Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PLP1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5354 proteolipid protein 1 chrX + 103026438 - 103032253 103031753 Transcription Factor Binding Sites   Download all TFBS in the PLP1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXC13_homeodomain_DBD_monomeric_11_1 SELEX - 103029107 103029117 1.0E-05 ACTCGTAAACA 11 RFX4_RFX_DBD_dimeric_16_1 SELEX + 103034203 103034218 1.0E-06 TGTTACCCTGGTAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 103034203 103034218 3.0E-06 GGTTACCAGGGTAACA 16 NFIX_NFI_full_dimeric_15_2 SELEX + 103034243 103034257 7.0E-06 GTGGCTGTTTGCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 103034243 103034257 6.0E-06 TTGGCAAACAGCCAC 15 Spz1_MA0111.1 JASPAR - 103034201 103034211 0.0E+00 AGGGTAACAGC 11 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 103034203 103034218 6.0E-06 TGTTACCCTGGTAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 103034203 103034218 1.0E-06 GGTTACCAGGGTAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 103034203 103034218 2.0E-06 TGTTACCCTGGTAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 103034203 103034218 3.0E-06 GGTTACCAGGGTAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 103034203 103034218 1.0E-06 TGTTACCCTGGTAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 103034203 103034218 1.0E-06 GGTTACCAGGGTAACA 16 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 103029107 103029117 1.0E-05 ACTCGTAAACA 11 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 103027784 103027798 8.0E-06 AATTAGTCAGTAACT 15 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 103027776 103027789 4.0E-06 GTAACTAGTCAACA 14 V_AP1_Q2_M00173 TRANSFAC + 103027788 103027798 6.0E-06 ACTGACTAATT 11 V_NF1A_Q6_M02103 TRANSFAC + 103034243 103034258 5.0E-06 GTGGCTGTTTGCCAAG 16 V_ZEC_01_M01081 TRANSFAC - 103027999 103028011 8.0E-06 CTTGGGAGGTTGT 13 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 103034281 103034296 5.0E-06 CAGTAAGTGGGTGTAG 16 V_HOXA13_03_M01430 TRANSFAC - 103029105 103029120 1.0E-06 AAAACTCGTAAACAGT 16 V_HOXC13_01_M01317 TRANSFAC - 103029105 103029120 5.0E-06 AAAACTCGTAAACAGT 16 V_ZBP89_Q4_M01816 TRANSFAC + 103027929 103027938 2.0E-06 TCCTCCCCCA 10 V_HOXD12_01_M01380 TRANSFAC - 103029104 103029120 9.0E-06 AAAACTCGTAAACAGTT 17 V_AP1_Q4_M00188 TRANSFAC + 103027788 103027798 5.0E-06 ACTGACTAATT 11 V_HOXC11_01_M01329 TRANSFAC - 103029105 103029120 9.0E-06 AAAACTCGTAAACAGT 16 V_SZF11_01_M01109 TRANSFAC - 103034199 103034213 0.0E+00 CCAGGGTAACAGCCA 15 V_HOXD11_01_M01434 TRANSFAC - 103029104 103029120 6.0E-06 AAAACTCGTAAACAGTT 17 V_HOXA11_01_M01378 TRANSFAC - 103029105 103029120 7.0E-06 AAAACTCGTAAACAGT 16 V_PAX8_B_M00328 TRANSFAC + 103029086 103029103 2.0E-06 TCAGAATTGCATGAAGCA 18 V_FAC1_01_M00456 TRANSFAC - 103027148 103027161 2.0E-06 AACCAAAACAAGTT 14 V_FOXJ3_06_M02855 TRANSFAC - 103027147 103027163 7.0E-06 AAAACCAAAACAAGTTG 17 V_FOXJ3_06_M02855 TRANSFAC + 103034155 103034171 1.0E-06 AACAGCAAAACATTGTC 17 V_TITF1_Q3_M00432 TRANSFAC + 103029230 103029239 8.0E-06 ACTCAAGAAT 10 V_FOXO1_04_M01969 TRANSFAC - 103027145 103027164 2.0E-06 GAAAACCAAAACAAGTTGGT 20 V_CTF1_01_M01196 TRANSFAC + 103034244 103034257 2.0E-06 TGGCTGTTTGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR + 103034244 103034257 2.0E-06 TGGCTGTTTGCCAA 14 V_RFX1_02_M00281 TRANSFAC + 103034202 103034219 1.0E-06 CTGTTACCCTGGTAACCA 18 V_NF1_Q6_M00193 TRANSFAC - 103034242 103034259 3.0E-06 GCTTGGCAAACAGCCACT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.