Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SETD4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 54093 SET domain containing 4 chr21 - 37432111 - 37437816 37432611 Transcription Factor Binding Sites   Download all TFBS in the SETD4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 37429643 37429652 2.0E-06 ACAATAAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 37429643 37429652 2.0E-06 ACAATAAAAA 10 ELF4_ETS_full_monomeric_12_1 SELEX + 37432621 37432632 3.0E-06 GACCCGGAAGTC 12 Klf4_MA0039.2 JASPAR - 37433241 37433250 5.0E-06 TGGGTGGGGC 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 37429642 37429651 8.0E-06 TACAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 37429643 37429651 7.0E-06 ACAATAAAA 9 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 37429642 37429652 5.0E-06 TACAATAAAAA 11 SP1_MA0079.2 JASPAR + 37432307 37432316 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 37433132 37433141 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 37433128 37433144 6.0E-06 CAATCCCCGCCCCCATT 17 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 37429643 37429652 2.0E-06 ACAATAAAAA 10 MAX_MA0058.1 JASPAR + 37432265 37432274 4.0E-06 GACCACGTGA 10 EHF_ETS_full_monomeric_12_1 SELEX + 37432621 37432632 6.0E-06 GACCCGGAAGTC 12 ELF5_ETS_full_monomeric_11_1 SELEX + 37432622 37432632 8.0E-06 ACCCGGAAGTC 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 37429643 37429652 4.0E-06 ACAATAAAAA 10 ELF3_ETS_DBD_monomeric_12_1 SELEX + 37432621 37432632 5.0E-06 GACCCGGAAGTC 12 ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 37433258 37433274 5.0E-06 CATAGCCCATAATCAAA 17 CPEB1_RRM_full_monomeric_8_1 SELEX + 37429645 37429652 4.0E-06 AATAAAAA 8 ETV6_ETS_full_dimeric_15_1 SELEX + 37431910 37431924 9.0E-06 CAGGAGGCGGAAGCT 15 NRF1_NRF_full_dimeric_12_1 SELEX + 37432863 37432874 0.0E+00 CGCGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 37432863 37432874 1.0E-06 TGCGCATGCGCG 12 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 37429643 37429651 6.0E-06 ACAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 37429643 37429651 6.0E-06 ACAATAAAA 9 POU4F1_POU_DBD_monomeric_14_1 SELEX + 37433189 37433202 9.0E-06 CTAAATAATATATC 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 37429642 37429652 6.0E-06 TACAATAAAAA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 37429643 37429652 6.0E-06 ACAATAAAAA 10 V_DMRT4_01_M01149 TRANSFAC + 37429637 37429649 4.0E-06 AAAGTTACAATAA 13 V_FOXP1_01_M00987 TRANSFAC - 37433186 37433205 8.0E-06 TTAGATATATTATTTAGAAT 20 V_DEC2_Q2_M01843 TRANSFAC - 37432267 37432276 9.0E-06 CTTCACGTGG 10 V_EVI1_04_M00081 TRANSFAC + 37433194 37433208 4.0E-06 TAATATATCTAAATA 15 V_BCL6_01_M01183 TRANSFAC - 37433183 37433198 9.0E-06 TATTATTTAGAATTTT 16 V_BCL6_01_M01183 TRANSFAC - 37433193 37433208 7.0E-06 TATTTAGATATATTAT 16 V_IK_Q5_M01169 TRANSFAC + 37429698 37429707 3.0E-06 TTTGGGAGGC 10 V_ZFP740_03_M02834 TRANSFAC + 37433245 37433260 2.0E-06 CACCCACCCCCACTTT 16 V_CEBP_01_M00159 TRANSFAC - 37432704 37432716 9.0E-06 TGTTTGGTATTTC 13 V_AP2_Q6_01_M00915 TRANSFAC + 37432407 37432419 9.0E-06 CGGGCCTCAGGCT 13 V_SP1_03_M02281 TRANSFAC + 37432307 37432316 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 37433132 37433141 7.0E-06 CCCCGCCCCC 10 V_STAT6_01_M00494 TRANSFAC - 37432702 37432709 7.0E-06 TATTTCCA 8 V_AP2_Q6_M00189 TRANSFAC + 37432978 37432989 4.0E-06 AACCCGCAGGCG 12 V_GKLF_02_M01588 TRANSFAC + 37433241 37433252 3.0E-06 GCCCCACCCACC 12 V_SP1_02_M01303 TRANSFAC - 37432305 37432315 8.0E-06 GGGGCGGGGAC 11 V_HOXD13_01_M01404 TRANSFAC + 37429640 37429655 6.0E-06 GTTACAATAAAAACAC 16 V_LYF1_01_M00141 TRANSFAC + 37429698 37429706 9.0E-06 TTTGGGAGG 9 V_LDSPOLYA_B_M00317 TRANSFAC - 37429645 37429660 3.0E-06 ATACTGTGTTTTTATT 16 V_STAT4_Q4_M01666 TRANSFAC + 37429641 37429654 1.0E-06 TTACAATAAAAACA 14 V_NRSE_B_M00325 TRANSFAC + 37432421 37432441 3.0E-06 CTCAGCTTTACGCAGCGCGCC 21 V_ELF4_04_M02850 TRANSFAC + 37429640 37429656 3.0E-06 GTTACAATAAAAACACA 17 V_SOX7_03_M02807 TRANSFAC + 37433185 37433206 5.0E-06 AATTCTAAATAATATATCTAAA 22 V_NFAT_Q6_M00302 TRANSFAC + 37433177 37433188 1.0E-06 CACAGGAAAATT 12 V_DOBOX4_01_M01359 TRANSFAC + 37433199 37433215 8.0E-06 TATCTAAATACCCCTTC 17 V_KROX_Q6_M00982 TRANSFAC + 37433133 37433146 4.0E-06 CCCGCCCCCATTCC 14 V_STAT5A_02_M00460 TRANSFAC + 37433273 37433296 7.0E-06 TGCCTAGTAACTTGATTCCAAAGA 24 V_GADP_01_M01258 TRANSFAC - 37432621 37432632 9.0E-06 GACTTCCGGGTC 12 V_OCT1_04_M00138 TRANSFAC + 37433178 37433200 1.0E-06 ACAGGAAAATTCTAAATAATATA 23 V_HBP1_03_M02762 TRANSFAC + 37432552 37432567 3.0E-06 CTGATGAATGAAAGAC 16 V_RREB1_01_M00257 TRANSFAC + 37433242 37433255 4.0E-06 CCCCACCCACCCCC 14 V_HIC1_02_M01072 TRANSFAC - 37432601 37432615 2.0E-06 TCCAGTTGCCCGGGT 15 V_IK3_01_M00088 TRANSFAC - 37429685 37429697 7.0E-06 TGCTGGGAATACA 13 V_SP4_Q5_M01273 TRANSFAC + 37432306 37432316 9.0E-06 TCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 37433131 37433141 9.0E-06 TCCCCGCCCCC 11 V_FOXL1_02_M02857 TRANSFAC + 37429638 37429653 4.0E-06 AAGTTACAATAAAAAC 16 V_FOXL1_02_M02857 TRANSFAC + 37433185 37433200 1.0E-06 AATTCTAAATAATATA 16 V_ZFP206_01_M01742 TRANSFAC + 37432863 37432873 2.0E-06 CGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 37432864 37432874 0.0E+00 TGCGCATGCGC 11 V_LMX1B_01_M01363 TRANSFAC + 37433184 37433200 5.0E-06 AAATTCTAAATAATATA 17 V_LMX1B_01_M01363 TRANSFAC - 37433185 37433201 8.0E-06 ATATATTATTTAGAATT 17 V_NRF1_Q6_M00652 TRANSFAC - 37432863 37432872 4.0E-06 CGCATGCGCG 10 V_NRF1_Q6_M00652 TRANSFAC + 37432865 37432874 2.0E-06 CGCATGCGCA 10 V_ZFP281_01_M01597 TRANSFAC - 37432307 37432317 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 37433132 37433142 6.0E-06 TGGGGGCGGGG 11 V_CEBPB_Q6_M01896 TRANSFAC + 37432798 37432807 7.0E-06 TTAAGCAATC 10 V_SOX8_03_M02808 TRANSFAC - 37429637 37429653 6.0E-06 GTTTTTATTGTAACTTT 17 V_SOX8_03_M02808 TRANSFAC - 37433187 37433203 2.0E-06 AGATATATTATTTAGAA 17 V_SP1_Q2_01_M00933 TRANSFAC + 37432307 37432316 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 37433132 37433141 4.0E-06 CCCCGCCCCC 10 V_COUP_DR1_Q6_M00765 TRANSFAC - 37432954 37432966 3.0E-06 TGACCCCTGACTC 13 V_PAX4_04_M00380 TRANSFAC + 37433183 37433212 7.0E-06 AAAATTCTAAATAATATATCTAAATACCCC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.