACATATAGTGTT 17 V_BRF1_01_M01747 TRANSFAC + 26980120 26980132 2.0E-06 GGGTTCGATCCCG 13

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