Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GPR88


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
54112 G protein-coupled receptor 88 chr1 +100998727 - 101004227 101003727

Transcription Factor Binding Sites

 
Download all TFBS in the GPR88 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Sox1_HMG_DBD_dimeric_14_1 SELEX + 101001856 101001869 1.0E-06 TGAATAGCAAGTCA 14
Sox1_HMG_DBD_dimeric_14_1 SELEX - 101001856 101001869 1.0E-06 TGACTTGCTATTCA 14
HOXC13_homeodomain_DBD_monomeric_11_1 SELEX - 101000992 101001002 4.0E-06 CCTCATAAAAC 11
HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 101001133 101001143 6.0E-06 GCTCATAAAAG 11
NFIA_NFI_full_dimeric_15_1 SELEX + 101008053 101008067 3.0E-06 CTGGCTCCATGCCAA 15
NFIA_NFI_full_dimeric_15_1 SELEX - 101008053 101008067 0.0E+00 TTGGCATGGAGCCAG 15
FOXF2_MA0030.1 JASPAR - 100999932 100999945 7.0E-06 GAATCATAAACATC 14
TEF_bZIP_DBD_dimeric_12_1 SELEX - 101001292 101001303 5.0E-06 ACTTACATAATA 12
HOXD13_homeodomain_DBD_monomeric_11_1 SELEX - 101000992 101001002 4.0E-06 CCTCATAAAAC 11
HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 101001133 101001143 6.0E-06 GCTCATAAAAG 11
Mafb_bZIP_DBD_monomeric_12_1 SELEX - 101001012 101001023 2.0E-06 AAAATGCTGATT 12
SOX8_HMG_full_dimeric_17_1 SELEX - 101001821 101001837 2.0E-06 TATCAAGTTTACTGATG 17
HLF_bZIP_full_dimeric_12_1 SELEX - 101001292 101001303 3.0E-06 ACTTACATAATA 12
NFIX_NFI_full_dimeric_15_2 SELEX + 101008053 101008067 0.0E+00 CTGGCTCCATGCCAA 15
NFIX_NFI_full_dimeric_15_2 SELEX - 101008053 101008067 4.0E-06 TTGGCATGGAGCCAG 15
POU1F1_POU_DBD_monomeric_14_1 SELEX - 101001813 101001826 8.0E-06 CTGATGTAAATGAG 14
NFIL3_MA0025.1 JASPAR - 101001291 101001301 8.0E-06 TTACATAATAT 11
NFIL3_MA0025.1 JASPAR + 101001294 101001304 3.0E-06 TTATGTAAGTT 11
SOX8_HMG_DBD_dimeric_14_1 SELEX + 101001856 101001869 2.0E-06 TGAATAGCAAGTCA 14
DBP_bZIP_full_dimeric_12_1 SELEX + 101001292 101001303 7.0E-06 TATTATGTAAGT 12
DBP_bZIP_full_dimeric_12_1 SELEX - 101001292 101001303 5.0E-06 ACTTACATAATA 12
SPIB_ETS_DBD_monomeric_14_1 SELEX + 101000934 101000947 9.0E-06 AGGAAGGGGAAGTG 14
POU3F3_POU_DBD_monomeric_13_1 SELEX - 101001011 101001023 6.0E-06 AAAATGCTGATTT 13
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 101000992 101001001 7.0E-06 CTCATAAAAC 10
MZF1_5-13_MA0057.1 JASPAR - 101001888 101001897 4.0E-06 GGAGGGGGAA 10
NRL_bZIP_DBD_monomeric_11_1 SELEX - 101001013 101001023 3.0E-06 AAAATGCTGAT 11
NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 101001292 101001303 2.0E-06 ACTTACATAATA 12
Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 101001133 101001144 6.0E-06 GCTCATAAAAGT 12
POU3F1_POU_DBD_monomeric_12_2 SELEX + 101000140 101000151 7.0E-06 TTAAATAAAATA 12
POU3F1_POU_DBD_monomeric_12_2 SELEX - 101001290 101001301 4.0E-06 TTACATAATATA 12
NFIB_NFI_full_dimeric_15_1 SELEX + 101008053 101008067 3.0E-06 CTGGCTCCATGCCAA 15
NFIB_NFI_full_dimeric_15_1 SELEX - 101008053 101008067 0.0E+00 TTGGCATGGAGCCAG 15
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 101000992 101001002 2.0E-06 CCTCATAAAAC 11
Pou5f1_MA0142.1 JASPAR - 101001816 101001830 6.0E-06 TTTACTGATGTAAAT 15
HOXA13_homeodomain_full_monomeric_11_1 SELEX - 101000992 101001002 1.0E-05 CCTCATAAAAC 11
SOX18_HMG_full_dimeric_15_3 SELEX - 101001798 101001812 9.0E-06 ATGAGTATTTGTCAT 15
IRF4_IRF_full_dimeric_15_1 SELEX + 101001832 101001846 5.0E-06 TTGATATCGAAACCT 15
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 101000993 101001001 1.0E-05 CTCATAAAA 9
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 101001134 101001142 1.0E-05 CTCATAAAA 9
MAFK_bZIP_full_monomeric_12_1 SELEX - 101001013 101001024 1.0E-06 AAAAATGCTGAT 12
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 101001758 101001776 2.0E-06 AAAACCTCAATAAGGACAA 19
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 101001758 101001776 2.0E-06 TTGTCCTTATTGAGGTTTT 19
ETV6_ETS_full_dimeric_15_1 SELEX + 101000933 101000947 3.0E-06 CAGGAAGGGGAAGTG 15
Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 101001290 101001301 7.0E-06 TTACATAATATA 12
V_CEBPG_Q6_M00622 TRANSFAC - 101000136 101000148 5.0E-06 TTTATTTAAGAGT 13
V_FREAC7_01_M00293 TRANSFAC - 100999930 100999945 4.0E-06 GAATCATAAACATCAT 16
V_FXR_Q3_M00631 TRANSFAC + 101001299 101001312 0.0E+00 TAAGTTCATTAACT 14
V_MAFK_03_M02776 TRANSFAC - 101001011 101001025 0.0E+00 CAAAAATGCTGATTT 15
V_ALX4_01_M00619 TRANSFAC + 101008035 101008047 4.0E-06 ACTGAGAATCATC 13
V_YY1_02_M00069 TRANSFAC - 101000080 101000099 5.0E-06 CTTGTGCCATCTTGTCCTTT 20
V_NRSF_Q4_M01028 TRANSFAC + 101005369 101005387 9.0E-06 GGCCTGTCGGTGCTGCTGC 19
V_NF1_Q6_01_M00806 TRANSFAC + 101008053 101008069 4.0E-06 CTGGCTCCATGCCAATG 17
V_NF1A_Q6_M02103 TRANSFAC - 101008052 101008067 3.0E-06 TTGGCATGGAGCCAGT 16
V_NF1A_Q6_M02103 TRANSFAC + 101008053 101008068 0.0E+00 CTGGCTCCATGCCAAT 16
V_MAFB_05_M02775 TRANSFAC - 101001008 101001024 3.0E-06 AAAAATGCTGATTTCAC 17
V_ETS_B_M00340 TRANSFAC + 101001392 101001405 4.0E-06 TGGAGGAAGTGTGT 14
V_POU5F1_02_M02245 TRANSFAC - 101001816 101001830 6.0E-06 TTTACTGATGTAAAT 15
V_IRF_Q6_01_M00972 TRANSFAC - 101001881 101001891 4.0E-06 GGAAGTGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 101001878 101001893 1.0E-06 GGGGAAGTGAAAGAAA 16
V_POU3F2_02_M00464 TRANSFAC - 101001306 101001315 9.0E-06 TTAAGTTAAT 10
V_HOXD1_01_M01448 TRANSFAC - 101001298 101001314 3.0E-06 TAAGTTAATGAACTTAC 17
V_HOXD1_01_M01448 TRANSFAC + 101001299 101001315 1.0E-06 TAAGTTCATTAACTTAA 17
V_MAF_Q6_M00648 TRANSFAC + 100999958 100999973 6.0E-06 AAAAAGGAAGCTGGCT 16
V_MAF_Q6_M00648 TRANSFAC + 101001391 101001406 8.0E-06 TTGGAGGAAGTGTGTG 16
V_HOXA2_01_M01402 TRANSFAC - 101001298 101001313 5.0E-06 AAGTTAATGAACTTAC 16
V_HOXA2_01_M01402 TRANSFAC + 101001300 101001315 2.0E-06 AAGTTCATTAACTTAA 16
V_NERF_Q2_M00531 TRANSFAC + 101001391 101001408 8.0E-06 TTGGAGGAAGTGTGTGTG 18
V_HEN1_01_M00068 TRANSFAC + 101003942 101003963 9.0E-06 ACTGATCCCAGCTGAGTTTCTC 22
V_PU1_Q4_M01172 TRANSFAC - 101000935 101000953 4.0E-06 ACAGCTCACTTCCCCTTCC 19
V_PU1_Q4_M01172 TRANSFAC + 101001879 101001897 1.0E-06 TTCTTTCACTTCCCCCTCC 19
V_HOXD13_01_M01404 TRANSFAC - 101000989 101001004 7.0E-06 AACCTCATAAAACTCC 16
V_ZFP691_03_M02833 TRANSFAC - 101000916 101000932 8.0E-06 ATGGAAGTGCTCATTTT 17
V_TCFAP2E_04_M02926 TRANSFAC + 101001309 101001322 3.0E-06 AACTTAAAACAAAA 14
V_HOXA13_03_M01430 TRANSFAC - 101000990 101001005 5.0E-06 CAACCTCATAAAACTC 16
V_HOXA13_03_M01430 TRANSFAC + 101001130 101001145 6.0E-06 GATGCTCATAAAAGTG 16
V_HOXC13_01_M01317 TRANSFAC - 101000990 101001005 2.0E-06 CAACCTCATAAAACTC 16
V_HOXC13_01_M01317 TRANSFAC + 101001130 101001145 2.0E-06 GATGCTCATAAAAGTG 16
V_CEBPB_01_M00109 TRANSFAC + 101001291 101001304 4.0E-06 ATATTATGTAAGTT 14
V_ELF4_04_M02850 TRANSFAC + 101000136 101000152 1.0E-06 ACTCTTAAATAAAATAC 17
V_ELF4_04_M02850 TRANSFAC + 101000138 101000154 2.0E-06 TCTTAAATAAAATACTA 17
V_ELF4_04_M02850 TRANSFAC + 101000139 101000155 4.0E-06 CTTAAATAAAATACTAC 17
V_HOXA6_01_M01392 TRANSFAC - 101001298 101001313 8.0E-06 AAGTTAATGAACTTAC 16
V_HOXA6_01_M01392 TRANSFAC + 101001300 101001315 5.0E-06 AAGTTCATTAACTTAA 16
V_IPF1_Q4_M00436 TRANSFAC - 101001302 101001313 6.0E-06 AAGTTAATGAAC 12
V_DBP_Q6_01_M01872 TRANSFAC + 101001294 101001301 5.0E-06 TTATGTAA 8
V_SPI1_03_M02078 TRANSFAC + 101000938 101000947 1.0E-05 AGGGGAAGTG 10
V_HOXB13_01_M01467 TRANSFAC - 101000989 101001004 3.0E-06 AACCTCATAAAACTCC 16
V_E4BP4_01_M00045 TRANSFAC + 101001292 101001303 3.0E-06 TATTATGTAAGT 12
V_ARID3A_02_M02839 TRANSFAC - 101001828 101001842 1.0E-06 TTCGATATCAAGTTT 15
V_HOXA1_01_M01487 TRANSFAC + 101001298 101001313 9.0E-06 GTAAGTTCATTAACTT 16
V_IRF_Q6_M00772 TRANSFAC + 101001877 101001891 1.0E-06 TTTTCTTTCACTTCC 15
V_OCT1_04_M00138 TRANSFAC - 101001006 101001028 3.0E-06 TTACAAAAATGCTGATTTCACCA 23
V_OCT1_04_M00138 TRANSFAC - 101001809 101001831 2.0E-06 GTTTACTGATGTAAATGAGATGA 23
V_OCT1_08_M01354 TRANSFAC + 101001298 101001313 5.0E-06 GTAAGTTCATTAACTT 16
V_OCT1_08_M01354 TRANSFAC - 101001300 101001315 3.0E-06 TTAAGTTAATGAACTT 16
V_IRF4_03_M02768 TRANSFAC + 101001834 101001848 7.0E-06 GATATCGAAACCTTC 15
V_ARID3A_04_M02735 TRANSFAC + 101000136 101000152 3.0E-06 ACTCTTAAATAAAATAC 17
V_TBP_06_M02814 TRANSFAC + 101000139 101000154 5.0E-06 CTTAAATAAAATACTA 16
V_HIC1_02_M01072 TRANSFAC + 101005226 101005240 2.0E-06 ACCAGTTGCCCGGCT 15
V_SOX11_03_M02795 TRANSFAC + 101001311 101001327 3.0E-06 CTTAAAACAAAAGGAAA 17
V_NEUROD_02_M01288 TRANSFAC + 101005399 101005410 7.0E-06 TTCCTGCTGGCC 12
V_VBP_01_M00228 TRANSFAC - 101001293 101001302 5.0E-06 CTTACATAAT 10
V_FREAC2_01_M00290 TRANSFAC - 100999930 100999945 7.0E-06 GAATCATAAACATCAT 16
V_IRF5_03_M02769 TRANSFAC + 101001833 101001847 3.0E-06 TGATATCGAAACCTT 15
V_FOXL1_02_M02857 TRANSFAC + 101001309 101001324 1.0E-06 AACTTAAAACAAAAGG 16
V_TCF1_06_M02815 TRANSFAC + 101001301 101001317 3.0E-06 AGTTCATTAACTTAAAA 17
V_BBX_03_M02739 TRANSFAC - 101000137 101000151 1.0E-05 TATTTTATTTAAGAG 15
V_IRF1_Q6_01_M01881 TRANSFAC + 101001879 101001892 8.0E-06 TTCTTTCACTTCCC 14
V_VAX1_01_M01397 TRANSFAC - 101001298 101001313 4.0E-06 AAGTTAATGAACTTAC 16
V_VAX1_01_M01397 TRANSFAC + 101001300 101001315 1.0E-06 AAGTTCATTAACTTAA 16
V_NMYC_01_M00055 TRANSFAC - 101005527 101005538 9.0E-06 CTCCACGTGTAG 12
V_ALX3_01_M01355 TRANSFAC - 101001298 101001314 9.0E-06 TAAGTTAATGAACTTAC 17
V_ALX3_01_M01355 TRANSFAC + 101001299 101001315 7.0E-06 TAAGTTCATTAACTTAA 17
V_SOX2_Q6_M01272 TRANSFAC - 101001312 101001327 7.0E-06 TTTCCTTTTGTTTTAA 16
V_PPARG_02_M00515 TRANSFAC + 101005192 101005214 9.0E-06 AAGCGGGTCAGCGTGCTCAACTT 23
V_CTF1_01_M01196 TRANSFAC - 101008053 101008066 5.0E-06 TGGCATGGAGCCAG 14
V_CTF1_01_M01196 TRANSFAC + 101008054 101008067 0.0E+00 TGGCTCCATGCCAA 14
V_HOXD3_01_M01338 TRANSFAC - 101001300 101001315 2.0E-06 TTAAGTTAATGAACTT 16
V_UF1H3BETA_Q6_M01068 TRANSFAC - 101001905 101001918 4.0E-06 GTTGGGGCAGGGGC 14
V_CEBP_Q2_01_M00912 TRANSFAC - 101001291 101001302 6.0E-06 CTTACATAATAT 12
V_LTF_Q6_M01692 TRANSFAC + 101003926 101003934 6.0E-06 GGCACTTGC 9
V_ALX3_02_M02943 TRANSFAC - 101001298 101001314 9.0E-06 TAAGTTAATGAACTTAC 17
V_ALX3_02_M02943 TRANSFAC + 101001299 101001315 7.0E-06 TAAGTTCATTAACTTAA 17
V_TCF3_05_M02920 TRANSFAC + 101000136 101000150 7.0E-06 ACTCTTAAATAAAAT 15
TLX1_NFIC_MA0119.1 JASPAR - 101008053 101008066 5.0E-06 TGGCATGGAGCCAG 14
TLX1_NFIC_MA0119.1 JASPAR + 101008054 101008067 0.0E+00 TGGCTCCATGCCAA 14
V_GLIS2_04_M02863 TRANSFAC - 101000138 101000151 3.0E-06 TATTTTATTTAAGA 14
V_BHLHB2_04_M02845 TRANSFAC - 101005521 101005543 0.0E+00 CGTTCCTCCACGTGTAGAGCAGC 23
V_BHLHB2_04_M02845 TRANSFAC + 101005522 101005544 1.0E-06 CTGCTCTACACGTGGAGGAACGA 23
V_HOXB5_01_M01319 TRANSFAC - 101001298 101001313 4.0E-06 AAGTTAATGAACTTAC 16
V_HOXB5_01_M01319 TRANSFAC + 101001300 101001315 2.0E-06 AAGTTCATTAACTTAA 16
V_HOX13_02_M01452 TRANSFAC - 101001298 101001313 5.0E-06 AAGTTAATGAACTTAC 16
V_HOX13_02_M01452 TRANSFAC + 101001300 101001315 1.0E-06 AAGTTCATTAACTTAA 16
V_NF1_Q6_M00193 TRANSFAC - 101008052 101008069 2.0E-06 CATTGGCATGGAGCCAGT 18
V_OCT4_01_M01125 TRANSFAC - 101001816 101001830 1.0E-06 TTTACTGATGTAAAT 15
V_HOXC8_01_M01321 TRANSFAC - 101001300 101001315 8.0E-06 TTAAGTTAATGAACTT 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL