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CNTN5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 53942 contactin 5 chr11 + 98886705 - 98892205 98891705 Transcription Factor Binding Sites   Download all TFBS in the CNTN5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 98886772 98886790 0.0E+00 CTACCACTAGATGGCACTC 19 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 98886815 98886827 9.0E-06 GTGAACAAAAAAA 13 VSX1_homeodomain_full_monomeric_11_1 SELEX + 98886757 98886767 5.0E-06 TGCTAATTAGA 11 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 98886760 98886777 7.0E-06 GCACTCATGCTCTAATTA 18 ALX3_homeodomain_full_monomeric_10_1 SELEX - 98886758 98886767 5.0E-06 TCTAATTAGC 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 98887868 98887884 1.0E-06 GTAAACAACGCTAAAGA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 98887940 98887956 1.0E-06 GAAAGCAGAAGTAAACA 17 HSF1_HSF_full_trimeric_13_1 SELEX - 98891162 98891174 7.0E-06 TTGCAGAATTTTC 13 HNF1B_MA0153.1 JASPAR - 98891353 98891364 5.0E-06 TCCGTATTTAAC 12 Alx1_homeodomain_DBD_monomeric_10_1 SELEX - 98886758 98886767 4.0E-06 TCTAATTAGC 10 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 98887877 98887884 7.0E-06 GTAAACAA 8 SPIB_ETS_DBD_monomeric_14_1 SELEX - 98887944 98887957 4.0E-06 TGAAAGCAGAAGTA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 98886815 98886828 4.0E-06 GTGAACAAAAAAAA 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 98887959 98887972 8.0E-06 ATCACAGCTGTTTT 14 CTCF_C2H2_full_monomeric_17_1 SELEX + 98886773 98886789 0.0E+00 AGTGCCATCTAGTGGTA 17 PAX4_PAX_full_monomeric_8_1 SELEX + 98886759 98886766 7.0E-06 CTAATTAG 8 PAX4_PAX_full_monomeric_8_1 SELEX - 98886759 98886766 7.0E-06 CTAATTAG 8 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 98886760 98886777 7.0E-06 GCACTCATGCTCTAATTA 18 POU6F2_POU_full_monomeric_10_1 SELEX + 98886758 98886767 0.0E+00 GCTAATTAGA 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 98887961 98887970 9.0E-06 CACAGCTGTT 10 LBX2_homeodomain_DBD_monomeric_10_1 SELEX + 98886758 98886767 1.0E-05 GCTAATTAGA 10 Lhx8_homeodomain_DBD_monomeric_8_1 SELEX + 98886759 98886766 7.0E-06 CTAATTAG 8 Lhx8_homeodomain_DBD_monomeric_8_1 SELEX - 98886759 98886766 7.0E-06 CTAATTAG 8 SPI1_ETS_full_monomeric_14_1 SELEX - 98887944 98887957 3.0E-06 TGAAAGCAGAAGTA 14 FOXB1_forkhead_full_monomeric_9_1 SELEX - 98887877 98887885 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 98887877 98887884 7.0E-06 GTAAACAA 8 EN1_homeodomain_full_monomeric_8_1 SELEX + 98886759 98886766 7.0E-06 CTAATTAG 8 EN1_homeodomain_full_monomeric_8_1 SELEX - 98886759 98886766 7.0E-06 CTAATTAG 8 MSC_bHLH_full_dimeric_10_1 SELEX + 98887961 98887970 9.0E-06 AACAGCTGTG 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 98886815 98886827 2.0E-06 GTGAACAAAAAAA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 98886815 98886828 7.0E-06 GTGAACAAAAAAAA 14 V_FOXP1_01_M00987 TRANSFAC - 98891704 98891723 3.0E-06 TTGGTTATATTGGGAAGTAG 20 V_HSF2_01_M00147 TRANSFAC - 98891161 98891170 5.0E-06 AGAATTTTCT 10 V_STAT5A_Q6_M01890 TRANSFAC + 98887988 98888000 4.0E-06 CATCTTCTAAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 98887992 98888004 3.0E-06 GAGTTTCTTAGAA 13 V_TCF3_01_M01594 TRANSFAC + 98891335 98891347 8.0E-06 GCTTTGTAATCTA 13 V_AR_02_M00953 TRANSFAC + 98892072 98892098 7.0E-06 ATTTTTGACACACTCTGTTCTGCAAAG 27 V_FOXA2_04_M02749 TRANSFAC - 98887935 98887951 3.0E-06 CAGAAGTAAACATATCT 17 V_LBX2_01_M01401 TRANSFAC - 98886754 98886770 7.0E-06 TGCTCTAATTAGCAATG 17 V_MAFB_03_M02879 TRANSFAC - 98891163 98891177 4.0E-06 ACTTTGCAGAATTTT 15 V_GBX2_01_M01382 TRANSFAC - 98886754 98886770 1.0E-06 TGCTCTAATTAGCAATG 17 V_GBX2_01_M01382 TRANSFAC + 98886755 98886771 9.0E-06 ATTGCTAATTAGAGCAT 17 V_AP4_Q6_M00176 TRANSFAC - 98887961 98887970 8.0E-06 CACAGCTGTT 10 V_CART1_02_M01362 TRANSFAC - 98886754 98886770 7.0E-06 TGCTCTAATTAGCAATG 17 V_STAT5B_01_M00459 TRANSFAC - 98887989 98888003 7.0E-06 AGTTTCTTAGAAGAT 15 V_PU1_Q4_M01172 TRANSFAC + 98887938 98887956 3.0E-06 TATGTTTACTTCTGCTTTC 19 V_EVX1_01_M01475 TRANSFAC - 98886754 98886770 3.0E-06 TGCTCTAATTAGCAATG 17 V_ALX4_02_M01417 TRANSFAC - 98886754 98886770 7.0E-06 TGCTCTAATTAGCAATG 17 V_TCFAP2E_04_M02926 TRANSFAC + 98886816 98886829 2.0E-06 TGAACAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 98886817 98886830 7.0E-06 GAACAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 98886818 98886831 1.0E-06 AACAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC + 98886819 98886832 9.0E-06 ACAAAAAAAAAATA 14 V_PAX7_01_M01339 TRANSFAC - 98886754 98886770 5.0E-06 TGCTCTAATTAGCAATG 17 V_LHX8_01_M01440 TRANSFAC - 98886754 98886770 2.0E-06 TGCTCTAATTAGCAATG 17 V_AR_03_M00956 TRANSFAC + 98887850 98887876 1.0E-06 CCACAAAGTAGACTATGTTCTTTAGCG 27 V_AR_03_M00956 TRANSFAC + 98892072 98892098 9.0E-06 ATTTTTGACACACTCTGTTCTGCAAAG 27 V_STAT4_Q4_M01666 TRANSFAC + 98887992 98888005 7.0E-06 TTCTAAGAAACTCA 14 V_EVX2_01_M01386 TRANSFAC + 98886754 98886770 4.0E-06 CATTGCTAATTAGAGCA 17 V_LHX61_01_M01314 TRANSFAC + 98886754 98886770 3.0E-06 CATTGCTAATTAGAGCA 17 V_ELF4_04_M02850 TRANSFAC + 98886816 98886832 7.0E-06 TGAACAAAAAAAAAATA 17 V_ELF4_04_M02850 TRANSFAC + 98886817 98886833 3.0E-06 GAACAAAAAAAAAATAG 17 V_SOX7_03_M02807 TRANSFAC + 98886811 98886832 3.0E-06 ATTGGTGAACAAAAAAAAAATA 22 V_PR_01_M00954 TRANSFAC + 98886829 98886855 4.0E-06 AATAGGTGGTGAAAATGTTCTGCTTCT 27 V_PR_01_M00954 TRANSFAC + 98887850 98887876 8.0E-06 CCACAAAGTAGACTATGTTCTTTAGCG 27 V_ZFP105_03_M02827 TRANSFAC + 98886818 98886832 0.0E+00 AACAAAAAAAAAATA 15 V_ZFP105_03_M02827 TRANSFAC + 98886819 98886833 2.0E-06 ACAAAAAAAAAATAG 15 V_XFD3_01_M00269 TRANSFAC + 98886812 98886825 1.0E-05 TTGGTGAACAAAAA 14 V_HSF1_01_M00146 TRANSFAC - 98891161 98891170 7.0E-06 AGAATTTTCT 10 V_HNF1B_04_M02266 TRANSFAC - 98891353 98891364 5.0E-06 TCCGTATTTAAC 12 V_IRF3_Q3_M01279 TRANSFAC - 98891173 98891185 9.0E-06 ACTTTTTCACTTT 13 V_LHX2_01_M01325 TRANSFAC - 98886754 98886770 8.0E-06 TGCTCTAATTAGCAATG 17 V_PAX4_05_M01385 TRANSFAC - 98886754 98886770 3.0E-06 TGCTCTAATTAGCAATG 17 V_PAX4_05_M01385 TRANSFAC + 98886755 98886771 7.0E-06 ATTGCTAATTAGAGCAT 17 V_GSH2_01_M01326 TRANSFAC + 98886756 98886771 5.0E-06 TTGCTAATTAGAGCAT 16 V_OCT1_08_M01354 TRANSFAC - 98886756 98886771 8.0E-06 ATGCTCTAATTAGCAA 16 V_GR_01_M00955 TRANSFAC + 98887850 98887876 3.0E-06 CCACAAAGTAGACTATGTTCTTTAGCG 27 V_AP4_Q5_M00175 TRANSFAC - 98887961 98887970 8.0E-06 CACAGCTGTT 10 V_SPIB_01_M01204 TRANSFAC + 98886718 98886734 3.0E-06 AAAAATCGGAACATCCT 17 V_RREB1_01_M00257 TRANSFAC + 98891671 98891684 1.0E-06 CCCCAAACACACCA 14 V_STAT4_Q5_M02117 TRANSFAC + 98887992 98888001 1.0E-06 TTCTAAGAAA 10 V_CTCF_02_M01259 TRANSFAC - 98886774 98886793 0.0E+00 TGTCTACCACTAGATGGCAC 20 V_SOX11_03_M02795 TRANSFAC + 98886813 98886829 2.0E-06 TGGTGAACAAAAAAAAA 17 V_EMX2_01_M01461 TRANSFAC - 98886754 98886770 6.0E-06 TGCTCTAATTAGCAATG 17 V_CTCF_01_M01200 TRANSFAC - 98886772 98886791 0.0E+00 TCTACCACTAGATGGCACTC 20 V_HNF4A_02_M02868 TRANSFAC + 98891177 98891192 0.0E+00 TGAAAAAGTCCACTCT 16 V_SP4_Q5_M01273 TRANSFAC - 98891579 98891589 7.0E-06 GCCCCTCCCCG 11 V_EN2_01_M01455 TRANSFAC - 98886754 98886770 7.0E-06 TGCTCTAATTAGCAATG 17 V_ELF1_Q6_M00746 TRANSFAC + 98891651 98891662 1.0E-05 ATTGGAGGAAAA 12 V_SOX15_03_M02799 TRANSFAC + 98886813 98886829 4.0E-06 TGGTGAACAAAAAAAAA 17 V_MTF1_06_M02882 TRANSFAC + 98886819 98886832 7.0E-06 ACAAAAAAAAAATA 14 V_ISX_01_M01331 TRANSFAC + 98886755 98886770 3.0E-06 ATTGCTAATTAGAGCA 16 V_FAC1_01_M00456 TRANSFAC + 98886817 98886830 3.0E-06 GAACAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 98886819 98886832 4.0E-06 ACAAAAAAAAAATA 14 V_MSX2_01_M01393 TRANSFAC - 98886755 98886771 6.0E-06 ATGCTCTAATTAGCAAT 17 V_ALX4_03_M02944 TRANSFAC - 98886754 98886770 7.0E-06 TGCTCTAATTAGCAATG 17 V_LHX61_02_M01422 TRANSFAC - 98886754 98886770 2.0E-06 TGCTCTAATTAGCAATG 17 V_LHX61_02_M01422 TRANSFAC + 98886755 98886771 8.0E-06 ATTGCTAATTAGAGCAT 17 V_TBX5_Q5_M01044 TRANSFAC - 98891237 98891246 9.0E-06 CTCACACCTC 10 V_CHX10_01_M00437 TRANSFAC - 98886755 98886768 5.0E-06 CTCTAATTAGCAAT 14 V_CHX10_01_M00437 TRANSFAC + 98886757 98886770 1.0E-06 TGCTAATTAGAGCA 14 V_IRF1_Q6_01_M01881 TRANSFAC - 98891171 98891184 4.0E-06 CTTTTTCACTTTGC 14 V_ESX1_01_M01474 TRANSFAC + 98886754 98886770 3.0E-06 CATTGCTAATTAGAGCA 17 V_SRF_06_M02916 TRANSFAC + 98886814 98886830 2.0E-06 GGTGAACAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 98886815 98886831 1.0E-06 GTGAACAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 98886816 98886832 3.0E-06 TGAACAAAAAAAAAATA 17 V_SRF_06_M02916 TRANSFAC + 98886817 98886833 0.0E+00 GAACAAAAAAAAAATAG 17 V_SRF_06_M02916 TRANSFAC + 98886819 98886835 4.0E-06 ACAAAAAAAAAATAGGT 17 V_HSF2_02_M01244 TRANSFAC + 98891162 98891174 7.0E-06 GAAAATTCTGCAA 13 V_HOXB3_01_M01330 TRANSFAC - 98886754 98886770 3.0E-06 TGCTCTAATTAGCAATG 17 V_NKX12_01_M01427 TRANSFAC + 98886754 98886770 6.0E-06 CATTGCTAATTAGAGCA 17 V_HNF3B_Q6_M02014 TRANSFAC + 98887877 98887885 2.0E-06 TTGTTTACT 9 V_S8_02_M01376 TRANSFAC - 98886754 98886770 3.0E-06 TGCTCTAATTAGCAATG 17 V_S8_02_M01376 TRANSFAC + 98886755 98886771 3.0E-06 ATTGCTAATTAGAGCAT 17 V_FREAC4_01_M00292 TRANSFAC - 98887874 98887889 5.0E-06 CTTCAGTAAACAACGC 16 V_LHX4_01_M01421 TRANSFAC - 98886754 98886770 6.0E-06 TGCTCTAATTAGCAATG 17 V_UF1H3BETA_Q6_M01068 TRANSFAC + 98891576 98891589 2.0E-06 GGCCGGGGAGGGGC 14 V_MAFK_04_M02880 TRANSFAC + 98892127 98892141 8.0E-06 GTAAAAACTGTAAGA 15 V_TAACC_B_M00331 TRANSFAC + 98886786 98886808 8.0E-06 GGTAGACATGGCTAACTACAGGC 23 V_TCF3_05_M02920 TRANSFAC + 98886817 98886831 2.0E-06 GAACAAAAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC + 98886818 98886832 3.0E-06 AACAAAAAAAAAATA 15 V_FOXK1_03_M02752 TRANSFAC - 98887935 98887951 8.0E-06 CAGAAGTAAACATATCT 17 V_GBX1_01_M01371 TRANSFAC + 98886754 98886770 4.0E-06 CATTGCTAATTAGAGCA 17 V_NANOG_02_M01247 TRANSFAC + 98886811 98886830 1.0E-06 ATTGGTGAACAAAAAAAAAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.