Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PRKAG3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 53632 protein kinase, AMP-activated, gamma 3 non-catalytic subunit chr2 - 219696012 - 219701512 219696512 Transcription Factor Binding Sites   Download all TFBS in the PRKAG3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX - 219697666 219697676 9.0E-06 TTGGTGTGAAG 11 Egr1_MA0162.1 JASPAR - 219696377 219696387 7.0E-06 TGTGTGGGCGT 11 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 219699658 219699667 5.0E-06 GTAATAAATA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 219699658 219699667 9.0E-06 GTAATAAATA 10 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 219698174 219698183 1.0E-05 CTTAATTATC 10 Dlx1_homeodomain_DBD_monomeric_8_1 SELEX + 219698175 219698182 4.0E-06 ATAATTAA 8 Tp53_p53l_DBD_dimeric_18_2 SELEX + 219696307 219696324 6.0E-06 CATATGCCCAAACATGCA 18 EWSR1-FLI1_MA0149.1 JASPAR - 219697390 219697407 4.0E-06 GGAAGGAGGAGAGAAAGG 18 IRF7_IRF_DBD_trimeric_17_1 SELEX - 219698223 219698239 5.0E-06 AAAAAAAAAATCCACTT 17 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 219696375 219696390 9.0E-06 ACACGCCCACACACAC 16 SOX8_HMG_full_dimeric_13_1 SELEX + 219697460 219697472 4.0E-06 GTGAATTTCTGTC 13 ESR1_MA0112.2 JASPAR + 219696562 219696581 1.0E-06 GGCCCCGGGCACCCTGCCCT 20 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 219699657 219699667 8.0E-06 GGTAATAAATA 11 EGR2_C2H2_full_monomeric_15_1 SELEX + 219696375 219696389 7.0E-06 ACACGCCCACACACA 15 SP1_MA0079.2 JASPAR - 219695114 219695123 9.0E-06 CCCCTCCTCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 219698188 219698197 2.0E-06 AGCAGCTGCT 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 219698188 219698197 2.0E-06 AGCAGCTGCT 10 DLX6_homeodomain_DBD_monomeric_8_1 SELEX + 219698175 219698182 9.0E-06 ATAATTAA 8 VAX1_homeodomain_DBD_monomeric_8_1 SELEX - 219698175 219698182 9.0E-06 TTAATTAT 8 DLX3_homeodomain_DBD_monomeric_8_1 SELEX + 219698175 219698182 9.0E-06 ATAATTAA 8 NRL_bZIP_DBD_monomeric_11_1 SELEX + 219698107 219698117 2.0E-06 AATGTGCTGAC 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 219696290 219696304 2.0E-06 CACACACACTCACAA 15 EGR4_C2H2_DBD_monomeric_16_2 SELEX + 219696375 219696390 3.0E-06 ACACGCCCACACACAC 16 Foxd3_MA0041.1 JASPAR + 219698228 219698239 7.0E-06 GATTTTTTTTTT 12 Stat3_MA0144.1 JASPAR + 219698134 219698143 7.0E-06 TGCCAGGAAA 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 219696948 219696962 5.0E-06 AGAAAGGGCAAGTTG 15 Myf_MA0055.1 JASPAR + 219698187 219698198 0.0E+00 CAGCAGCTGCTG 12 Myf_MA0055.1 JASPAR - 219698187 219698198 0.0E+00 CAGCAGCTGCTG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX + 219697436 219697452 2.0E-06 GAGTGGACACTCAACAA 17 MAFK_bZIP_full_monomeric_12_1 SELEX + 219698106 219698117 1.0E-06 AAATGTGCTGAC 12 TP53_MA0106.1 JASPAR - 219696308 219696327 7.0E-06 ATGTGCATGTTTGGGCATAT 20 ELF5_MA0136.1 JASPAR + 219697660 219697668 5.0E-06 AATTTCCTT 9 NHLH1_bHLH_full_dimeric_10_1 SELEX + 219698188 219698197 7.0E-06 AGCAGCTGCT 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 219698188 219698197 7.0E-06 AGCAGCTGCT 10 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 219699657 219699667 3.0E-06 GGTAATAAATA 11 DLX5_homeodomain_FL_monomeric_8_1 SELEX + 219698175 219698182 8.0E-06 ATAATTAA 8 V_MEQ_01_M02049 TRANSFAC - 219697485 219697493 4.0E-06 AAAACACAT 9 V_FOXP1_01_M00987 TRANSFAC - 219696253 219696272 6.0E-06 GTGTTTGGATGTGTGTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 219696373 219696392 6.0E-06 ATGTGTGTGTGGGCGTGTGT 20 V_E2A_Q6_01_M02088 TRANSFAC - 219695080 219695092 1.0E-06 GGCCAGCTGCTGA 13 V_AML_Q6_M00769 TRANSFAC - 219699588 219699602 6.0E-06 AGGCTTGTGGTCAGA 15 V_EBF_Q6_M00977 TRANSFAC + 219696441 219696451 1.0E-05 CTCCCCTGGGA 11 V_EVI1_05_M00082 TRANSFAC + 219698168 219698178 6.0E-06 AGATTTGATAA 11 V_TCFE2A_04_M02927 TRANSFAC + 219697028 219697044 7.0E-06 ATGTCCAGATGTCCAGA 17 V_MAFK_03_M02776 TRANSFAC + 219698105 219698119 7.0E-06 CAAATGTGCTGACCA 15 V_ESR1_01_M02261 TRANSFAC + 219696562 219696581 1.0E-06 GGCCCCGGGCACCCTGCCCT 20 V_HMGIY_Q3_M01010 TRANSFAC + 219698224 219698238 0.0E+00 AGTGGATTTTTTTTT 15 V_FOXD3_01_M00130 TRANSFAC + 219698228 219698239 8.0E-06 GATTTTTTTTTT 12 V_MAFB_05_M02775 TRANSFAC + 219698106 219698122 0.0E+00 AAATGTGCTGACCAAGA 17 V_MAFB_03_M02879 TRANSFAC - 219697679 219697693 4.0E-06 CATTTGAAAAAACAT 15 V_HOXA4_01_M01370 TRANSFAC + 219698170 219698186 5.0E-06 ATTTGATAATTAAGATC 17 V_HOXC4_01_M01369 TRANSFAC - 219698170 219698186 9.0E-06 GATCTTAATTATCAAAT 17 V_EAR2_Q2_M01728 TRANSFAC - 219697637 219697650 9.0E-06 TGATCTCTGTCCTC 14 V_SP1_03_M02281 TRANSFAC - 219695114 219695123 9.0E-06 CCCCTCCTCC 10 V_HOXA2_01_M01402 TRANSFAC - 219698170 219698185 8.0E-06 ATCTTAATTATCAAAT 16 V_HOXC6_01_M01406 TRANSFAC - 219698170 219698186 3.0E-06 GATCTTAATTATCAAAT 17 V_EGR1_02_M01972 TRANSFAC - 219696377 219696387 4.0E-06 TGTGTGGGCGT 11 V_NERF_Q2_M00531 TRANSFAC + 219698134 219698151 8.0E-06 TGCCAGGAAAGGGCTTAG 18 V_AP4_Q6_02_M01860 TRANSFAC - 219694952 219694964 7.0E-06 TCAGCTGCAGGCT 13 V_COUPTF_Q6_M01036 TRANSFAC - 219697633 219697655 7.0E-06 TACACTGATCTCTGTCCTCTGAG 23 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 219695032 219695047 9.0E-06 TGAGCCAAGGGTGTGG 16 V_GM497_04_M02864 TRANSFAC + 219696287 219696302 2.0E-06 AACCACACACACTCAC 16 V_GM497_04_M02864 TRANSFAC + 219696367 219696382 4.0E-06 GAAGACACACACGCCC 16 V_TCFAP2E_04_M02926 TRANSFAC - 219698230 219698243 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 219698232 219698245 2.0E-06 GTCTCAAAAAAAAA 14 V_NKX62_Q2_M00489 TRANSFAC + 219699658 219699669 0.0E+00 GTAATAAATACT 12 V_RPC155_01_M01798 TRANSFAC - 219698271 219698286 3.0E-06 CCAGGAGTTTGAGACT 16 V_ELF4_04_M02850 TRANSFAC - 219698227 219698243 2.0E-06 CTCAAAAAAAAAAATCC 17 V_ELF4_04_M02850 TRANSFAC - 219698228 219698244 0.0E+00 TCTCAAAAAAAAAAATC 17 V_ELF4_04_M02850 TRANSFAC - 219698229 219698245 1.0E-06 GTCTCAAAAAAAAAAAT 17 V_BACH1_01_M00495 TRANSFAC + 219698343 219698357 6.0E-06 AGCATGAGTCAGTGT 15 V_COMP1_01_M00057 TRANSFAC - 219695160 219695183 0.0E+00 TGAGATGAATGGCGACAGCAGATG 24 V_HOXA6_01_M01392 TRANSFAC - 219698170 219698185 4.0E-06 ATCTTAATTATCAAAT 16 V_MYF_01_M01302 TRANSFAC + 219698187 219698198 0.0E+00 CAGCAGCTGCTG 12 V_MYF_01_M01302 TRANSFAC - 219698187 219698198 0.0E+00 CAGCAGCTGCTG 12 V_ZFP105_03_M02827 TRANSFAC - 219698229 219698243 2.0E-06 CTCAAAAAAAAAAAT 15 V_ZFP410_03_M02832 TRANSFAC - 219697412 219697428 8.0E-06 AGGGCTGGGATGGAAGA 17 V_HIC1_03_M01073 TRANSFAC - 219696561 219696578 7.0E-06 GCAGGGTGCCCGGGGCCG 18 V_ZBP89_Q4_M01816 TRANSFAC - 219695110 219695119 2.0E-06 TCCTCCCCCA 10 V_P53_03_M01651 TRANSFAC + 219696306 219696325 9.0E-06 ACATATGCCCAAACATGCAC 20 V_IRX4_01_M01410 TRANSFAC - 219697477 219697493 3.0E-06 AAAACACATGTAATAAA 17 V_ARID3A_02_M02839 TRANSFAC - 219698168 219698182 6.0E-06 TTAATTATCAAATCT 15 V_HOXB6_01_M01460 TRANSFAC + 219698170 219698185 8.0E-06 ATTTGATAATTAAGAT 16 V_IK1_01_M00086 TRANSFAC - 219696140 219696152 6.0E-06 GTTTGGGAATGTA 13 V_IK1_01_M00086 TRANSFAC + 219697341 219697353 3.0E-06 GATTGGGAATGCT 13 V_CDX2_01_M01449 TRANSFAC + 219699654 219699669 4.0E-06 TTGGGTAATAAATACT 16 V_MAZ_Q6_01_M02023 TRANSFAC + 219695111 219695124 1.0E-06 GGGGGAGGAGGGGA 14 V_GSH2_01_M01326 TRANSFAC - 219698170 219698185 4.0E-06 ATCTTAATTATCAAAT 16 V_ASCL2_03_M02737 TRANSFAC - 219698184 219698200 2.0E-06 CCCAGCAGCTGCTGGAT 17 V_ASCL2_03_M02737 TRANSFAC + 219698185 219698201 2.0E-06 TCCAGCAGCTGCTGGGT 17 V_CDX1_01_M01373 TRANSFAC + 219699654 219699669 3.0E-06 TTGGGTAATAAATACT 16 V_OCT1_08_M01354 TRANSFAC + 219698170 219698185 0.0E+00 ATTTGATAATTAAGAT 16 V_IK2_01_M00087 TRANSFAC + 219697341 219697352 2.0E-06 GATTGGGAATGC 12 V_HOXC12_01_M01437 TRANSFAC + 219699654 219699670 5.0E-06 TTGGGTAATAAATACTC 17 V_ZIC3_05_M02941 TRANSFAC + 219698026 219698040 9.0E-06 CTTCCCAGCAGGAAA 15 V_ZIC3_05_M02941 TRANSFAC + 219698337 219698351 6.0E-06 GTGCTCAGCATGAGT 15 V_AP1_C_M00199 TRANSFAC + 219698346 219698354 3.0E-06 ATGAGTCAG 9 V_AP1_01_M00517 TRANSFAC + 219698344 219698356 6.0E-06 GCATGAGTCAGTG 13 V_HIC1_02_M01072 TRANSFAC - 219696564 219696578 3.0E-06 GCAGGGTGCCCGGGG 15 V_STAT3_03_M01595 TRANSFAC + 219698132 219698147 3.0E-06 ACTGCCAGGAAAGGGC 16 V_IRX3_01_M01318 TRANSFAC - 219697477 219697493 3.0E-06 AAAACACATGTAATAAA 17 V_IK3_01_M00088 TRANSFAC + 219697341 219697353 6.0E-06 GATTGGGAATGCT 13 V_OCT4_02_M01124 TRANSFAC + 219698213 219698227 3.0E-06 TTTCAGTTGCAAGTG 15 V_EGR2_01_M00246 TRANSFAC - 219696377 219696388 9.0E-06 GTGTGTGGGCGT 12 V_SRF_03_M01304 TRANSFAC + 219696868 219696880 8.0E-06 CACCAAAGAAGGG 13 V_AP1_Q2_01_M00924 TRANSFAC - 219698342 219698353 4.0E-06 TGACTCATGCTG 12 V_IRX5_01_M01472 TRANSFAC - 219697477 219697493 5.0E-06 AAAACACATGTAATAAA 17 V_LIM1_01_M01418 TRANSFAC - 219698170 219698186 9.0E-06 GATCTTAATTATCAAAT 17 V_HOXB4_01_M01424 TRANSFAC - 219698170 219698186 9.0E-06 GATCTTAATTATCAAAT 17 V_TAL1BETAITF2_01_M00070 TRANSFAC - 219697600 219697615 7.0E-06 GTGAGCAGATGTCCTT 16 V_TFIII_Q6_M00706 TRANSFAC + 219696621 219696629 6.0E-06 AGAGGGAGG 9 V_IRX3_02_M01485 TRANSFAC - 219697477 219697493 4.0E-06 AAAACACATGTAATAAA 17 V_FXR_IR1_Q6_M00767 TRANSFAC - 219695127 219695139 4.0E-06 GAGTTACTGTCCT 13 V_ZIC2_05_M02940 TRANSFAC + 219698026 219698040 0.0E+00 CTTCCCAGCAGGAAA 15 V_HAND1E47_01_M00222 TRANSFAC - 219696344 219696359 6.0E-06 TGTTTGGTCTGGATTT 16 V_NFYC_Q5_M02107 TRANSFAC - 219696597 219696610 1.0E-06 CACCCAATCAGAGA 14 V_NKX25_03_M01414 TRANSFAC - 219698217 219698232 7.0E-06 AAATCCACTTGCAACT 16 V_HOXB8_01_M01451 TRANSFAC + 219699654 219699669 9.0E-06 TTGGGTAATAAATACT 16 V_LUN1_01_M00480 TRANSFAC - 219698302 219698318 7.0E-06 TCCCAGCTACTGAGATA 17 V_FPM315_01_M01587 TRANSFAC + 219695111 219695122 1.0E-06 GGGGGAGGAGGG 12 V_T3RBETA_Q6_01_M02119 TRANSFAC - 219696416 219696432 4.0E-06 GGGGCAGCTGAGGCCAG 17 V_ZFP281_01_M01597 TRANSFAC + 219695110 219695120 9.0E-06 TGGGGGAGGAG 11 V_IRX2_01_M01405 TRANSFAC - 219697477 219697493 4.0E-06 AAAACACATGTAATAAA 17 V_SRF_02_M01257 TRANSFAC + 219696868 219696885 8.0E-06 CACCAAAGAAGGGAACAT 18 V_TCFAP2B_04_M02924 TRANSFAC - 219698039 219698053 7.0E-06 GTAGCCTCTGGCTTT 15 V_SRF_06_M02916 TRANSFAC - 219698225 219698241 4.0E-06 CAAAAAAAAAAATCCAC 17 V_SRF_06_M02916 TRANSFAC - 219698226 219698242 8.0E-06 TCAAAAAAAAAAATCCA 17 V_SRF_06_M02916 TRANSFAC - 219698227 219698243 0.0E+00 CTCAAAAAAAAAAATCC 17 V_SRF_06_M02916 TRANSFAC - 219698228 219698244 1.0E-06 TCTCAAAAAAAAAAATC 17 V_SRF_06_M02916 TRANSFAC - 219698229 219698245 2.0E-06 GTCTCAAAAAAAAAAAT 17 V_HIF2A_01_M01249 TRANSFAC - 219695149 219695158 6.0E-06 GAACGTGCTT 10 V_VAX1_01_M01397 TRANSFAC - 219698170 219698185 1.0E-05 ATCTTAATTATCAAAT 16 V_EWSR1FLI1_01_M02252 TRANSFAC - 219697390 219697407 4.0E-06 GGAAGGAGGAGAGAAAGG 18 V_VMAF_01_M00035 TRANSFAC + 219697347 219697365 3.0E-06 GAATGCTGACCCAGCTGCT 19 V_VMAF_01_M00035 TRANSFAC + 219698108 219698126 2.0E-06 ATGTGCTGACCAAGAACTT 19 V_YY1_01_M00059 TRANSFAC + 219695134 219695150 5.0E-06 TAACTCCATCTTCCAAA 17 V_NFE2_01_M00037 TRANSFAC - 219698346 219698356 8.0E-06 CACTGACTCAT 11 V_SOX15_04_M02903 TRANSFAC - 219696917 219696931 3.0E-06 TCTACTGAAATTAGA 15 V_ELF5_04_M02241 TRANSFAC + 219697660 219697668 5.0E-06 AATTTCCTT 9 V_NFYA_Q5_M02106 TRANSFAC - 219696597 219696610 4.0E-06 CACCCAATCAGAGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 219696621 219696633 6.0E-06 AGAGGGAGGGGCC 13 V_SOX5_04_M02910 TRANSFAC + 219698171 219698185 2.0E-06 TTTGATAATTAAGAT 15 V_IRXB3_01_M01377 TRANSFAC - 219697477 219697493 4.0E-06 AAAACACATGTAATAAA 17 V_ZID_01_M00085 TRANSFAC + 219698285 219698297 5.0E-06 GGGCTCAATGATC 13 V_TCF3_05_M02920 TRANSFAC - 219698230 219698244 4.0E-06 TCTCAAAAAAAAAAA 15 V_DEC_Q1_M00997 TRANSFAC - 219699647 219699659 9.0E-06 ACCCAACTGAAGC 13 V_AR_Q2_M00447 TRANSFAC - 219698120 219698134 1.0E-06 AGTGGAGTAAGTTCT 15 V_HOXB5_01_M01319 TRANSFAC - 219698170 219698185 1.0E-06 ATCTTAATTATCAAAT 16 V_PAX2_02_M00486 TRANSFAC - 219697474 219697482 2.0E-06 AATAAACTC 9 V_DMRT5_01_M01150 TRANSFAC + 219698237 219698251 2.0E-06 TTTTGAGACAGTGTC 15 V_ZIC1_05_M02939 TRANSFAC + 219698026 219698040 1.0E-06 CTTCCCAGCAGGAAA 15 V_HOX13_02_M01452 TRANSFAC - 219698170 219698185 7.0E-06 ATCTTAATTATCAAAT 16 V_HOXC9_01_M01416 TRANSFAC + 219699654 219699669 9.0E-06 TTGGGTAATAAATACT 16 V_HOXC8_01_M01321 TRANSFAC + 219698170 219698185 3.0E-06 ATTTGATAATTAAGAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.